RNA–Protein interactions for RNA: ENST00000474387.1

AC055731.1-201, humanhuman

BASIC

Gene AC055731.1, Length 401 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055731.1-201ENST00000474387 MYCNP04198 464 aaPredicted RBP3.51□□□□□ -1.85
AC055731.1-201ENST00000474387 TRIM26Q12899 539 aaPredicted RBP3.51□□□□□ -1.85
AC055731.1-201ENST00000474387 PKD2Q13563 968 aa3.51□□□□□ -1.85
AC055731.1-201ENST00000474387 VASPP50552 380 aaPredicted RBP3.5□□□□□ -1.85
AC055731.1-201ENST00000474387 UBTFP17480 764 aaKnown RBP3.49□□□□□ -1.85
AC055731.1-201ENST00000474387 ZBTB12Q9Y330 459 aaPredicted RBP3.49□□□□□ -1.85
AC055731.1-201ENST00000474387 NPM1P06748 294 aaKnown RBP eCLIP3.48□□□□□ -1.85
AC055731.1-201ENST00000474387 POTEIP0CG38 1075 aa3.47□□□□□ -1.85
AC055731.1-201ENST00000474387 PCDH10Q9P2E7 1040 aa3.47□□□□□ -1.85
AC055731.1-201ENST00000474387 ECM2O94769 699 aaPredicted RBP3.46□□□□□ -1.86
AC055731.1-201ENST00000474387 IFNLR1Q8IU57 520 aaPredicted RBP3.46□□□□□ -1.86
AC055731.1-201ENST00000474387 POTEMA6NI47 508 aa3.45□□□□□ -1.86
AC055731.1-201ENST00000474387 EIF5BO60841 1220 aaKnown RBP3.45□□□□□ -1.86
AC055731.1-201ENST00000474387 OSCARQ8IYS5 282 aa3.45□□□□□ -1.86
AC055731.1-201ENST00000474387 PRKAR2AP13861 404 aaKnown RBP3.44□□□□□ -1.86
AC055731.1-201ENST00000474387 HRCP23327 699 aa3.44□□□□□ -1.86
AC055731.1-201ENST00000474387 CCDC9Q9Y3X0 531 aaKnown RBP3.44□□□□□ -1.86
AC055731.1-201ENST00000474387 ZBTB7CA1YPR0 619 aa3.42□□□□□ -1.86
AC055731.1-201ENST00000474387 CLCN6P51797 869 aa3.42□□□□□ -1.86
AC055731.1-201ENST00000474387 POTEGQ6S5H5 508 aa3.42□□□□□ -1.86
AC055731.1-201ENST00000474387 DNAJC5Q9H3Z4 198 aa3.42□□□□□ -1.86
AC055731.1-201ENST00000474387 SPDYE4A6NLX3 237 aa3.41□□□□□ -1.86
AC055731.1-201ENST00000474387 CHGAP10645 457 aaKnown RBP3.41□□□□□ -1.86
AC055731.1-201ENST00000474387 ARID3AQ99856 593 aa3.41□□□□□ -1.86
AC055731.1-201ENST00000474387 OTUD5Q96G74 571 aa3.4□□□□□ -1.87
AC055731.1-201ENST00000474387 BRPF1P55201 1214 aaPredicted RBP3.39□□□□□ -1.87
AC055731.1-201ENST00000474387 SPOCK2Q92563 424 aa3.39□□□□□ -1.87
AC055731.1-201ENST00000474387 RGL2O15211 777 aa3.38□□□□□ -1.87
AC055731.1-201ENST00000474387 NEUROD2Q15784 382 aa3.38□□□□□ -1.87
AC055731.1-201ENST00000474387 RSPH6AQ9H0K4 717 aa3.38□□□□□ -1.87
AC055731.1-201ENST00000474387 HMGB1P09429 215 aaKnown RBP3.37□□□□□ -1.87
AC055731.1-201ENST00000474387 PDIA4P13667 645 aaKnown RBP3.37□□□□□ -1.87
AC055731.1-201ENST00000474387 SHROOM4Q9ULL8 1493 aa3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 SPDYE2BA6NHP3 402 aa3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 SPDYE6P0CI01 402 aa3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 CDK11BP21127 795 aaKnown RBP3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 SPDYE2Q495Y8 402 aa3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 SPDYE1Q8NFV5 336 aaPredicted RBP3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 ZMYND15Q9H091 742 aa3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 CDK11AQ9UQ88 783 aaPredicted RBP3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 ATF5Q9Y2D1 282 aaPredicted RBP3.36□□□□□ -1.87
AC055731.1-201ENST00000474387 LOC105371045A0A1W2PR82 267 aa3.34□□□□□ -1.87
AC055731.1-201ENST00000474387 POTEB2H3BUK9 544 aa3.34□□□□□ -1.87
AC055731.1-201ENST00000474387 LMOD2Q6P5Q4 547 aa3.34□□□□□ -1.87
AC055731.1-201ENST00000474387 PROM2Q8N271 834 aa3.33□□□□□ -1.88
AC055731.1-201ENST00000474387 DCBLD2Q96PD2 775 aa3.33□□□□□ -1.88
AC055731.1-201ENST00000474387 LCE2DQ5TA82 110 aaPredicted RBP3.32□□□□□ -1.88
AC055731.1-201ENST00000474387 P3H3Q8IVL6 736 aa3.32□□□□□ -1.88
AC055731.1-201ENST00000474387 HSP90B1P14625 803 aaKnown RBP3.31□□□□□ -1.88
AC055731.1-201ENST00000474387 CD44P16070 742 aaKnown RBP3.31□□□□□ -1.88
AC055731.1-201ENST00000474387 CLEC11AQ9Y240 323 aa3.31□□□□□ -1.88
AC055731.1-201ENST00000474387 CHADLQ6NUI6 762 aa3.3□□□□□ -1.88
AC055731.1-201ENST00000474387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.3□□□□□ -1.88
AC055731.1-201ENST00000474387 HS6ST3Q8IZP7 471 aa3.3□□□□□ -1.88
AC055731.1-201ENST00000474387 CIZ1Q9ULV3 898 aaPredicted RBP3.3□□□□□ -1.88
AC055731.1-201ENST00000474387 APBB1O00213 710 aa3.29□□□□□ -1.88
AC055731.1-201ENST00000474387 KCTD17Q8N5Z5 321 aa3.29□□□□□ -1.88
AC055731.1-201ENST00000474387 ZNF579Q8NAF0 562 aaKnown RBP3.29□□□□□ -1.88
AC055731.1-201ENST00000474387 RAD21O60216 631 aa3.28□□□□□ -1.88
AC055731.1-201ENST00000474387 IGSF3O75054 1194 aa3.28□□□□□ -1.88
AC055731.1-201ENST00000474387 PLCD3Q8N3E9 789 aa3.28□□□□□ -1.88
AC055731.1-201ENST00000474387 NECTIN2Q92692 538 aa3.28□□□□□ -1.88
AC055731.1-201ENST00000474387 SLC24A3Q9HC58 644 aa3.28□□□□□ -1.88
AC055731.1-201ENST00000474387 SSUH2Q9Y2M2 353 aa3.28□□□□□ -1.88
AC055731.1-201ENST00000474387 ARID3CA6NKF2 412 aa3.27□□□□□ -1.89
AC055731.1-201ENST00000474387 C1orf115Q9H7X2 142 aa3.27□□□□□ -1.89
AC055731.1-201ENST00000474387 WDR70Q9NW82 654 aa3.27□□□□□ -1.89
AC055731.1-201ENST00000474387 ZC3H15Q8WU90 426 aaKnown RBP3.26□□□□□ -1.89
AC055731.1-201ENST00000474387 FARP1Q9Y4F1 1045 aaPredicted RBP3.26□□□□□ -1.89
AC055731.1-201ENST00000474387 GTPBP6O43824 516 aaPredicted RBP3.25□□□□□ -1.89
AC055731.1-201ENST00000474387 RBM25P49756 843 aaKnown RBP3.25□□□□□ -1.89
AC055731.1-201ENST00000474387 PUS7Q96PZ0 661 aaKnown RBP3.25□□□□□ -1.89
AC055731.1-201ENST00000474387 GALR2O43603 387 aaPredicted RBP3.24□□□□□ -1.89
AC055731.1-201ENST00000474387 PRR29P0C7W0 189 aa3.24□□□□□ -1.89
AC055731.1-201ENST00000474387 POTEJP0CG39 1038 aa3.24□□□□□ -1.89
AC055731.1-201ENST00000474387 TMCO4Q5TGY1 634 aa3.24□□□□□ -1.89
AC055731.1-201ENST00000474387 AEBP1Q8IUX7 1158 aa3.24□□□□□ -1.89
AC055731.1-201ENST00000474387 IL27Q8NEV9 243 aa3.24□□□□□ -1.89
AC055731.1-201ENST00000474387 TRIM41Q8WV44 630 aa3.24□□□□□ -1.89
AC055731.1-201ENST00000474387 MKRN4PQ13434 485 aaPredicted RBP3.23□□□□□ -1.89
AC055731.1-201ENST00000474387 NKX1-1Q15270 411 aaPredicted RBP3.23□□□□□ -1.89
AC055731.1-201ENST00000474387 MAMSTRQ6ZN01 415 aa3.23□□□□□ -1.89
AC055731.1-201ENST00000474387 KCNV2Q8TDN2 545 aa3.23□□□□□ -1.89
AC055731.1-201ENST00000474387 CHMP4AQ9BY43 222 aa3.23□□□□□ -1.89
AC055731.1-201ENST00000474387 MTMR7Q9Y216 660 aa3.23□□□□□ -1.89
AC055731.1-201ENST00000474387 MIER1Q8N108 512 aa3.22□□□□□ -1.89
AC055731.1-201ENST00000474387 CCDC82Q8N4S0 544 aa3.22□□□□□ -1.89
AC055731.1-201ENST00000474387 RYDENQ9NUL5 291 aaKnown RBP3.22□□□□□ -1.89
AC055731.1-201ENST00000474387 STAG3Q9UJ98 1225 aa3.22□□□□□ -1.89
AC055731.1-201ENST00000474387 E9PSI1 815 aa3.21□□□□□ -1.9
AC055731.1-201ENST00000474387 PLEKHG5O94827 1062 aa3.21□□□□□ -1.9
AC055731.1-201ENST00000474387 CDAN1Q8IWY9 1227 aa3.21□□□□□ -1.9
AC055731.1-201ENST00000474387 RGS22Q8NE09 1264 aa3.21□□□□□ -1.9
AC055731.1-201ENST00000474387 POLR3GLQ9BT43 218 aa3.21□□□□□ -1.9
AC055731.1-201ENST00000474387 USP35Q9P2H5 1018 aa3.21□□□□□ -1.9
AC055731.1-201ENST00000474387 STK25O00506 426 aa3.2□□□□□ -1.9
AC055731.1-201ENST00000474387 MFAP1P55081 439 aaKnown RBP3.2□□□□□ -1.9
AC055731.1-201ENST00000474387 FLIIQ13045 1269 aa3.2□□□□□ -1.9
AC055731.1-201ENST00000474387 FOXD4L5Q5VV16 416 aaPredicted RBP3.2□□□□□ -1.9
AC055731.1-201ENST00000474387 FOXD4L4Q8WXT5 416 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms