RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 ARHGAP35Q9NRY4 1499 aa6.71□□□□□ -1.34
U2SURP-208ENST00000473835 CCER2I3L3R5 266 aa6.7□□□□□ -1.34
U2SURP-208ENST00000473835 KDM5BQ9UGL1 1544 aa6.69□□□□□ -1.34
U2SURP-208ENST00000473835 APLP2Q06481 763 aa6.69□□□□□ -1.34
U2SURP-208ENST00000473835 DDX10Q13206 875 aaKnown RBP6.69□□□□□ -1.34
U2SURP-208ENST00000473835 MAP3K1Q13233 1512 aa6.68□□□□□ -1.34
U2SURP-208ENST00000473835 TIAM1Q13009 1591 aa6.68□□□□□ -1.34
U2SURP-208ENST00000473835 TRIM52Q96A61 297 aa6.67□□□□□ -1.34
U2SURP-208ENST00000473835 SETD5Q9C0A6 1442 aa6.67□□□□□ -1.34
U2SURP-208ENST00000473835 SIN3AQ96ST3 1273 aa6.66□□□□□ -1.34
U2SURP-208ENST00000473835 RANGAP1P46060 587 aaPredicted RBP6.65□□□□□ -1.34
U2SURP-208ENST00000473835 PHLDB1Q86UU1 1377 aa6.65□□□□□ -1.34
U2SURP-208ENST00000473835 CUX1P39880 1505 aa6.64□□□□□ -1.35
U2SURP-208ENST00000473835 CC2D2AQ9P2K1 1620 aa6.64□□□□□ -1.35
U2SURP-208ENST00000473835 CFAP43Q8NDM7 1665 aa6.64□□□□□ -1.35
U2SURP-208ENST00000473835 LRRC9Q6ZRR7 1453 aa6.63□□□□□ -1.35
U2SURP-208ENST00000473835 TIMELESSQ9UNS1 1208 aa6.63□□□□□ -1.35
U2SURP-208ENST00000473835 HIRIP3Q9BW71 556 aaPredicted RBP6.62□□□□□ -1.35
U2SURP-208ENST00000473835 LAMC3Q9Y6N6 1575 aa6.62□□□□□ -1.35
U2SURP-208ENST00000473835 NEFLP07196 543 aa6.62□□□□□ -1.35
U2SURP-208ENST00000473835 DEKP35659 375 aaKnown RBP6.62□□□□□ -1.35
U2SURP-208ENST00000473835 NCOA2Q15596 1464 aa6.6□□□□□ -1.35
U2SURP-208ENST00000473835 IRX6P78412 446 aaPredicted RBP6.59□□□□□ -1.35
U2SURP-208ENST00000473835 ABCA10Q8WWZ4 1543 aa6.59□□□□□ -1.35
U2SURP-208ENST00000473835 ANP32CO43423 234 aa6.59□□□□□ -1.35
U2SURP-208ENST00000473835 PCF11O94913 1555 aaKnown RBP6.58□□□□□ -1.36
U2SURP-208ENST00000473835 MYT1LQ9UL68 1186 aa6.58□□□□□ -1.36
U2SURP-208ENST00000473835 KIF27Q86VH2 1401 aa6.58□□□□□ -1.36
U2SURP-208ENST00000473835 PAK3O75914 559 aaPredicted RBP6.58□□□□□ -1.36
U2SURP-208ENST00000473835 ERICH6BQ5W0A0 696 aa6.58□□□□□ -1.36
U2SURP-208ENST00000473835 DENND4BO75064 1496 aaPredicted RBP6.58□□□□□ -1.36
U2SURP-208ENST00000473835 ANO8Q9HCE9 1232 aaPredicted RBP6.58□□□□□ -1.36
U2SURP-208ENST00000473835 DNMBPQ6XZF7 1577 aa6.58□□□□□ -1.36
U2SURP-208ENST00000473835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.58□□□□□ -1.36
U2SURP-208ENST00000473835 FHAD1B1AJZ9 1412 aa6.58□□□□□ -1.36
U2SURP-208ENST00000473835 CDK11AQ9UQ88 783 aaPredicted RBP6.57□□□□□ -1.36
U2SURP-208ENST00000473835 PRDM2Q13029 1718 aa6.57□□□□□ -1.36
U2SURP-208ENST00000473835 PTPRKQ15262 1439 aa6.57□□□□□ -1.36
U2SURP-208ENST00000473835 AQRO60306 1485 aaKnown RBP eCLIP6.57□□□□□ -1.365e-7■■■■□ 21.2
U2SURP-208ENST00000473835 CCDC184Q52MB2 194 aa6.57□□□□□ -1.36
U2SURP-208ENST00000473835 FANCD2Q9BXW9 1451 aa6.56□□□□□ -1.36
U2SURP-208ENST00000473835 PPP4R2Q9NY27 417 aa6.56□□□□□ -1.36
U2SURP-208ENST00000473835 PTPN23Q9H3S7 1636 aa6.55□□□□□ -1.36
U2SURP-208ENST00000473835 WASHC2AQ641Q2 1341 aa6.55□□□□□ -1.36
U2SURP-208ENST00000473835 PDS5BQ9NTI5 1447 aa6.55□□□□□ -1.36
U2SURP-208ENST00000473835 HNRNPUQ00839 825 aaKnown RBP eCLIP6.55□□□□□ -1.36
U2SURP-208ENST00000473835 IGF1RP08069 1367 aa6.54□□□□□ -1.36
U2SURP-208ENST00000473835 HFM1A2PYH4 1435 aa6.54□□□□□ -1.36
U2SURP-208ENST00000473835 NOP58Q9Y2X3 529 aaKnown RBP6.54□□□□□ -1.36
U2SURP-208ENST00000473835 TOPBP1Q92547 1522 aa6.54□□□□□ -1.36
U2SURP-208ENST00000473835 UACAQ9BZF9 1416 aa6.54□□□□□ -1.36
U2SURP-208ENST00000473835 CCDC18Q5T9S5 1454 aa6.53□□□□□ -1.36
U2SURP-208ENST00000473835 SALL2Q9Y467 1007 aaPredicted RBP6.53□□□□□ -1.36
U2SURP-208ENST00000473835 CNTLNQ9NXG0 1405 aa6.52□□□□□ -1.37
U2SURP-208ENST00000473835 FGD5Q6ZNL6 1462 aa6.52□□□□□ -1.37
U2SURP-208ENST00000473835 RNF123Q5XPI4 1314 aa6.52□□□□□ -1.37
U2SURP-208ENST00000473835 B4GALNT3Q6L9W6 998 aa6.52□□□□□ -1.37
U2SURP-208ENST00000473835 ABCA5Q8WWZ7 1642 aa6.52□□□□□ -1.37
U2SURP-208ENST00000473835 POLA1P09884 1462 aaPredicted RBP6.51□□□□□ -1.37
U2SURP-208ENST00000473835 LRRIQ1Q96JM4 1722 aa6.51□□□□□ -1.37
U2SURP-208ENST00000473835 FYCO1Q9BQS8 1478 aa6.51□□□□□ -1.37
U2SURP-208ENST00000473835 NAIPQ13075 1403 aa6.51□□□□□ -1.37
U2SURP-208ENST00000473835 ZBED9Q6R2W3 1325 aa6.51□□□□□ -1.37
U2SURP-208ENST00000473835 FGD6Q6ZV73 1430 aa6.51□□□□□ -1.37
U2SURP-208ENST00000473835 ERICH6Q7L0X2 663 aa6.51□□□□□ -1.37
U2SURP-208ENST00000473835 NCOA1Q15788 1441 aa6.5□□□□□ -1.37
U2SURP-208ENST00000473835 C11orf95C9JLR9 678 aaPredicted RBP6.5□□□□□ -1.37
U2SURP-208ENST00000473835 SNAPC4Q5SXM2 1469 aa6.5□□□□□ -1.37
U2SURP-208ENST00000473835 IL27Q8NEV9 243 aa6.5□□□□□ -1.37
U2SURP-208ENST00000473835 TONSLQ96HA7 1378 aa6.5□□□□□ -1.37
U2SURP-208ENST00000473835 URB2Q14146 1524 aaKnown RBP6.49□□□□□ -1.37
U2SURP-208ENST00000473835 CASKIN1Q8WXD9 1431 aa6.49□□□□□ -1.37
U2SURP-208ENST00000473835 NBR1Q14596 966 aa6.49□□□□□ -1.37
U2SURP-208ENST00000473835 HECW1Q76N89 1606 aa6.49□□□□□ -1.37
U2SURP-208ENST00000473835 AKNAQ7Z591 1439 aa6.49□□□□□ -1.37
U2SURP-208ENST00000473835 SMG6Q86US8 1419 aaKnown RBP6.49□□□□□ -1.37
U2SURP-208ENST00000473835 KDM6BO15054 1643 aa6.49□□□□□ -1.37
U2SURP-208ENST00000473835 POLR1AO95602 1720 aaPredicted RBP6.49□□□□□ -1.37
U2SURP-208ENST00000473835 HSPA5P11021 654 aaKnown RBP6.48□□□□□ -1.37
U2SURP-208ENST00000473835 FAM50AQ14320 339 aaKnown RBP6.48□□□□□ -1.37
U2SURP-208ENST00000473835 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
U2SURP-208ENST00000473835 PRKRIP1Q9H875 184 aaPredicted RBP6.48□□□□□ -1.37
U2SURP-208ENST00000473835 ARHGEF11O15085 1522 aa6.48□□□□□ -1.37
U2SURP-208ENST00000473835 SPATA31E1Q6ZUB1 1445 aa6.48□□□□□ -1.37
U2SURP-208ENST00000473835 GCC2Q8IWJ2 1684 aa6.47□□□□□ -1.37
U2SURP-208ENST00000473835 FHOD3Q2V2M9 1422 aa6.47□□□□□ -1.37
U2SURP-208ENST00000473835 EFCAB5A4FU69 1503 aa6.46□□□□□ -1.37
U2SURP-208ENST00000473835 CCDC7Q96M83 1385 aa6.46□□□□□ -1.37
U2SURP-208ENST00000473835 CARMIL1Q5VZK9 1371 aa6.46□□□□□ -1.38
U2SURP-208ENST00000473835 WASHC2CQ9Y4E1 1318 aa6.46□□□□□ -1.38
U2SURP-208ENST00000473835 DHX29Q7Z478 1369 aaKnown RBP6.45□□□□□ -1.38
U2SURP-208ENST00000473835 TEX14Q8IWB6 1497 aa6.45□□□□□ -1.38
U2SURP-208ENST00000473835 MRC2Q9UBG0 1479 aa6.45□□□□□ -1.38
U2SURP-208ENST00000473835 WDR62O43379 1518 aa6.45□□□□□ -1.38
U2SURP-208ENST00000473835 CUL7Q14999 1698 aa6.44□□□□□ -1.38
U2SURP-208ENST00000473835 MAGI3Q5TCQ9 1506 aa6.44□□□□□ -1.38
U2SURP-208ENST00000473835 NESP48681 1621 aa6.44□□□□□ -1.38
U2SURP-208ENST00000473835 CCDC136Q96JN2 1154 aa6.44□□□□□ -1.38
U2SURP-208ENST00000473835 TCOF1Q13428 1488 aaKnown RBP6.44□□□□□ -1.38
U2SURP-208ENST00000473835 TARBP1Q13395 1621 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms