RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ABCC10Q5T3U5 1492 aa34.4■■■■□ 3.1
SORT1-203ENST00000471996 NPM1P06748 294 aaKnown RBP eCLIP34.36■■■■□ 3.09
SORT1-203ENST00000471996 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
SORT1-203ENST00000471996 MAPKBP1O60336 1514 aa34.3■■■■□ 3.08
SORT1-203ENST00000471996 RUSC2Q8N2Y8 1516 aa34.25■■■■□ 3.07
SORT1-203ENST00000471996 DIP2BQ9P265 1576 aa34.23■■■■□ 3.07
SORT1-203ENST00000471996 KDM4FA0A1W2PPD8 638 aa34.21■■■■□ 3.07
SORT1-203ENST00000471996 ADCY10Q96PN6 1610 aa34.18■■■■□ 3.06
SORT1-203ENST00000471996 KDM6BO15054 1643 aa34.13■■■■□ 3.05
SORT1-203ENST00000471996 KIAA0586Q9BVV6 1533 aa34.06■■■■□ 3.04
SORT1-203ENST00000471996 IGF1RP08069 1367 aa33.96■■■■□ 3.03
SORT1-203ENST00000471996 TSPOAP1O95153 1857 aa33.94■■■■□ 3.02
SORT1-203ENST00000471996 ILDR1Q86SU0 546 aaPredicted RBP33.92■■■■□ 3.02
SORT1-203ENST00000471996 PTPRGP23470 1445 aa33.9■■■■□ 3.02
SORT1-203ENST00000471996 KIF27Q86VH2 1401 aa33.83■■■■□ 3.01
SORT1-203ENST00000471996 CUL7Q14999 1698 aa33.81■■■■□ 3
SORT1-203ENST00000471996 ABCC2Q92887 1545 aa33.8■■■■□ 3
SORT1-203ENST00000471996 TTBK1Q5TCY1 1321 aaPredicted RBP33.79■■■■□ 3
SORT1-203ENST00000471996 TNIKQ9UKE5 1360 aa33.78■■■■□ 3
SORT1-203ENST00000471996 ASXL2Q76L83 1435 aa33.77■■■■□ 3
SORT1-203ENST00000471996 PLB1Q6P1J6 1458 aa33.76■■■□□ 2.99
SORT1-203ENST00000471996 CARMIL2Q6F5E8 1435 aa33.75■■■□□ 2.99
SORT1-203ENST00000471996 GLI2P10070 1586 aa33.74■■■□□ 2.99
SORT1-203ENST00000471996 ADGRL1O94910 1474 aa33.7■■■□□ 2.99
SORT1-203ENST00000471996 CARMIL1Q5VZK9 1371 aa33.7■■■□□ 2.98
SORT1-203ENST00000471996 PPRC1Q5VV67 1664 aaKnown RBP33.68■■■□□ 2.98
SORT1-203ENST00000471996 UHRF1BP1LA0JNW5 1464 aa33.66■■■□□ 2.98
SORT1-203ENST00000471996 COL17A1Q9UMD9 1497 aaPredicted RBP33.62■■■□□ 2.97
SORT1-203ENST00000471996 UACAQ9BZF9 1416 aa33.62■■■□□ 2.97
SORT1-203ENST00000471996 IQGAP2Q13576 1575 aa33.56■■■□□ 2.96
SORT1-203ENST00000471996 EPRSP07814 1512 aaKnown RBP33.55■■■□□ 2.96
SORT1-203ENST00000471996 DISP1Q96F81 1524 aa33.51■■■□□ 2.95
SORT1-203ENST00000471996 KDM5BQ9UGL1 1544 aa33.51■■■□□ 2.95
SORT1-203ENST00000471996 TEX14Q8IWB6 1497 aa33.5■■■□□ 2.95
SORT1-203ENST00000471996 MAP3K4Q9Y6R4 1608 aa33.49■■■□□ 2.95
SORT1-203ENST00000471996 HECW2Q9P2P5 1572 aa33.46■■■□□ 2.95
SORT1-203ENST00000471996 ZCCHC11Q5TAX3 1644 aaKnown RBP33.37■■■□□ 2.93
SORT1-203ENST00000471996 UGGT2Q9NYU1 1516 aa33.37■■■□□ 2.93
SORT1-203ENST00000471996 WDR7Q9Y4E6 1490 aa33.31■■■□□ 2.92
SORT1-203ENST00000471996 KIAA0556O60303 1618 aa33.28■■■□□ 2.92
SORT1-203ENST00000471996 RAPGEF2Q9Y4G8 1499 aa33.27■■■□□ 2.92
SORT1-203ENST00000471996 MAGI3Q5TCQ9 1506 aa33.21■■■□□ 2.91
SORT1-203ENST00000471996 CD109Q6YHK3 1445 aa33.2■■■□□ 2.91
SORT1-203ENST00000471996 KCNH8Q96L42 1107 aa33.14■■■□□ 2.9
SORT1-203ENST00000471996 CFAP43Q8NDM7 1665 aa33.1■■■□□ 2.89
SORT1-203ENST00000471996 ABCA8O94911 1581 aa33.04■■■□□ 2.88
SORT1-203ENST00000471996 FBXO41Q8TF61 875 aa33.04■■■□□ 2.88
SORT1-203ENST00000471996 GOLGA3Q08378 1498 aa33.04■■■□□ 2.88
SORT1-203ENST00000471996 KIF21BO75037 1637 aa32.99■■■□□ 2.87
SORT1-203ENST00000471996 ARAP3Q8WWN8 1544 aa32.97■■■□□ 2.87
SORT1-203ENST00000471996 CTTNBP2Q8WZ74 1663 aa32.91■■■□□ 2.86
SORT1-203ENST00000471996 PTPRMP28827 1452 aa32.86■■■□□ 2.85
SORT1-203ENST00000471996 PHLDB1Q86UU1 1377 aa32.85■■■□□ 2.85
SORT1-203ENST00000471996 ARID3CA6NKF2 412 aa32.81■■■□□ 2.84
SORT1-203ENST00000471996 ATP10BO94823 1461 aa32.8■■■□□ 2.84
SORT1-203ENST00000471996 ADAMTSL3P82987 1691 aa32.8■■■□□ 2.84
SORT1-203ENST00000471996 FAM9AQ8IZU1 332 aaPredicted RBP32.79■■■□□ 2.84
SORT1-203ENST00000471996 RAPGEF3O95398 923 aa32.78■■■□□ 2.84
SORT1-203ENST00000471996 PRXQ9BXM0 1461 aa32.76■■■□□ 2.84
SORT1-203ENST00000471996 ABCA9Q8IUA7 1624 aa32.73■■■□□ 2.83
SORT1-203ENST00000471996 NEO1Q92859 1461 aa32.7■■■□□ 2.83
SORT1-203ENST00000471996 P3H3Q8IVL6 736 aa32.7■■■□□ 2.83
SORT1-203ENST00000471996 ARID4BQ4LE39 1312 aaPredicted RBP32.66■■■□□ 2.82
SORT1-203ENST00000471996 PCF11O94913 1555 aaKnown RBP32.66■■■□□ 2.82
SORT1-203ENST00000471996 BCORL1Q5H9F3 1711 aa32.64■■■□□ 2.82
SORT1-203ENST00000471996 LMTK3Q96Q04 1460 aa32.63■■■□□ 2.81
SORT1-203ENST00000471996 MADDQ8WXG6 1647 aa32.6■■■□□ 2.81
SORT1-203ENST00000471996 FRMPD1Q5SYB0 1578 aa32.59■■■□□ 2.81
SORT1-203ENST00000471996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.56■■■□□ 2.8
SORT1-203ENST00000471996 HNRNPUL2Q1KMD3 747 aaKnown RBP32.56■■■□□ 2.8
SORT1-203ENST00000471996 RAPGEF6Q8TEU7 1601 aa32.51■■■□□ 2.79
SORT1-203ENST00000471996 SAMD9Q5K651 1589 aa32.49■■■□□ 2.79
SORT1-203ENST00000471996 ARHGEF40Q8TER5 1519 aa32.47■■■□□ 2.79
SORT1-203ENST00000471996 DENND4BO75064 1496 aaPredicted RBP32.47■■■□□ 2.79
SORT1-203ENST00000471996 HSPA2P54652 639 aa32.46■■■□□ 2.79
SORT1-203ENST00000471996 RIMS1Q86UR5 1692 aaKnown RBP32.44■■■□□ 2.78
SORT1-203ENST00000471996 NUP153P49790 1475 aaKnown RBP32.44■■■□□ 2.78
SORT1-203ENST00000471996 FHOD3Q2V2M9 1422 aa32.42■■■□□ 2.78
SORT1-203ENST00000471996 AKNAQ7Z591 1439 aa32.41■■■□□ 2.78
SORT1-203ENST00000471996 POGZQ7Z3K3 1410 aa32.38■■■□□ 2.77
SORT1-203ENST00000471996 PLEKHD1A6NEE1 506 aa32.38■■■□□ 2.77
SORT1-203ENST00000471996 PLPPR3Q6T4P5 718 aa32.37■■■□□ 2.77
SORT1-203ENST00000471996 RICTORQ6R327 1708 aa32.37■■■□□ 2.77
SORT1-203ENST00000471996 FANCAO15360 1455 aa32.35■■■□□ 2.77
SORT1-203ENST00000471996 CERKQ8TCT0 537 aa32.35■■■□□ 2.77
SORT1-203ENST00000471996 CSRNP3Q8WYN3 585 aa32.34■■■□□ 2.77
SORT1-203ENST00000471996 ZMYM4Q5VZL5 1548 aa32.3■■■□□ 2.76
SORT1-203ENST00000471996 CFAP74Q9C0B2 1584 aa32.28■■■□□ 2.76
SORT1-203ENST00000471996 YEATS2Q9ULM3 1422 aa32.28■■■□□ 2.76
SORT1-203ENST00000471996 ZFYVE16Q7Z3T8 1539 aa32.27■■■□□ 2.76
SORT1-203ENST00000471996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.27■■■□□ 2.762e-7■□□□□ 10.2
SORT1-203ENST00000471996 MAGI2Q86UL8 1455 aa32.26■■■□□ 2.75
SORT1-203ENST00000471996 EFCAB5A4FU69 1503 aa32.26■■■□□ 2.75
SORT1-203ENST00000471996 RANGAP1P46060 587 aaPredicted RBP32.25■■■□□ 2.75
SORT1-203ENST00000471996 MLECQ14165 292 aa32.24■■■□□ 2.75
SORT1-203ENST00000471996 SIGLEC1Q9BZZ2 1709 aa32.23■■■□□ 2.75
SORT1-203ENST00000471996 TTC37Q6PGP7 1564 aa32.19■■■□□ 2.74
SORT1-203ENST00000471996 HECW1Q76N89 1606 aa32.16■■■□□ 2.74
SORT1-203ENST00000471996 SCAPERQ9BY12 1400 aa32.14■■■□□ 2.74
SORT1-203ENST00000471996 FER1L4A9Z1Z3 1794 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms