RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
TRAF4-209ENST00000473421 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
TRAF4-209ENST00000473421 ADCY10Q96PN6 1610 aa22.57■■□□□ 1.2
TRAF4-209ENST00000473421 ABCC10Q5T3U5 1492 aa22.56■■□□□ 1.2
TRAF4-209ENST00000473421 IGF1RP08069 1367 aa22.52■■□□□ 1.2
TRAF4-209ENST00000473421 DIP2BQ9P265 1576 aa22.5■■□□□ 1.19
TRAF4-209ENST00000473421 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
TRAF4-209ENST00000473421 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
TRAF4-209ENST00000473421 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
TRAF4-209ENST00000473421 KDM4FA0A1W2PPD8 638 aa22.42■■□□□ 1.18
TRAF4-209ENST00000473421 TSPOAP1O95153 1857 aa22.41■■□□□ 1.18
TRAF4-209ENST00000473421 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
TRAF4-209ENST00000473421 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
TRAF4-209ENST00000473421 KDM6BO15054 1643 aa22.35■■□□□ 1.17
TRAF4-209ENST00000473421 CUL7Q14999 1698 aa22.35■■□□□ 1.17
TRAF4-209ENST00000473421 PTPRGP23470 1445 aa22.34■■□□□ 1.17
TRAF4-209ENST00000473421 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
TRAF4-209ENST00000473421 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
TRAF4-209ENST00000473421 ASXL2Q76L83 1435 aa22.24■■□□□ 1.15
TRAF4-209ENST00000473421 PPRC1Q5VV67 1664 aaKnown RBP22.24■■□□□ 1.15
TRAF4-209ENST00000473421 ABCC2Q92887 1545 aa22.24■■□□□ 1.15
TRAF4-209ENST00000473421 DISP1Q96F81 1524 aa22.21■■□□□ 1.15
TRAF4-209ENST00000473421 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
TRAF4-209ENST00000473421 CARMIL2Q6F5E8 1435 aa22.19■■□□□ 1.14
TRAF4-209ENST00000473421 COL17A1Q9UMD9 1497 aaPredicted RBP22.19■■□□□ 1.14
TRAF4-209ENST00000473421 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
TRAF4-209ENST00000473421 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
TRAF4-209ENST00000473421 GLI2P10070 1586 aa22.15■■□□□ 1.14
TRAF4-209ENST00000473421 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
TRAF4-209ENST00000473421 EPRSP07814 1512 aaKnown RBP22.1■■□□□ 1.13
TRAF4-209ENST00000473421 KDM5BQ9UGL1 1544 aa22.09■■□□□ 1.13
TRAF4-209ENST00000473421 ADGRL1O94910 1474 aa22.08■■□□□ 1.12
TRAF4-209ENST00000473421 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
TRAF4-209ENST00000473421 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
TRAF4-209ENST00000473421 MAP3K4Q9Y6R4 1608 aa22.06■■□□□ 1.12
TRAF4-209ENST00000473421 RAPGEF2Q9Y4G8 1499 aa22.04■■□□□ 1.12
TRAF4-209ENST00000473421 ILDR1Q86SU0 546 aaPredicted RBP22.04■■□□□ 1.12
TRAF4-209ENST00000473421 KIAA0556O60303 1618 aa22.02■■□□□ 1.12
TRAF4-209ENST00000473421 WDR7Q9Y4E6 1490 aa21.93■■□□□ 1.1
TRAF4-209ENST00000473421 TEX14Q8IWB6 1497 aa21.91■■□□□ 1.1
TRAF4-209ENST00000473421 KCNH8Q96L42 1107 aa21.9■■□□□ 1.1
TRAF4-209ENST00000473421 HECW2Q9P2P5 1572 aa21.87■■□□□ 1.09
TRAF4-209ENST00000473421 ABCA8O94911 1581 aa21.87■■□□□ 1.09
TRAF4-209ENST00000473421 CTTNBP2Q8WZ74 1663 aa21.85■■□□□ 1.09
TRAF4-209ENST00000473421 CD109Q6YHK3 1445 aa21.85■■□□□ 1.09
TRAF4-209ENST00000473421 ARID3CA6NKF2 412 aa21.83■■□□□ 1.09
TRAF4-209ENST00000473421 MAGI3Q5TCQ9 1506 aa21.81■■□□□ 1.08
TRAF4-209ENST00000473421 PRXQ9BXM0 1461 aa21.78■■□□□ 1.08
TRAF4-209ENST00000473421 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
TRAF4-209ENST00000473421 CFAP43Q8NDM7 1665 aa21.78■■□□□ 1.08
TRAF4-209ENST00000473421 GOLGA3Q08378 1498 aa21.77■■□□□ 1.07
TRAF4-209ENST00000473421 KIF21BO75037 1637 aa21.74■■□□□ 1.07
TRAF4-209ENST00000473421 ATP10BO94823 1461 aa21.72■■□□□ 1.07
TRAF4-209ENST00000473421 ARAP3Q8WWN8 1544 aa21.66■■□□□ 1.06
TRAF4-209ENST00000473421 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
TRAF4-209ENST00000473421 ABCA9Q8IUA7 1624 aa21.6■■□□□ 1.05
TRAF4-209ENST00000473421 SAMD9Q5K651 1589 aa21.57■■□□□ 1.04
TRAF4-209ENST00000473421 ADAMTSL3P82987 1691 aa21.56■■□□□ 1.04
TRAF4-209ENST00000473421 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
TRAF4-209ENST00000473421 PTPRMP28827 1452 aa21.55■■□□□ 1.04
TRAF4-209ENST00000473421 FRMPD1Q5SYB0 1578 aa21.55■■□□□ 1.04
TRAF4-209ENST00000473421 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
TRAF4-209ENST00000473421 RAPGEF6Q8TEU7 1601 aa21.53■■□□□ 1.04
TRAF4-209ENST00000473421 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.03
TRAF4-209ENST00000473421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
TRAF4-209ENST00000473421 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
TRAF4-209ENST00000473421 NEO1Q92859 1461 aa21.49■■□□□ 1.03
TRAF4-209ENST00000473421 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
TRAF4-209ENST00000473421 FHOD3Q2V2M9 1422 aa21.47■■□□□ 1.03
TRAF4-209ENST00000473421 BCORL1Q5H9F3 1711 aa21.46■■□□□ 1.03
TRAF4-209ENST00000473421 MADDQ8WXG6 1647 aa21.46■■□□□ 1.03
TRAF4-209ENST00000473421 ARID4BQ4LE39 1312 aaPredicted RBP21.44■■□□□ 1.02
TRAF4-209ENST00000473421 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
TRAF4-209ENST00000473421 FBXO41Q8TF61 875 aa21.43■■□□□ 1.02
TRAF4-209ENST00000473421 LMTK3Q96Q04 1460 aa21.4■■□□□ 1.02
TRAF4-209ENST00000473421 SIGLEC1Q9BZZ2 1709 aa21.4■■□□□ 1.02
TRAF4-209ENST00000473421 RICTORQ6R327 1708 aa21.38■■□□□ 1.01
TRAF4-209ENST00000473421 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
TRAF4-209ENST00000473421 PCF11O94913 1555 aaKnown RBP21.37■■□□□ 1.01
TRAF4-209ENST00000473421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.37■■□□□ 1.011e-10■□□□□ 8.2
TRAF4-209ENST00000473421 ARHGEF40Q8TER5 1519 aa21.36■■□□□ 1.01
TRAF4-209ENST00000473421 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
TRAF4-209ENST00000473421 HSPA2P54652 639 aa21.36■■□□□ 1.01
TRAF4-209ENST00000473421 DENND4BO75064 1496 aaPredicted RBP21.36■■□□□ 1.01
TRAF4-209ENST00000473421 RIMS1Q86UR5 1692 aaKnown RBP21.36■■□□□ 1.01
TRAF4-209ENST00000473421 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
TRAF4-209ENST00000473421 YEATS2Q9ULM3 1422 aa21.35■■□□□ 1.01
TRAF4-209ENST00000473421 TTC37Q6PGP7 1564 aa21.35■■□□□ 1.01
TRAF4-209ENST00000473421 FANCAO15360 1455 aa21.34■■□□□ 1.01
TRAF4-209ENST00000473421 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
TRAF4-209ENST00000473421 MLECQ14165 292 aa21.27■■□□□ 1
TRAF4-209ENST00000473421 EHMT2Q96KQ7 1210 aa21.27■■□□□ 1
TRAF4-209ENST00000473421 ZMYM4Q5VZL5 1548 aa21.26■□□□□ 0.99
TRAF4-209ENST00000473421 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
TRAF4-209ENST00000473421 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
TRAF4-209ENST00000473421 EEA1Q15075 1411 aa21.24■□□□□ 0.99
TRAF4-209ENST00000473421 SCAPERQ9BY12 1400 aa21.22■□□□□ 0.99
TRAF4-209ENST00000473421 CFAP74Q9C0B2 1584 aa21.21■□□□□ 0.99
TRAF4-209ENST00000473421 EFCAB5A4FU69 1503 aa21.2■□□□□ 0.98
TRAF4-209ENST00000473421 PLCH2O75038 1416 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms