RNA–Protein interactions for RNA: ENST00000474783.2

PAX6-216, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 4,392 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-216ENST00000474783 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
PAX6-216ENST00000474783 ARXQ96QS3 562 aa11.45□□□□□ -0.58
PAX6-216ENST00000474783 CTTNBP2Q8WZ74 1663 aa11.45□□□□□ -0.58
PAX6-216ENST00000474783 ITGAEP38570 1179 aa11.43□□□□□ -0.58
PAX6-216ENST00000474783 TIAM1Q13009 1591 aa11.43□□□□□ -0.58
PAX6-216ENST00000474783 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
PAX6-216ENST00000474783 CUL7Q14999 1698 aa11.42□□□□□ -0.58
PAX6-216ENST00000474783 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
PAX6-216ENST00000474783 ZNF326Q5BKZ1 582 aaKnown RBP11.41□□□□□ -0.58
PAX6-216ENST00000474783 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
PAX6-216ENST00000474783 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
PAX6-216ENST00000474783 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
PAX6-216ENST00000474783 TULP1O00294 542 aaPredicted RBP11.38□□□□□ -0.59
PAX6-216ENST00000474783 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
PAX6-216ENST00000474783 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
PAX6-216ENST00000474783 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
PAX6-216ENST00000474783 SAMD9Q5K651 1589 aa11.36□□□□□ -0.59
PAX6-216ENST00000474783 C14orf37Q86TY3 774 aa11.36□□□□□ -0.59
PAX6-216ENST00000474783 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
PAX6-216ENST00000474783 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
PAX6-216ENST00000474783 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
PAX6-216ENST00000474783 CDK11BP21127 795 aaKnown RBP11.35□□□□□ -0.59
PAX6-216ENST00000474783 CDK11AQ9UQ88 783 aaPredicted RBP11.35□□□□□ -0.59
PAX6-216ENST00000474783 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.59
PAX6-216ENST00000474783 IGF1RP08069 1367 aa11.34□□□□□ -0.59
PAX6-216ENST00000474783 PCF11O94913 1555 aaKnown RBP11.34□□□□□ -0.59
PAX6-216ENST00000474783 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
PAX6-216ENST00000474783 LAMC3Q9Y6N6 1575 aa11.32□□□□□ -0.6
PAX6-216ENST00000474783 MAPKBP1O60336 1514 aa11.32□□□□□ -0.6
PAX6-216ENST00000474783 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
PAX6-216ENST00000474783 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
PAX6-216ENST00000474783 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
PAX6-216ENST00000474783 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.61
PAX6-216ENST00000474783 LRRC9Q6ZRR7 1453 aa11.27□□□□□ -0.61
PAX6-216ENST00000474783 FYCO1Q9BQS8 1478 aa11.27□□□□□ -0.61
PAX6-216ENST00000474783 FANCD2Q9BXW9 1451 aa11.27□□□□□ -0.61
PAX6-216ENST00000474783 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
PAX6-216ENST00000474783 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
PAX6-216ENST00000474783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
PAX6-216ENST00000474783 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
PAX6-216ENST00000474783 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
PAX6-216ENST00000474783 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
PAX6-216ENST00000474783 BCANQ96GW7 911 aa11.23□□□□□ -0.61
PAX6-216ENST00000474783 DNAJC5BQ9UF47 199 aa11.23□□□□□ -0.61
PAX6-216ENST00000474783 PBRM1Q86U86 1689 aa11.23□□□□□ -0.61
PAX6-216ENST00000474783 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
PAX6-216ENST00000474783 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
PAX6-216ENST00000474783 HMGB1P09429 215 aaKnown RBP11.22□□□□□ -0.61
PAX6-216ENST00000474783 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.61
PAX6-216ENST00000474783 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.62
PAX6-216ENST00000474783 CCNB3Q8WWL7 1395 aa11.2□□□□□ -0.62
PAX6-216ENST00000474783 CASKIN1Q8WXD9 1431 aa11.19□□□□□ -0.62
PAX6-216ENST00000474783 PKNOX2Q96KN3 472 aa11.19□□□□□ -0.62
PAX6-216ENST00000474783 CARMIL1Q5VZK9 1371 aa11.19□□□□□ -0.62
PAX6-216ENST00000474783 SLC4A1APQ9BWU0 796 aaKnown RBP11.18□□□□□ -0.62
PAX6-216ENST00000474783 NEUROD1Q13562 356 aa11.18□□□□□ -0.62
PAX6-216ENST00000474783 GCC2Q8IWJ2 1684 aa11.18□□□□□ -0.62
PAX6-216ENST00000474783 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
PAX6-216ENST00000474783 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
PAX6-216ENST00000474783 FHAD1B1AJZ9 1412 aa11.17□□□□□ -0.62
PAX6-216ENST00000474783 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
PAX6-216ENST00000474783 NCLP19338 710 aaKnown RBP11.17□□□□□ -0.62
PAX6-216ENST00000474783 ANP32EQ9BTT0 268 aa11.16□□□□□ -0.62
PAX6-216ENST00000474783 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
PAX6-216ENST00000474783 PDE4CQ08493 712 aa11.14□□□□□ -0.63
PAX6-216ENST00000474783 TPRNQ4KMQ1 711 aa11.14□□□□□ -0.63
PAX6-216ENST00000474783 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
PAX6-216ENST00000474783 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
PAX6-216ENST00000474783 NESP48681 1621 aa11.13□□□□□ -0.63
PAX6-216ENST00000474783 ADAMTS12P58397 1594 aa11.13□□□□□ -0.63
PAX6-216ENST00000474783 PTMSP20962 102 aa11.11□□□□□ -0.63
PAX6-216ENST00000474783 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
PAX6-216ENST00000474783 HECW1Q76N89 1606 aa11.11□□□□□ -0.63
PAX6-216ENST00000474783 PTPN23Q9H3S7 1636 aa11.11□□□□□ -0.63
PAX6-216ENST00000474783 UGGT2Q9NYU1 1516 aa11.11□□□□□ -0.63
PAX6-216ENST00000474783 SUPT6HQ7KZ85 1726 aaKnown RBP11.1□□□□□ -0.63
PAX6-216ENST00000474783 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
PAX6-216ENST00000474783 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
PAX6-216ENST00000474783 EHBP1L1Q8N3D4 1523 aa11.09□□□□□ -0.63
PAX6-216ENST00000474783 RAB3GAP2Q9H2M9 1393 aa11.07□□□□□ -0.64
PAX6-216ENST00000474783 FAM50AQ14320 339 aaKnown RBP11.07□□□□□ -0.64
PAX6-216ENST00000474783 SETD5Q9C0A6 1442 aa11.06□□□□□ -0.64
PAX6-216ENST00000474783 POLR1AO95602 1720 aaPredicted RBP11.05□□□□□ -0.64
PAX6-216ENST00000474783 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
PAX6-216ENST00000474783 A0A0U1RQG5 324 aaPredicted RBP11.05□□□□□ -0.64
PAX6-216ENST00000474783 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
PAX6-216ENST00000474783 WDR62O43379 1518 aa11.05□□□□□ -0.64
PAX6-216ENST00000474783 AKNAQ7Z591 1439 aa11.05□□□□□ -0.64
PAX6-216ENST00000474783 FMN1Q68DA7 1419 aa11.04□□□□□ -0.64
PAX6-216ENST00000474783 DENND4BO75064 1496 aaPredicted RBP11.04□□□□□ -0.64
PAX6-216ENST00000474783 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
PAX6-216ENST00000474783 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
PAX6-216ENST00000474783 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
PAX6-216ENST00000474783 FHOD3Q2V2M9 1422 aa11.04□□□□□ -0.64
PAX6-216ENST00000474783 ERCC6Q03468 1493 aa11.03□□□□□ -0.64
PAX6-216ENST00000474783 FGD6Q6ZV73 1430 aa11.03□□□□□ -0.64
PAX6-216ENST00000474783 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
PAX6-216ENST00000474783 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
PAX6-216ENST00000474783 HFM1A2PYH4 1435 aa11.02□□□□□ -0.64
PAX6-216ENST00000474783 ADCY10Q96PN6 1610 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms