RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.37
CCM2-208ENST00000476594 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
CCM2-208ENST00000476594 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
CCM2-208ENST00000476594 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
CCM2-208ENST00000476594 ERCC6L2Q5T890 1561 aa17.25■□□□□ 0.35
CCM2-208ENST00000476594 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
CCM2-208ENST00000476594 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
CCM2-208ENST00000476594 CARMIL2Q6F5E8 1435 aa17.2■□□□□ 0.34
CCM2-208ENST00000476594 IQGAP2Q13576 1575 aa17.19■□□□□ 0.34
CCM2-208ENST00000476594 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCM2-208ENST00000476594 EEA1Q15075 1411 aa17.13■□□□□ 0.33
CCM2-208ENST00000476594 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
CCM2-208ENST00000476594 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
CCM2-208ENST00000476594 PTPRGP23470 1445 aa17.09■□□□□ 0.33
CCM2-208ENST00000476594 PRXQ9BXM0 1461 aa17.09■□□□□ 0.33
CCM2-208ENST00000476594 CTTNBP2Q8WZ74 1663 aa17.07■□□□□ 0.32
CCM2-208ENST00000476594 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
CCM2-208ENST00000476594 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
CCM2-208ENST00000476594 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
CCM2-208ENST00000476594 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
CCM2-208ENST00000476594 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
CCM2-208ENST00000476594 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
CCM2-208ENST00000476594 ADCY10Q96PN6 1610 aa17.01■□□□□ 0.31
CCM2-208ENST00000476594 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
CCM2-208ENST00000476594 KIAA0556O60303 1618 aa17■□□□□ 0.31
CCM2-208ENST00000476594 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
CCM2-208ENST00000476594 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
CCM2-208ENST00000476594 ABCC2Q92887 1545 aa16.96■□□□□ 0.3
CCM2-208ENST00000476594 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
CCM2-208ENST00000476594 FAM69CQ0P6D2 419 aa16.91■□□□□ 0.3
CCM2-208ENST00000476594 PLB1Q6P1J6 1458 aa16.9■□□□□ 0.3
CCM2-208ENST00000476594 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.29
CCM2-208ENST00000476594 KIF21BO75037 1637 aa16.89■□□□□ 0.29
CCM2-208ENST00000476594 DIP2BQ9P265 1576 aa16.88■□□□□ 0.29
CCM2-208ENST00000476594 KDM5BQ9UGL1 1544 aa16.86■□□□□ 0.29
CCM2-208ENST00000476594 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
CCM2-208ENST00000476594 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
CCM2-208ENST00000476594 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
CCM2-208ENST00000476594 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
CCM2-208ENST00000476594 ABCA8O94911 1581 aa16.81■□□□□ 0.28
CCM2-208ENST00000476594 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
CCM2-208ENST00000476594 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
CCM2-208ENST00000476594 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
CCM2-208ENST00000476594 GLI2P10070 1586 aa16.78■□□□□ 0.28
CCM2-208ENST00000476594 WDR7Q9Y4E6 1490 aa16.76■□□□□ 0.27
CCM2-208ENST00000476594 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
CCM2-208ENST00000476594 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
CCM2-208ENST00000476594 TSPOAP1O95153 1857 aa16.72■□□□□ 0.27
CCM2-208ENST00000476594 RAPGEF6Q8TEU7 1601 aa16.72■□□□□ 0.27
CCM2-208ENST00000476594 TEX14Q8IWB6 1497 aa16.72■□□□□ 0.27
CCM2-208ENST00000476594 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
CCM2-208ENST00000476594 KDM6BO15054 1643 aa16.7■□□□□ 0.26
CCM2-208ENST00000476594 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
CCM2-208ENST00000476594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
CCM2-208ENST00000476594 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
CCM2-208ENST00000476594 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
CCM2-208ENST00000476594 ATP10BO94823 1461 aa16.66■□□□□ 0.26
CCM2-208ENST00000476594 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
CCM2-208ENST00000476594 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
CCM2-208ENST00000476594 ARID3CA6NKF2 412 aa16.64■□□□□ 0.25
CCM2-208ENST00000476594 CFAP43Q8NDM7 1665 aa16.64■□□□□ 0.25
CCM2-208ENST00000476594 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
CCM2-208ENST00000476594 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
CCM2-208ENST00000476594 PPRC1Q5VV67 1664 aaKnown RBP16.61■□□□□ 0.25
CCM2-208ENST00000476594 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
CCM2-208ENST00000476594 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
CCM2-208ENST00000476594 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
CCM2-208ENST00000476594 HECW1Q76N89 1606 aa16.57■□□□□ 0.24
CCM2-208ENST00000476594 ATP1B4Q9UN42 357 aaPredicted RBP16.55■□□□□ 0.24
CCM2-208ENST00000476594 ABCA9Q8IUA7 1624 aa16.55■□□□□ 0.24
CCM2-208ENST00000476594 CDK11AQ9UQ88 783 aaPredicted RBP16.54■□□□□ 0.24
CCM2-208ENST00000476594 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
CCM2-208ENST00000476594 CLIP1P30622 1438 aa16.48■□□□□ 0.23
CCM2-208ENST00000476594 NEO1Q92859 1461 aa16.48■□□□□ 0.23
CCM2-208ENST00000476594 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
CCM2-208ENST00000476594 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
CCM2-208ENST00000476594 COL17A1Q9UMD9 1497 aaPredicted RBP16.45■□□□□ 0.22
CCM2-208ENST00000476594 CFAP74Q9C0B2 1584 aa16.45■□□□□ 0.22
CCM2-208ENST00000476594 ARAP3Q8WWN8 1544 aa16.45■□□□□ 0.22
CCM2-208ENST00000476594 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
CCM2-208ENST00000476594 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
CCM2-208ENST00000476594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCM2-208ENST00000476594 PCF11O94913 1555 aaKnown RBP16.41■□□□□ 0.22
CCM2-208ENST00000476594 KIF14Q15058 1648 aa16.41■□□□□ 0.22
CCM2-208ENST00000476594 TROQ12816 1431 aaPredicted RBP16.4■□□□□ 0.22
CCM2-208ENST00000476594 FANCAO15360 1455 aa16.39■□□□□ 0.21
CCM2-208ENST00000476594 TTC37Q6PGP7 1564 aa16.38■□□□□ 0.21
CCM2-208ENST00000476594 PLCH2O75038 1416 aa16.36■□□□□ 0.21
CCM2-208ENST00000476594 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
CCM2-208ENST00000476594 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
CCM2-208ENST00000476594 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
CCM2-208ENST00000476594 MYO5CQ9NQX4 1742 aa16.34■□□□□ 0.21
CCM2-208ENST00000476594 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
CCM2-208ENST00000476594 LRRIQ1Q96JM4 1722 aa16.31■□□□□ 0.2
CCM2-208ENST00000476594 ADGRL1O94910 1474 aa16.31■□□□□ 0.2
CCM2-208ENST00000476594 RAPGEF3O95398 923 aa16.31■□□□□ 0.2
CCM2-208ENST00000476594 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
CCM2-208ENST00000476594 KDM4FA0A1W2PPD8 638 aa16.29■□□□□ 0.2
CCM2-208ENST00000476594 ILDR1Q86SU0 546 aaPredicted RBP16.29■□□□□ 0.2
CCM2-208ENST00000476594 SCAPERQ9BY12 1400 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms