RNA–Protein interactions for RNA: ENST00000475770.5

KRIT1-221, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 1 (best)

Gene KRIT1, Length 2,411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-221ENST00000475770 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
KRIT1-221ENST00000475770 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
KRIT1-221ENST00000475770 SNAPC4Q5SXM2 1469 aa12.75□□□□□ -0.37
KRIT1-221ENST00000475770 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
KRIT1-221ENST00000475770 KIF21BO75037 1637 aa12.75□□□□□ -0.37
KRIT1-221ENST00000475770 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
KRIT1-221ENST00000475770 CUL7Q14999 1698 aa12.74□□□□□ -0.37
KRIT1-221ENST00000475770 ADAMTS12P58397 1594 aa12.72□□□□□ -0.37
KRIT1-221ENST00000475770 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
KRIT1-221ENST00000475770 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
KRIT1-221ENST00000475770 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
KRIT1-221ENST00000475770 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
KRIT1-221ENST00000475770 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
KRIT1-221ENST00000475770 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
KRIT1-221ENST00000475770 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.38
KRIT1-221ENST00000475770 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
KRIT1-221ENST00000475770 FBLN2P98095 1184 aa12.64□□□□□ -0.39
KRIT1-221ENST00000475770 RANGAP1P46060 587 aaPredicted RBP12.63□□□□□ -0.39
KRIT1-221ENST00000475770 TNIKQ9UKE5 1360 aa12.63□□□□□ -0.39
KRIT1-221ENST00000475770 NUP160Q12769 1436 aa12.57□□□□□ -0.4
KRIT1-221ENST00000475770 CEP170Q5SW79 1584 aa12.57□□□□□ -0.4
KRIT1-221ENST00000475770 CHD1O14646 1710 aa12.57□□□□□ -0.4
KRIT1-221ENST00000475770 CEP162Q5TB80 1403 aa12.56□□□□□ -0.4
KRIT1-221ENST00000475770 CTTNBP2Q8WZ74 1663 aa12.54□□□□□ -0.4
KRIT1-221ENST00000475770 KIAA0586Q9BVV6 1533 aa12.54□□□□□ -0.4
KRIT1-221ENST00000475770 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.4
KRIT1-221ENST00000475770 IQGAP2Q13576 1575 aa12.52□□□□□ -0.4
KRIT1-221ENST00000475770 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.41
KRIT1-221ENST00000475770 CLIP1P30622 1438 aa12.51□□□□□ -0.41
KRIT1-221ENST00000475770 ARHGAP35Q9NRY4 1499 aa12.47□□□□□ -0.41
KRIT1-221ENST00000475770 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
KRIT1-221ENST00000475770 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.41
KRIT1-221ENST00000475770 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
KRIT1-221ENST00000475770 JPH4Q96JJ6 628 aa12.45□□□□□ -0.42
KRIT1-221ENST00000475770 TIMELESSQ9UNS1 1208 aa12.45□□□□□ -0.42
KRIT1-221ENST00000475770 EFCAB5A4FU69 1503 aa12.44□□□□□ -0.42
KRIT1-221ENST00000475770 SAMD9Q5K651 1589 aa12.44□□□□□ -0.42
KRIT1-221ENST00000475770 ARAP1Q96P48 1450 aa12.43□□□□□ -0.42
KRIT1-221ENST00000475770 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
KRIT1-221ENST00000475770 DISP1Q96F81 1524 aa12.43□□□□□ -0.42
KRIT1-221ENST00000475770 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
KRIT1-221ENST00000475770 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
KRIT1-221ENST00000475770 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
KRIT1-221ENST00000475770 KIAA0556O60303 1618 aa12.4□□□□□ -0.42
KRIT1-221ENST00000475770 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
KRIT1-221ENST00000475770 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
KRIT1-221ENST00000475770 ERCC6L2Q5T890 1561 aa12.36□□□□□ -0.43
KRIT1-221ENST00000475770 HOMEZQ8IX15 550 aa12.35□□□□□ -0.43
KRIT1-221ENST00000475770 FMN1Q68DA7 1419 aa12.33□□□□□ -0.43
KRIT1-221ENST00000475770 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
KRIT1-221ENST00000475770 PCF11O94913 1555 aaKnown RBP12.3□□□□□ -0.44
KRIT1-221ENST00000475770 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
KRIT1-221ENST00000475770 PTPRGP23470 1445 aa12.29□□□□□ -0.44
KRIT1-221ENST00000475770 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
KRIT1-221ENST00000475770 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
KRIT1-221ENST00000475770 FYCO1Q9BQS8 1478 aa12.28□□□□□ -0.44
KRIT1-221ENST00000475770 ARHGEF11O15085 1522 aa12.26□□□□□ -0.45
KRIT1-221ENST00000475770 ATP1B4Q9UN42 357 aaPredicted RBP12.26□□□□□ -0.45
KRIT1-221ENST00000475770 RAPGEF6Q8TEU7 1601 aa12.24□□□□□ -0.45
KRIT1-221ENST00000475770 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
KRIT1-221ENST00000475770 ABCA8O94911 1581 aa12.23□□□□□ -0.45
KRIT1-221ENST00000475770 NUP153P49790 1475 aaKnown RBP12.23□□□□□ -0.45
KRIT1-221ENST00000475770 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
KRIT1-221ENST00000475770 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
KRIT1-221ENST00000475770 ARID3CA6NKF2 412 aa12.21□□□□□ -0.46
KRIT1-221ENST00000475770 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.46
KRIT1-221ENST00000475770 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.46
KRIT1-221ENST00000475770 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.46
KRIT1-221ENST00000475770 EPRSP07814 1512 aaKnown RBP12.2□□□□□ -0.46
KRIT1-221ENST00000475770 PPARGC1BQ86YN6 1023 aaKnown RBP12.19□□□□□ -0.46
KRIT1-221ENST00000475770 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
KRIT1-221ENST00000475770 TIAM1Q13009 1591 aa12.19□□□□□ -0.46
KRIT1-221ENST00000475770 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
KRIT1-221ENST00000475770 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
KRIT1-221ENST00000475770 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
KRIT1-221ENST00000475770 MAP3K1Q13233 1512 aa12.18□□□□□ -0.46
KRIT1-221ENST00000475770 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
KRIT1-221ENST00000475770 KANK4Q5T7N3 995 aaPredicted RBP12.17□□□□□ -0.46
KRIT1-221ENST00000475770 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
KRIT1-221ENST00000475770 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
KRIT1-221ENST00000475770 ADCY10Q96PN6 1610 aa12.15□□□□□ -0.46
KRIT1-221ENST00000475770 ATP10BO94823 1461 aa12.15□□□□□ -0.46
KRIT1-221ENST00000475770 CYB5RLQ6IPT4 315 aa12.15□□□□□ -0.46
KRIT1-221ENST00000475770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.47
KRIT1-221ENST00000475770 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.47
KRIT1-221ENST00000475770 PODXL2Q9NZ53 605 aa12.15□□□□□ -0.47
KRIT1-221ENST00000475770 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
KRIT1-221ENST00000475770 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
KRIT1-221ENST00000475770 KDM5BQ9UGL1 1544 aa12.12□□□□□ -0.47
KRIT1-221ENST00000475770 MTUS2Q5JR59 1369 aa12.12□□□□□ -0.47
KRIT1-221ENST00000475770 ZCCHC11Q5TAX3 1644 aaKnown RBP12.1□□□□□ -0.47
KRIT1-221ENST00000475770 EHBP1L1Q8N3D4 1523 aa12.09□□□□□ -0.47
KRIT1-221ENST00000475770 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
KRIT1-221ENST00000475770 UBE2Q2Q8WVN8 375 aa12.09□□□□□ -0.47
KRIT1-221ENST00000475770 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
KRIT1-221ENST00000475770 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
KRIT1-221ENST00000475770 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
KRIT1-221ENST00000475770 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
KRIT1-221ENST00000475770 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
KRIT1-221ENST00000475770 KCNA4P22459 653 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms