RNA–Protein interactions for RNA: ENST00000472462.1

USP33-207, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-207ENST00000472462 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
USP33-207ENST00000472462 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
USP33-207ENST00000472462 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
USP33-207ENST00000472462 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
USP33-207ENST00000472462 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
USP33-207ENST00000472462 MAP3K13O43283 966 aa13.06□□□□□ -0.32
USP33-207ENST00000472462 NUBP1P53384 320 aa13.05□□□□□ -0.32
USP33-207ENST00000472462 ATMINO43313 823 aaPredicted RBP13.04□□□□□ -0.32
USP33-207ENST00000472462 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
USP33-207ENST00000472462 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
USP33-207ENST00000472462 FAM212AQ96EL1 285 aa13□□□□□ -0.33
USP33-207ENST00000472462 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
USP33-207ENST00000472462 ATN1P54259 1190 aaPredicted RBP12.98□□□□□ -0.33
USP33-207ENST00000472462 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
USP33-207ENST00000472462 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
USP33-207ENST00000472462 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.33
USP33-207ENST00000472462 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
USP33-207ENST00000472462 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
USP33-207ENST00000472462 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
USP33-207ENST00000472462 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
USP33-207ENST00000472462 C7P10643 843 aa12.91□□□□□ -0.34
USP33-207ENST00000472462 TIE1P35590 1138 aa12.89□□□□□ -0.35
USP33-207ENST00000472462 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
USP33-207ENST00000472462 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
USP33-207ENST00000472462 PYGBP11216 843 aa12.87□□□□□ -0.35
USP33-207ENST00000472462 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
USP33-207ENST00000472462 PLSCR2Q9NRY7 297 aa12.86□□□□□ -0.35
USP33-207ENST00000472462 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
USP33-207ENST00000472462 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
USP33-207ENST00000472462 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
USP33-207ENST00000472462 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
USP33-207ENST00000472462 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
USP33-207ENST00000472462 SEC24BO95487 1268 aa12.77□□□□□ -0.37
USP33-207ENST00000472462 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
USP33-207ENST00000472462 GSE1Q14687 1217 aa12.74□□□□□ -0.37
USP33-207ENST00000472462 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
USP33-207ENST00000472462 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.37
USP33-207ENST00000472462 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
USP33-207ENST00000472462 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
USP33-207ENST00000472462 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
USP33-207ENST00000472462 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
USP33-207ENST00000472462 IER5LQ5T953 404 aa12.67□□□□□ -0.38
USP33-207ENST00000472462 PLCG2P16885 1265 aa12.63□□□□□ -0.39
USP33-207ENST00000472462 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
USP33-207ENST00000472462 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
USP33-207ENST00000472462 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
USP33-207ENST00000472462 POTEMA6NI47 508 aa12.54□□□□□ -0.4
USP33-207ENST00000472462 PSEN1P49768 467 aa12.54□□□□□ -0.4
USP33-207ENST00000472462 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
USP33-207ENST00000472462 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
USP33-207ENST00000472462 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
USP33-207ENST00000472462 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
USP33-207ENST00000472462 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
USP33-207ENST00000472462 SLAIN1Q8ND83 568 aa12.49□□□□□ -0.41
USP33-207ENST00000472462 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
USP33-207ENST00000472462 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
USP33-207ENST00000472462 CABP2Q9NPB3 220 aa12.42□□□□□ -0.42
USP33-207ENST00000472462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.422e-6■■■□□ 15.6
USP33-207ENST00000472462 PDCD7Q8N8D1 485 aaKnown RBP12.4□□□□□ -0.42
USP33-207ENST00000472462 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
USP33-207ENST00000472462 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
USP33-207ENST00000472462 C3orf67Q6ZVT6 689 aa12.34□□□□□ -0.43
USP33-207ENST00000472462 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
USP33-207ENST00000472462 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
USP33-207ENST00000472462 ST18O60284 1047 aa12.27□□□□□ -0.45
USP33-207ENST00000472462 G3V3G9 751 aa12.26□□□□□ -0.45
USP33-207ENST00000472462 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
USP33-207ENST00000472462 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
USP33-207ENST00000472462 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
USP33-207ENST00000472462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.22□□□□□ -0.45
USP33-207ENST00000472462 ZFP91Q96JP5 570 aaPredicted RBP12.22□□□□□ -0.45
USP33-207ENST00000472462 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
USP33-207ENST00000472462 SNPHO15079 494 aa12.21□□□□□ -0.45
USP33-207ENST00000472462 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
USP33-207ENST00000472462 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
USP33-207ENST00000472462 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
USP33-207ENST00000472462 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
USP33-207ENST00000472462 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
USP33-207ENST00000472462 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
USP33-207ENST00000472462 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
USP33-207ENST00000472462 TMEM121BQ9BXQ6 578 aaPredicted RBP12.1□□□□□ -0.47
USP33-207ENST00000472462 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
USP33-207ENST00000472462 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
USP33-207ENST00000472462 SOX12O15370 315 aa12.08□□□□□ -0.48
USP33-207ENST00000472462 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
USP33-207ENST00000472462 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
USP33-207ENST00000472462 EMP3P54852 163 aa12.05□□□□□ -0.48
USP33-207ENST00000472462 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
USP33-207ENST00000472462 STK25O00506 426 aa12.04□□□□□ -0.48
USP33-207ENST00000472462 RGL2O15211 777 aa12.02□□□□□ -0.49
USP33-207ENST00000472462 PKD2Q13563 968 aa12.02□□□□□ -0.49
USP33-207ENST00000472462 NLRP6P59044 892 aa11.99□□□□□ -0.49
USP33-207ENST00000472462 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
USP33-207ENST00000472462 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
USP33-207ENST00000472462 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
USP33-207ENST00000472462 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
USP33-207ENST00000472462 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
USP33-207ENST00000472462 FBXO22Q8NEZ5 403 aa11.94□□□□□ -0.5
USP33-207ENST00000472462 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
USP33-207ENST00000472462 MFRPQ9BY79 579 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms