RNA–Protein interactions for RNA: ENST00000474640.1

RPL35A-207, Transcript of ribosomal protein L35a, humanhuman

TSL 2

Gene RPL35A, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-207ENST00000474640 EVX2Q03828 476 aa12.13□□□□□ -0.47
RPL35A-207ENST00000474640 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
RPL35A-207ENST00000474640 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
RPL35A-207ENST00000474640 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
RPL35A-207ENST00000474640 CEP164Q9UPV0 1460 aa12.07□□□□□ -0.48
RPL35A-207ENST00000474640 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
RPL35A-207ENST00000474640 MRC2Q9UBG0 1479 aa12.01□□□□□ -0.49
RPL35A-207ENST00000474640 ABCC8Q09428 1581 aa11.99□□□□□ -0.49
RPL35A-207ENST00000474640 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
RPL35A-207ENST00000474640 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
RPL35A-207ENST00000474640 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
RPL35A-207ENST00000474640 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
RPL35A-207ENST00000474640 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
RPL35A-207ENST00000474640 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.5
RPL35A-207ENST00000474640 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
RPL35A-207ENST00000474640 WDR62O43379 1518 aa11.94□□□□□ -0.5
RPL35A-207ENST00000474640 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
RPL35A-207ENST00000474640 DNMBPQ6XZF7 1577 aa11.93□□□□□ -0.5
RPL35A-207ENST00000474640 CUX1P39880 1505 aa11.91□□□□□ -0.5
RPL35A-207ENST00000474640 CUX2O14529 1486 aa11.9□□□□□ -0.5
RPL35A-207ENST00000474640 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
RPL35A-207ENST00000474640 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
RPL35A-207ENST00000474640 FBLN2P98095 1184 aa11.88□□□□□ -0.51
RPL35A-207ENST00000474640 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
RPL35A-207ENST00000474640 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
RPL35A-207ENST00000474640 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
RPL35A-207ENST00000474640 LHX8Q68G74 356 aa11.86□□□□□ -0.51
RPL35A-207ENST00000474640 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
RPL35A-207ENST00000474640 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
RPL35A-207ENST00000474640 FGD5Q6ZNL6 1462 aa11.85□□□□□ -0.51
RPL35A-207ENST00000474640 GABBR2O75899 941 aa11.85□□□□□ -0.51
RPL35A-207ENST00000474640 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
RPL35A-207ENST00000474640 SOGA1O94964 1423 aa11.85□□□□□ -0.51
RPL35A-207ENST00000474640 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
RPL35A-207ENST00000474640 RAD54L2Q9Y4B4 1467 aa11.81□□□□□ -0.52
RPL35A-207ENST00000474640 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
RPL35A-207ENST00000474640 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
RPL35A-207ENST00000474640 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
RPL35A-207ENST00000474640 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
RPL35A-207ENST00000474640 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
RPL35A-207ENST00000474640 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
RPL35A-207ENST00000474640 AQRO60306 1485 aaKnown RBP eCLIP11.72□□□□□ -0.534e-14■□□□□ 10.3
RPL35A-207ENST00000474640 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
RPL35A-207ENST00000474640 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
RPL35A-207ENST00000474640 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
RPL35A-207ENST00000474640 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
RPL35A-207ENST00000474640 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
RPL35A-207ENST00000474640 GRIN2BQ13224 1484 aa11.66□□□□□ -0.54
RPL35A-207ENST00000474640 EIF4G3O43432 1585 aaKnown RBP11.66□□□□□ -0.54
RPL35A-207ENST00000474640 ABCA5Q8WWZ7 1642 aa11.64□□□□□ -0.55
RPL35A-207ENST00000474640 IGF1RP08069 1367 aa11.64□□□□□ -0.55
RPL35A-207ENST00000474640 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
RPL35A-207ENST00000474640 RUSC2Q8N2Y8 1516 aa11.63□□□□□ -0.55
RPL35A-207ENST00000474640 EEA1Q15075 1411 aa11.62□□□□□ -0.55
RPL35A-207ENST00000474640 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
RPL35A-207ENST00000474640 MAGI1Q96QZ7 1491 aaPredicted RBP11.6□□□□□ -0.55
RPL35A-207ENST00000474640 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
RPL35A-207ENST00000474640 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
RPL35A-207ENST00000474640 SPDYE4A6NLX3 237 aa11.58□□□□□ -0.56
RPL35A-207ENST00000474640 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
RPL35A-207ENST00000474640 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
RPL35A-207ENST00000474640 CARMIL1Q5VZK9 1371 aa11.57□□□□□ -0.56
RPL35A-207ENST00000474640 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
RPL35A-207ENST00000474640 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
RPL35A-207ENST00000474640 FHAD1B1AJZ9 1412 aa11.57□□□□□ -0.56
RPL35A-207ENST00000474640 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
RPL35A-207ENST00000474640 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
RPL35A-207ENST00000474640 PLSCR2Q9NRY7 297 aa11.54□□□□□ -0.56
RPL35A-207ENST00000474640 CUL7Q14999 1698 aa11.52□□□□□ -0.56
RPL35A-207ENST00000474640 CLCN6P51797 869 aa11.52□□□□□ -0.57
RPL35A-207ENST00000474640 ADAMTS12P58397 1594 aa11.52□□□□□ -0.57
RPL35A-207ENST00000474640 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
RPL35A-207ENST00000474640 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
RPL35A-207ENST00000474640 GRIN2AQ12879 1464 aa11.5□□□□□ -0.57
RPL35A-207ENST00000474640 PROM2Q8N271 834 aa11.49□□□□□ -0.57
RPL35A-207ENST00000474640 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
RPL35A-207ENST00000474640 CHD1O14646 1710 aa11.46□□□□□ -0.58
RPL35A-207ENST00000474640 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
RPL35A-207ENST00000474640 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
RPL35A-207ENST00000474640 NUP160Q12769 1436 aa11.44□□□□□ -0.58
RPL35A-207ENST00000474640 KIF21BO75037 1637 aa11.43□□□□□ -0.58
RPL35A-207ENST00000474640 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
RPL35A-207ENST00000474640 GOLGA3Q08378 1498 aa11.41□□□□□ -0.58
RPL35A-207ENST00000474640 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
RPL35A-207ENST00000474640 KIAA0586Q9BVV6 1533 aa11.4□□□□□ -0.58
RPL35A-207ENST00000474640 CEP170Q5SW79 1584 aa11.4□□□□□ -0.58
RPL35A-207ENST00000474640 LOC105371045A0A1W2PR82 267 aa11.38□□□□□ -0.59
RPL35A-207ENST00000474640 JPH4Q96JJ6 628 aa11.38□□□□□ -0.59
RPL35A-207ENST00000474640 CLASP1Q7Z460 1538 aa11.37□□□□□ -0.59
RPL35A-207ENST00000474640 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
RPL35A-207ENST00000474640 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
RPL35A-207ENST00000474640 TNIKQ9UKE5 1360 aa11.34□□□□□ -0.59
RPL35A-207ENST00000474640 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
RPL35A-207ENST00000474640 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
RPL35A-207ENST00000474640 ZRANB1Q9UGI0 708 aa11.31□□□□□ -0.6
RPL35A-207ENST00000474640 PRG4Q92954 1404 aaPredicted RBP11.31□□□□□ -0.6
RPL35A-207ENST00000474640 CTTNBP2Q8WZ74 1663 aa11.3□□□□□ -0.6
RPL35A-207ENST00000474640 SHROOM2Q13796 1616 aa11.3□□□□□ -0.6
RPL35A-207ENST00000474640 UGGT2Q9NYU1 1516 aa11.3□□□□□ -0.6
RPL35A-207ENST00000474640 CARMIL2Q6F5E8 1435 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms