RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
SRM-204ENST00000475189 KIAA0586Q9BVV6 1533 aa27.25■■□□□ 1.95
SRM-204ENST00000475189 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
SRM-204ENST00000475189 JPH4Q96JJ6 628 aa27.23■■□□□ 1.95
SRM-204ENST00000475189 PRXQ9BXM0 1461 aa27.2■■□□□ 1.95
SRM-204ENST00000475189 EEA1Q15075 1411 aa27.19■■□□□ 1.94
SRM-204ENST00000475189 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
SRM-204ENST00000475189 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
SRM-204ENST00000475189 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
SRM-204ENST00000475189 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
SRM-204ENST00000475189 CTTNBP2Q8WZ74 1663 aa27.06■■□□□ 1.92
SRM-204ENST00000475189 UGGT2Q9NYU1 1516 aa26.96■■□□□ 1.91
SRM-204ENST00000475189 KIF21BO75037 1637 aa26.94■■□□□ 1.9
SRM-204ENST00000475189 CARMIL2Q6F5E8 1435 aa26.94■■□□□ 1.9
SRM-204ENST00000475189 DISP1Q96F81 1524 aa26.93■■□□□ 1.9
SRM-204ENST00000475189 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
SRM-204ENST00000475189 KIAA0556O60303 1618 aa26.86■■□□□ 1.89
SRM-204ENST00000475189 PTPRGP23470 1445 aa26.84■■□□□ 1.89
SRM-204ENST00000475189 GOLGA3Q08378 1498 aa26.8■■□□□ 1.88
SRM-204ENST00000475189 TTBK1Q5TCY1 1321 aaPredicted RBP26.79■■□□□ 1.88
SRM-204ENST00000475189 ADCY10Q96PN6 1610 aa26.78■■□□□ 1.88
SRM-204ENST00000475189 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
SRM-204ENST00000475189 SAMD9Q5K651 1589 aa26.7■■□□□ 1.86
SRM-204ENST00000475189 UBTFP17480 764 aaKnown RBP26.69■■□□□ 1.86
SRM-204ENST00000475189 TRHP20396 242 aaPredicted RBP26.68■■□□□ 1.86
SRM-204ENST00000475189 UACAQ9BZF9 1416 aa26.67■■□□□ 1.86
SRM-204ENST00000475189 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
SRM-204ENST00000475189 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
SRM-204ENST00000475189 UHRF1BP1LA0JNW5 1464 aa26.65■■□□□ 1.86
SRM-204ENST00000475189 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.86
SRM-204ENST00000475189 ABCC2Q92887 1545 aa26.63■■□□□ 1.85
SRM-204ENST00000475189 PLB1Q6P1J6 1458 aa26.58■■□□□ 1.85
SRM-204ENST00000475189 MAPKBP1O60336 1514 aa26.58■■□□□ 1.85
SRM-204ENST00000475189 ABCA8O94911 1581 aa26.57■■□□□ 1.84
SRM-204ENST00000475189 EFCAB5A4FU69 1503 aa26.55■■□□□ 1.84
SRM-204ENST00000475189 KDM5BQ9UGL1 1544 aa26.53■■□□□ 1.84
SRM-204ENST00000475189 FHOD3Q2V2M9 1422 aa26.52■■□□□ 1.84
SRM-204ENST00000475189 KIF13AQ9H1H9 1805 aa26.51■■□□□ 1.83
SRM-204ENST00000475189 ZCCHC11Q5TAX3 1644 aaKnown RBP26.49■■□□□ 1.83
SRM-204ENST00000475189 ABCC10Q5T3U5 1492 aa26.45■■□□□ 1.82
SRM-204ENST00000475189 ARHGAP35Q9NRY4 1499 aa26.45■■□□□ 1.82
SRM-204ENST00000475189 ASXL2Q76L83 1435 aa26.44■■□□□ 1.82
SRM-204ENST00000475189 RAPGEF6Q8TEU7 1601 aa26.43■■□□□ 1.82
SRM-204ENST00000475189 DIP2BQ9P265 1576 aa26.43■■□□□ 1.82
SRM-204ENST00000475189 FAM69CQ0P6D2 419 aa26.39■■□□□ 1.82
SRM-204ENST00000475189 ATP10BO94823 1461 aa26.35■■□□□ 1.81
SRM-204ENST00000475189 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
SRM-204ENST00000475189 ARID3CA6NKF2 412 aa26.32■■□□□ 1.8
SRM-204ENST00000475189 FMN1Q68DA7 1419 aa26.31■■□□□ 1.8
SRM-204ENST00000475189 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
SRM-204ENST00000475189 EPRSP07814 1512 aaKnown RBP26.29■■□□□ 1.8
SRM-204ENST00000475189 GLI2P10070 1586 aa26.29■■□□□ 1.8
SRM-204ENST00000475189 LOC105371045A0A1W2PR82 267 aa26.28■■□□□ 1.8
SRM-204ENST00000475189 CLIP1P30622 1438 aa26.28■■□□□ 1.8
SRM-204ENST00000475189 TSPOAP1O95153 1857 aa26.25■■□□□ 1.79
SRM-204ENST00000475189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.78
SRM-204ENST00000475189 HNRNPUL2Q1KMD3 747 aaKnown RBP26.2■■□□□ 1.78
SRM-204ENST00000475189 HECW1Q76N89 1606 aa26.19■■□□□ 1.78
SRM-204ENST00000475189 KCNH8Q96L42 1107 aa26.19■■□□□ 1.78
SRM-204ENST00000475189 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
SRM-204ENST00000475189 MAP3K4Q9Y6R4 1608 aa26.17■■□□□ 1.78
SRM-204ENST00000475189 PPRC1Q5VV67 1664 aaKnown RBP26.16■■□□□ 1.78
SRM-204ENST00000475189 CDK13Q14004 1512 aaKnown RBP26.15■■□□□ 1.78
SRM-204ENST00000475189 ATP1B4Q9UN42 357 aaPredicted RBP26.15■■□□□ 1.78
SRM-204ENST00000475189 LRRIQ1Q96JM4 1722 aa26.13■■□□□ 1.77
SRM-204ENST00000475189 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
SRM-204ENST00000475189 CFAP43Q8NDM7 1665 aa26.12■■□□□ 1.77
SRM-204ENST00000475189 CASKIN1Q8WXD9 1431 aa26.11■■□□□ 1.77
SRM-204ENST00000475189 PLEKHD1A6NEE1 506 aa26.1■■□□□ 1.77
SRM-204ENST00000475189 ABCA9Q8IUA7 1624 aa26.06■■□□□ 1.76
SRM-204ENST00000475189 CD109Q6YHK3 1445 aa26.05■■□□□ 1.76
SRM-204ENST00000475189 FYCO1Q9BQS8 1478 aa26.05■■□□□ 1.76
SRM-204ENST00000475189 MAGI3Q5TCQ9 1506 aa26.01■■□□□ 1.75
SRM-204ENST00000475189 TEX14Q8IWB6 1497 aa26.01■■□□□ 1.75
SRM-204ENST00000475189 CCDC18Q5T9S5 1454 aa25.99■■□□□ 1.75
SRM-204ENST00000475189 CDK11AQ9UQ88 783 aaPredicted RBP25.99■■□□□ 1.75
SRM-204ENST00000475189 KDM6BO15054 1643 aa25.99■■□□□ 1.75
SRM-204ENST00000475189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.95■■□□□ 1.74
SRM-204ENST00000475189 TROQ12816 1431 aaPredicted RBP25.93■■□□□ 1.74
SRM-204ENST00000475189 TTC37Q6PGP7 1564 aa25.91■■□□□ 1.74
SRM-204ENST00000475189 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
SRM-204ENST00000475189 COL17A1Q9UMD9 1497 aaPredicted RBP25.89■■□□□ 1.73
SRM-204ENST00000475189 KIF14Q15058 1648 aa25.88■■□□□ 1.73
SRM-204ENST00000475189 VPS8Q8N3P4 1428 aa25.86■■□□□ 1.73
SRM-204ENST00000475189 NEO1Q92859 1461 aa25.81■■□□□ 1.72
SRM-204ENST00000475189 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
SRM-204ENST00000475189 MYO5CQ9NQX4 1742 aa25.8■■□□□ 1.72
SRM-204ENST00000475189 ARAP3Q8WWN8 1544 aa25.79■■□□□ 1.72
SRM-204ENST00000475189 PLCH2O75038 1416 aa25.78■■□□□ 1.72
SRM-204ENST00000475189 FANCAO15360 1455 aa25.76■■□□□ 1.71
SRM-204ENST00000475189 CFAP74Q9C0B2 1584 aa25.76■■□□□ 1.71
SRM-204ENST00000475189 AKNAQ7Z591 1439 aa25.73■■□□□ 1.71
SRM-204ENST00000475189 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
SRM-204ENST00000475189 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
SRM-204ENST00000475189 TIAM1Q13009 1591 aa25.71■■□□□ 1.71
SRM-204ENST00000475189 EHBP1L1Q8N3D4 1523 aa25.69■■□□□ 1.7
SRM-204ENST00000475189 CDC42BPAQ5VT25 1732 aa25.68■■□□□ 1.7
SRM-204ENST00000475189 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
SRM-204ENST00000475189 EFCAB2Q5VUJ9 269 aa25.68■■□□□ 1.7
SRM-204ENST00000475189 RAPGEF3O95398 923 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms