RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 NEFMP07197 916 aa11□□□□□ -0.65
CDK5RAP2-209ENST00000473282 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
CDK5RAP2-209ENST00000473282 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP2-209ENST00000473282 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP2-209ENST00000473282 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
CDK5RAP2-209ENST00000473282 HSP90AA2PQ14568 343 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP2-209ENST00000473282 GOLGA6L22H0YM25 854 aa10.97□□□□□ -0.65
CDK5RAP2-209ENST00000473282 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP2-209ENST00000473282 USP35Q9P2H5 1018 aa10.96□□□□□ -0.66
CDK5RAP2-209ENST00000473282 TRIM52Q96A61 297 aa10.92□□□□□ -0.66
CDK5RAP2-209ENST00000473282 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
CDK5RAP2-209ENST00000473282 PNNQ9H307 717 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP2-209ENST00000473282 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
CDK5RAP2-209ENST00000473282 FBLN2P98095 1184 aa10.9□□□□□ -0.67
CDK5RAP2-209ENST00000473282 ANP32CO43423 234 aa10.86□□□□□ -0.67
CDK5RAP2-209ENST00000473282 PPM1GO15355 546 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP2-209ENST00000473282 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
CDK5RAP2-209ENST00000473282 SETQ01105 290 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-209ENST00000473282 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP2-209ENST00000473282 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
CDK5RAP2-209ENST00000473282 PSMD1Q99460 953 aa10.83□□□□□ -0.68
CDK5RAP2-209ENST00000473282 ZCCHC6Q5VYS8 1495 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 CHAF1AQ13111 956 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 GOLGA6L6A8MZA4 724 aa10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
CDK5RAP2-209ENST00000473282 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
CDK5RAP2-209ENST00000473282 TIMELESSQ9UNS1 1208 aa10.8□□□□□ -0.68
CDK5RAP2-209ENST00000473282 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP2-209ENST00000473282 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
CDK5RAP2-209ENST00000473282 UBE2Q2Q8WVN8 375 aa10.76□□□□□ -0.69
CDK5RAP2-209ENST00000473282 KLHL34Q8N239 644 aa10.76□□□□□ -0.69
CDK5RAP2-209ENST00000473282 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
CDK5RAP2-209ENST00000473282 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP2-209ENST00000473282 GOLGA6L1Q8N7Z2 621 aa10.74□□□□□ -0.69
CDK5RAP2-209ENST00000473282 CFAP44Q96MT7 982 aa10.71□□□□□ -0.7
CDK5RAP2-209ENST00000473282 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.7
CDK5RAP2-209ENST00000473282 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 PLCD4Q9BRC7 762 aa10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 UPF2Q9HAU5 1272 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP2-209ENST00000473282 ZNF777Q9ULD5 760 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP2-209ENST00000473282 PPP1R1BQ9UD71 204 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP2-209ENST00000473282 MSNP26038 577 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-209ENST00000473282 L1TD1Q5T7N2 865 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-209ENST00000473282 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
CDK5RAP2-209ENST00000473282 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
CDK5RAP2-209ENST00000473282 CC2D1BQ5T0F9 858 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP2-209ENST00000473282 TAF3Q5VWG9 929 aa10.66□□□□□ -0.7
CDK5RAP2-209ENST00000473282 FKBP8Q14318 412 aa10.65□□□□□ -0.7
CDK5RAP2-209ENST00000473282 HMGB1P1B2RPK0 211 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP2-209ENST00000473282 ZNF771Q7L3S4 317 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP2-209ENST00000473282 RB1CC1Q8TDY2 1594 aa10.63□□□□□ -0.71
CDK5RAP2-209ENST00000473282 SSR1P43307 286 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP2-209ENST00000473282 CLSTN1O94985 981 aa10.6□□□□□ -0.71
CDK5RAP2-209ENST00000473282 DHX37Q8IY37 1157 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP2-209ENST00000473282 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
CDK5RAP2-209ENST00000473282 NOP58Q9Y2X3 529 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP2-209ENST00000473282 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP2-209ENST00000473282 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP2-209ENST00000473282 CHMP4AQ9BY43 222 aa10.56□□□□□ -0.72
CDK5RAP2-209ENST00000473282 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
CDK5RAP2-209ENST00000473282 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDK5RAP2-209ENST00000473282 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP2-209ENST00000473282 PAIP2Q9BPZ3 127 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP2-209ENST00000473282 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP2-209ENST00000473282 BECN1Q14457 450 aa10.53□□□□□ -0.72
CDK5RAP2-209ENST00000473282 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP2-209ENST00000473282 CCDC66A2RUB6 948 aa10.51□□□□□ -0.73
CDK5RAP2-209ENST00000473282 TONSLQ96HA7 1378 aa10.51□□□□□ -0.73
CDK5RAP2-209ENST00000473282 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
CDK5RAP2-209ENST00000473282 RBM25P49756 843 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 GOLGA6L4A6NEF3 574 aa10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 FAM193AP78312 1265 aa10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 NACADO15069 1562 aa10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 CHIC2Q9UKJ5 165 aa10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 CLGNO14967 610 aa10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 NRDCO43847 1150 aa10.47□□□□□ -0.73
CDK5RAP2-209ENST00000473282 ESF1Q9H501 851 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP2-209ENST00000473282 DDX10Q13206 875 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP2-209ENST00000473282 PAF1Q8N7H5 531 aa10.46□□□□□ -0.73
CDK5RAP2-209ENST00000473282 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
CDK5RAP2-209ENST00000473282 AXDND1Q5T1B0 1012 aaPredicted RBP10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 DYDC1Q8WWB3 177 aa10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 SALL2Q9Y467 1007 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.744e-7■■■□□ 16.6
CDK5RAP2-209ENST00000473282 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 MYO15BQ96JP2 1530 aa10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 RDXP35241 583 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 KIAA2012Q0VF49 1180 aa10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 TMCO5BA8MYB1 307 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms