RNA–Protein interactions for RNA: ENST00000471960.5

ARPC1A-204, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-204ENST00000471960 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
ARPC1A-204ENST00000471960 PRG4Q92954 1404 aaPredicted RBP23.88■■□□□ 1.41
ARPC1A-204ENST00000471960 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
ARPC1A-204ENST00000471960 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
ARPC1A-204ENST00000471960 KIAA0586Q9BVV6 1533 aa23.81■■□□□ 1.4
ARPC1A-204ENST00000471960 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
ARPC1A-204ENST00000471960 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
ARPC1A-204ENST00000471960 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
ARPC1A-204ENST00000471960 ADCY10Q96PN6 1610 aa23.59■■□□□ 1.37
ARPC1A-204ENST00000471960 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.36
ARPC1A-204ENST00000471960 PRXQ9BXM0 1461 aa23.57■■□□□ 1.36
ARPC1A-204ENST00000471960 DISP1Q96F81 1524 aa23.55■■□□□ 1.36
ARPC1A-204ENST00000471960 PTPRGP23470 1445 aa23.52■■□□□ 1.36
ARPC1A-204ENST00000471960 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
ARPC1A-204ENST00000471960 UGGT2Q9NYU1 1516 aa23.51■■□□□ 1.35
ARPC1A-204ENST00000471960 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
ARPC1A-204ENST00000471960 CARMIL2Q6F5E8 1435 aa23.5■■□□□ 1.35
ARPC1A-204ENST00000471960 KIF13AQ9H1H9 1805 aa23.48■■□□□ 1.35
ARPC1A-204ENST00000471960 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
ARPC1A-204ENST00000471960 KIAA0556O60303 1618 aa23.45■■□□□ 1.34
ARPC1A-204ENST00000471960 FAM9AQ8IZU1 332 aaPredicted RBP23.42■■□□□ 1.34
ARPC1A-204ENST00000471960 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
ARPC1A-204ENST00000471960 MAPKBP1O60336 1514 aa23.41■■□□□ 1.34
ARPC1A-204ENST00000471960 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
ARPC1A-204ENST00000471960 ABCC2Q92887 1545 aa23.36■■□□□ 1.33
ARPC1A-204ENST00000471960 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
ARPC1A-204ENST00000471960 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
ARPC1A-204ENST00000471960 EEA1Q15075 1411 aa23.34■■□□□ 1.33
ARPC1A-204ENST00000471960 FAM69CQ0P6D2 419 aa23.34■■□□□ 1.33
ARPC1A-204ENST00000471960 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
ARPC1A-204ENST00000471960 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
ARPC1A-204ENST00000471960 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
ARPC1A-204ENST00000471960 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
ARPC1A-204ENST00000471960 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
ARPC1A-204ENST00000471960 KDM5BQ9UGL1 1544 aa23.25■■□□□ 1.31
ARPC1A-204ENST00000471960 ZCCHC11Q5TAX3 1644 aaKnown RBP23.24■■□□□ 1.31
ARPC1A-204ENST00000471960 ABCA8O94911 1581 aa23.23■■□□□ 1.31
ARPC1A-204ENST00000471960 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
ARPC1A-204ENST00000471960 KIF21BO75037 1637 aa23.22■■□□□ 1.31
ARPC1A-204ENST00000471960 EHMT2Q96KQ7 1210 aa23.21■■□□□ 1.31
ARPC1A-204ENST00000471960 SAMD9Q5K651 1589 aa23.21■■□□□ 1.31
ARPC1A-204ENST00000471960 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
ARPC1A-204ENST00000471960 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
ARPC1A-204ENST00000471960 PPRC1Q5VV67 1664 aaKnown RBP23.13■■□□□ 1.29
ARPC1A-204ENST00000471960 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
ARPC1A-204ENST00000471960 GLI2P10070 1586 aa23.12■■□□□ 1.29
ARPC1A-204ENST00000471960 FHOD3Q2V2M9 1422 aa23.09■■□□□ 1.29
ARPC1A-204ENST00000471960 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
ARPC1A-204ENST00000471960 MAP3K4Q9Y6R4 1608 aa23.04■■□□□ 1.28
ARPC1A-204ENST00000471960 ATP10BO94823 1461 aa23.04■■□□□ 1.28
ARPC1A-204ENST00000471960 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
ARPC1A-204ENST00000471960 KDM6BO15054 1643 aa23.02■■□□□ 1.28
ARPC1A-204ENST00000471960 UBTFP17480 764 aaKnown RBP23.02■■□□□ 1.28
ARPC1A-204ENST00000471960 KCNH8Q96L42 1107 aa23■■□□□ 1.27
ARPC1A-204ENST00000471960 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
ARPC1A-204ENST00000471960 EFCAB5A4FU69 1503 aa22.97■■□□□ 1.27
ARPC1A-204ENST00000471960 COL17A1Q9UMD9 1497 aaPredicted RBP22.94■■□□□ 1.26
ARPC1A-204ENST00000471960 ARHGAP35Q9NRY4 1499 aa22.92■■□□□ 1.26
ARPC1A-204ENST00000471960 CFAP43Q8NDM7 1665 aa22.9■■□□□ 1.26
ARPC1A-204ENST00000471960 CD109Q6YHK3 1445 aa22.89■■□□□ 1.25
ARPC1A-204ENST00000471960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.87■■□□□ 1.25
ARPC1A-204ENST00000471960 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
ARPC1A-204ENST00000471960 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
ARPC1A-204ENST00000471960 MAGI3Q5TCQ9 1506 aa22.84■■□□□ 1.25
ARPC1A-204ENST00000471960 CDK13Q14004 1512 aaKnown RBP22.82■■□□□ 1.24
ARPC1A-204ENST00000471960 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
ARPC1A-204ENST00000471960 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
ARPC1A-204ENST00000471960 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
ARPC1A-204ENST00000471960 LRRIQ1Q96JM4 1722 aa22.74■■□□□ 1.23
ARPC1A-204ENST00000471960 PLEKHD1A6NEE1 506 aa22.72■■□□□ 1.23
ARPC1A-204ENST00000471960 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
ARPC1A-204ENST00000471960 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
ARPC1A-204ENST00000471960 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
ARPC1A-204ENST00000471960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.69■■□□□ 1.22
ARPC1A-204ENST00000471960 PCF11O94913 1555 aaKnown RBP22.66■■□□□ 1.22
ARPC1A-204ENST00000471960 ARAP3Q8WWN8 1544 aa22.66■■□□□ 1.22
ARPC1A-204ENST00000471960 CLIP1P30622 1438 aa22.65■■□□□ 1.22
ARPC1A-204ENST00000471960 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
ARPC1A-204ENST00000471960 NEO1Q92859 1461 aa22.61■■□□□ 1.21
ARPC1A-204ENST00000471960 CASKIN1Q8WXD9 1431 aa22.6■■□□□ 1.21
ARPC1A-204ENST00000471960 RAPGEF3O95398 923 aa22.6■■□□□ 1.21
ARPC1A-204ENST00000471960 KIF14Q15058 1648 aa22.6■■□□□ 1.21
ARPC1A-204ENST00000471960 FRMPD1Q5SYB0 1578 aa22.59■■□□□ 1.21
ARPC1A-204ENST00000471960 ADGRL1O94910 1474 aa22.58■■□□□ 1.2
ARPC1A-204ENST00000471960 FANCAO15360 1455 aa22.55■■□□□ 1.2
ARPC1A-204ENST00000471960 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
ARPC1A-204ENST00000471960 TROQ12816 1431 aaPredicted RBP22.54■■□□□ 1.2
ARPC1A-204ENST00000471960 AKNAQ7Z591 1439 aa22.54■■□□□ 1.2
ARPC1A-204ENST00000471960 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
ARPC1A-204ENST00000471960 FYCO1Q9BQS8 1478 aa22.51■■□□□ 1.19
ARPC1A-204ENST00000471960 PLCH2O75038 1416 aa22.5■■□□□ 1.19
ARPC1A-204ENST00000471960 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
ARPC1A-204ENST00000471960 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
ARPC1A-204ENST00000471960 RICTORQ6R327 1708 aa22.49■■□□□ 1.19
ARPC1A-204ENST00000471960 MYO5CQ9NQX4 1742 aa22.49■■□□□ 1.19
ARPC1A-204ENST00000471960 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
ARPC1A-204ENST00000471960 CFAP74Q9C0B2 1584 aa22.48■■□□□ 1.19
ARPC1A-204ENST00000471960 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
ARPC1A-204ENST00000471960 SCAPERQ9BY12 1400 aa22.41■■□□□ 1.18
ARPC1A-204ENST00000471960 CDC42BPBQ9Y5S2 1711 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms