RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 WDR43Q15061 677 aaKnown RBP eCLIP23■■□□□ 1.27
LAMP1-203ENST00000472564 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
LAMP1-203ENST00000472564 ANP32BQ92688 251 aaKnown RBP22.92■■□□□ 1.26
LAMP1-203ENST00000472564 SUPT16HQ9Y5B9 1047 aaKnown RBP22.92■■□□□ 1.26
LAMP1-203ENST00000472564 SIN3AQ96ST3 1273 aa22.9■■□□□ 1.26
LAMP1-203ENST00000472564 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
LAMP1-203ENST00000472564 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
LAMP1-203ENST00000472564 STAG3Q9UJ98 1225 aa22.88■■□□□ 1.25
LAMP1-203ENST00000472564 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
LAMP1-203ENST00000472564 ANP32EQ9BTT0 268 aa22.84■■□□□ 1.25
LAMP1-203ENST00000472564 ESF1Q9H501 851 aaKnown RBP22.81■■□□□ 1.24
LAMP1-203ENST00000472564 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
LAMP1-203ENST00000472564 SENP3-EIF4A1A0A087X0R7 540 aa22.81■■□□□ 1.24
LAMP1-203ENST00000472564 NACADO15069 1562 aa22.8■■□□□ 1.24
LAMP1-203ENST00000472564 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
LAMP1-203ENST00000472564 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
LAMP1-203ENST00000472564 SOGA1O94964 1423 aa22.78■■□□□ 1.24
LAMP1-203ENST00000472564 CCNB3Q8WWL7 1395 aa22.77■■□□□ 1.23
LAMP1-203ENST00000472564 RGL3Q3MIN7 710 aa22.76■■□□□ 1.23
LAMP1-203ENST00000472564 ARXQ96QS3 562 aa22.75■■□□□ 1.23
LAMP1-203ENST00000472564 PLEKHD1A6NEE1 506 aa22.74■■□□□ 1.23
LAMP1-203ENST00000472564 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
LAMP1-203ENST00000472564 CFDP1Q9UEE9 299 aaPredicted RBP22.72■■□□□ 1.23
LAMP1-203ENST00000472564 PPP4R2Q9NY27 417 aa22.71■■□□□ 1.23
LAMP1-203ENST00000472564 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
LAMP1-203ENST00000472564 DDRGK1Q96HY6 314 aa22.69■■□□□ 1.22
LAMP1-203ENST00000472564 TIMELESSQ9UNS1 1208 aa22.67■■□□□ 1.22
LAMP1-203ENST00000472564 KCNH8Q96L42 1107 aa22.62■■□□□ 1.21
LAMP1-203ENST00000472564 VPS8Q8N3P4 1428 aa22.62■■□□□ 1.21
LAMP1-203ENST00000472564 KNSTRNQ9Y448 316 aa22.61■■□□□ 1.21
LAMP1-203ENST00000472564 BECN1Q14457 450 aa22.61■■□□□ 1.21
LAMP1-203ENST00000472564 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
LAMP1-203ENST00000472564 CDCA8Q53HL2 280 aa22.58■■□□□ 1.21
LAMP1-203ENST00000472564 CCER2I3L3R5 266 aa22.58■■□□□ 1.2
LAMP1-203ENST00000472564 B4GALNT3Q6L9W6 998 aa22.57■■□□□ 1.2
LAMP1-203ENST00000472564 MYH16Q9H6N6 1097 aa22.56■■□□□ 1.2
LAMP1-203ENST00000472564 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
LAMP1-203ENST00000472564 GLIPR1L2Q4G1C9 344 aa22.54■■□□□ 1.2
LAMP1-203ENST00000472564 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
LAMP1-203ENST00000472564 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
LAMP1-203ENST00000472564 PPM1GO15355 546 aaPredicted RBP22.51■■□□□ 1.19
LAMP1-203ENST00000472564 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
LAMP1-203ENST00000472564 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
LAMP1-203ENST00000472564 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
LAMP1-203ENST00000472564 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
LAMP1-203ENST00000472564 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
LAMP1-203ENST00000472564 NOP58Q9Y2X3 529 aaKnown RBP22.49■■□□□ 1.19
LAMP1-203ENST00000472564 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
LAMP1-203ENST00000472564 CUX2O14529 1486 aa22.46■■□□□ 1.19
LAMP1-203ENST00000472564 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
LAMP1-203ENST00000472564 RBM19Q9Y4C8 960 aaKnown RBP22.45■■□□□ 1.18
LAMP1-203ENST00000472564 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.18
LAMP1-203ENST00000472564 RGS3P49796 1198 aa22.44■■□□□ 1.18
LAMP1-203ENST00000472564 HSPA5P11021 654 aaKnown RBP22.43■■□□□ 1.18
LAMP1-203ENST00000472564 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
LAMP1-203ENST00000472564 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
LAMP1-203ENST00000472564 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.18
LAMP1-203ENST00000472564 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.17
LAMP1-203ENST00000472564 TRIM44Q96DX7 344 aaPredicted RBP22.37■■□□□ 1.17
LAMP1-203ENST00000472564 GOLGA6L22H0YM25 854 aa22.37■■□□□ 1.17
LAMP1-203ENST00000472564 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
LAMP1-203ENST00000472564 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
LAMP1-203ENST00000472564 ARHGAP35Q9NRY4 1499 aa22.33■■□□□ 1.17
LAMP1-203ENST00000472564 TMF1P82094 1093 aa22.31■■□□□ 1.16
LAMP1-203ENST00000472564 FOXD1Q16676 465 aa22.29■■□□□ 1.16
LAMP1-203ENST00000472564 TNNT2P45379 298 aaPredicted RBP22.29■■□□□ 1.16
LAMP1-203ENST00000472564 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
LAMP1-203ENST00000472564 NUDCQ9Y266 331 aa22.29■■□□□ 1.16
LAMP1-203ENST00000472564 MAPK8IP3Q9UPT6 1336 aa22.29■■□□□ 1.16
LAMP1-203ENST00000472564 NCLP19338 710 aaKnown RBP22.27■■□□□ 1.16
LAMP1-203ENST00000472564 TSHZ2Q9NRE2 1034 aa22.26■■□□□ 1.15
LAMP1-203ENST00000472564 PKD2Q13563 968 aa22.25■■□□□ 1.15
LAMP1-203ENST00000472564 RTN4Q9NQC3 1192 aaKnown RBP22.24■■□□□ 1.15
LAMP1-203ENST00000472564 MPHOSPH9Q99550 1183 aa22.23■■□□□ 1.15
LAMP1-203ENST00000472564 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
LAMP1-203ENST00000472564 C14orf37Q86TY3 774 aa22.19■■□□□ 1.14
LAMP1-203ENST00000472564 DEKP35659 375 aaKnown RBP22.19■■□□□ 1.14
LAMP1-203ENST00000472564 MS4A1P11836 297 aa22.18■■□□□ 1.14
LAMP1-203ENST00000472564 U2SURPO15042 1029 aaKnown RBP22.18■■□□□ 1.14
LAMP1-203ENST00000472564 CASC1Q6TDU7 716 aa22.17■■□□□ 1.14
LAMP1-203ENST00000472564 POGKQ9P215 609 aa22.17■■□□□ 1.14
LAMP1-203ENST00000472564 ZBTB7CA1YPR0 619 aa22.16■■□□□ 1.14
LAMP1-203ENST00000472564 PLEKHG5O94827 1062 aa22.15■■□□□ 1.14
LAMP1-203ENST00000472564 RCAN3Q9UKA8 241 aa22.14■■□□□ 1.13
LAMP1-203ENST00000472564 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
LAMP1-203ENST00000472564 KTN1Q86UP2 1357 aaKnown RBP22.14■■□□□ 1.13
LAMP1-203ENST00000472564 L3MBTL2Q969R5 705 aa22.13■■□□□ 1.13
LAMP1-203ENST00000472564 CHMP4BQ9H444 224 aaKnown RBP22.12■■□□□ 1.13
LAMP1-203ENST00000472564 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
LAMP1-203ENST00000472564 PTMAP06454 111 aaKnown RBP22.11■■□□□ 1.13
LAMP1-203ENST00000472564 WIZO95785 1651 aa22.11■■□□□ 1.13
LAMP1-203ENST00000472564 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
LAMP1-203ENST00000472564 RALBP1Q15311 655 aa22.1■■□□□ 1.13
LAMP1-203ENST00000472564 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
LAMP1-203ENST00000472564 HSP90AB1P08238 724 aaKnown RBP22.08■■□□□ 1.13
LAMP1-203ENST00000472564 MORC1Q86VD1 984 aa22.07■■□□□ 1.12
LAMP1-203ENST00000472564 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
LAMP1-203ENST00000472564 TDRD9Q8NDG6 1382 aaKnown RBP22.06■■□□□ 1.12
LAMP1-203ENST00000472564 NUP155O75694 1391 aa22.06■■□□□ 1.12
LAMP1-203ENST00000472564 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms