RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
MDM2-216ENST00000471946 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
MDM2-216ENST00000471946 FAM212AQ96EL1 285 aa10.62□□□□□ -0.71
MDM2-216ENST00000471946 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
MDM2-216ENST00000471946 GABBR2O75899 941 aa10.57□□□□□ -0.72
MDM2-216ENST00000471946 RGL2O15211 777 aa10.53□□□□□ -0.72
MDM2-216ENST00000471946 PYGBP11216 843 aa10.53□□□□□ -0.72
MDM2-216ENST00000471946 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
MDM2-216ENST00000471946 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
MDM2-216ENST00000471946 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
MDM2-216ENST00000471946 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
MDM2-216ENST00000471946 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
MDM2-216ENST00000471946 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
MDM2-216ENST00000471946 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
MDM2-216ENST00000471946 KIF12Q96FN5 646 aa10.41□□□□□ -0.74
MDM2-216ENST00000471946 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
MDM2-216ENST00000471946 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
MDM2-216ENST00000471946 MAP3K13O43283 966 aa10.39□□□□□ -0.75
MDM2-216ENST00000471946 POTEIP0CG38 1075 aa10.38□□□□□ -0.75
MDM2-216ENST00000471946 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
MDM2-216ENST00000471946 PCDHB13Q9Y5F0 798 aa10.38□□□□□ -0.75
MDM2-216ENST00000471946 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
MDM2-216ENST00000471946 GALR2O43603 387 aaPredicted RBP10.34□□□□□ -0.75
MDM2-216ENST00000471946 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
MDM2-216ENST00000471946 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
MDM2-216ENST00000471946 ZNF467Q7Z7K2 595 aaPredicted RBP10.33□□□□□ -0.76
MDM2-216ENST00000471946 SGIP1Q9BQI5 828 aa10.33□□□□□ -0.76
MDM2-216ENST00000471946 VGFO15240 615 aaPredicted RBP10.32□□□□□ -0.76
MDM2-216ENST00000471946 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
MDM2-216ENST00000471946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
MDM2-216ENST00000471946 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
MDM2-216ENST00000471946 MS4A3Q96HJ5 214 aa10.27□□□□□ -0.77
MDM2-216ENST00000471946 DCBLD2Q96PD2 775 aa10.27□□□□□ -0.77
MDM2-216ENST00000471946 STK25O00506 426 aa10.26□□□□□ -0.77
MDM2-216ENST00000471946 PSEN1P49768 467 aa10.26□□□□□ -0.77
MDM2-216ENST00000471946 PDAP1Q13442 181 aaKnown RBP10.26□□□□□ -0.77
MDM2-216ENST00000471946 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
MDM2-216ENST00000471946 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
MDM2-216ENST00000471946 BCL11BQ9C0K0 894 aaPredicted RBP10.24□□□□□ -0.77
MDM2-216ENST00000471946 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
MDM2-216ENST00000471946 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
MDM2-216ENST00000471946 CLCN6P51797 869 aa10.21□□□□□ -0.77
MDM2-216ENST00000471946 LHX8Q68G74 356 aa10.21□□□□□ -0.77
MDM2-216ENST00000471946 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
MDM2-216ENST00000471946 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
MDM2-216ENST00000471946 NKX1-1Q15270 411 aaPredicted RBP10.16□□□□□ -0.78
MDM2-216ENST00000471946 PELP1Q8IZL8 1130 aaKnown RBP10.16□□□□□ -0.78
MDM2-216ENST00000471946 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
MDM2-216ENST00000471946 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
MDM2-216ENST00000471946 CFAP44Q96MT7 982 aa10.14□□□□□ -0.79
MDM2-216ENST00000471946 TIE1P35590 1138 aa10.13□□□□□ -0.79
MDM2-216ENST00000471946 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
MDM2-216ENST00000471946 CABP2Q9NPB3 220 aa10.13□□□□□ -0.79
MDM2-216ENST00000471946 TTLL13PA6NNM8 815 aa10.12□□□□□ -0.79
MDM2-216ENST00000471946 SPRYD3Q8NCJ5 442 aa10.12□□□□□ -0.79
MDM2-216ENST00000471946 BMP2KQ9NSY1 1161 aaPredicted RBP10.12□□□□□ -0.79
MDM2-216ENST00000471946 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
MDM2-216ENST00000471946 GTPBP6O43824 516 aaPredicted RBP10.08□□□□□ -0.8
MDM2-216ENST00000471946 POTEB2H3BUK9 544 aa10.07□□□□□ -0.8
MDM2-216ENST00000471946 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
MDM2-216ENST00000471946 ATN1P54259 1190 aaPredicted RBP10.07□□□□□ -0.8
MDM2-216ENST00000471946 GOLGA2Q08379 1002 aa10.06□□□□□ -0.8
MDM2-216ENST00000471946 TRIM35Q9UPQ4 493 aa10.05□□□□□ -0.8
MDM2-216ENST00000471946 SOX12O15370 315 aa10.04□□□□□ -0.8
MDM2-216ENST00000471946 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
MDM2-216ENST00000471946 MFRPQ9BY79 579 aa10.04□□□□□ -0.8
MDM2-216ENST00000471946 MKRN3Q13064 507 aaKnown RBP10.03□□□□□ -0.8
MDM2-216ENST00000471946 SLC24A1O60721 1099 aa10.02□□□□□ -0.81
MDM2-216ENST00000471946 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
MDM2-216ENST00000471946 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
MDM2-216ENST00000471946 NLRP6P59044 892 aa9.99□□□□□ -0.81
MDM2-216ENST00000471946 FBXO22Q8NEZ5 403 aa9.99□□□□□ -0.81
MDM2-216ENST00000471946 METRNQ9UJH8 293 aa9.99□□□□□ -0.81
MDM2-216ENST00000471946 TSHZ2Q9NRE2 1034 aa9.97□□□□□ -0.81
MDM2-216ENST00000471946 RYDENQ9NUL5 291 aaKnown RBP9.97□□□□□ -0.81
MDM2-216ENST00000471946 PPP1R37O75864 691 aa9.96□□□□□ -0.82
MDM2-216ENST00000471946 OTUD5Q96G74 571 aa9.96□□□□□ -0.82
MDM2-216ENST00000471946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.821e-16■■□□□ 11.4
MDM2-216ENST00000471946 SLC39A7Q92504 469 aa9.95□□□□□ -0.82
MDM2-216ENST00000471946 MS4A4AQ96JQ5 239 aa9.95□□□□□ -0.82
MDM2-216ENST00000471946 POTEJP0CG39 1038 aa9.94□□□□□ -0.82
MDM2-216ENST00000471946 C7P10643 843 aa9.93□□□□□ -0.82
MDM2-216ENST00000471946 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
MDM2-216ENST00000471946 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
MDM2-216ENST00000471946 IRX5P78411 483 aaPredicted RBP9.91□□□□□ -0.82
MDM2-216ENST00000471946 IER5LQ5T953 404 aa9.91□□□□□ -0.82
MDM2-216ENST00000471946 DPY19L2Q6NUT2 758 aa9.91□□□□□ -0.82
MDM2-216ENST00000471946 OCEL1Q9H607 264 aa9.9□□□□□ -0.82
MDM2-216ENST00000471946 COLQQ9Y215 455 aaPredicted RBP9.88□□□□□ -0.83
MDM2-216ENST00000471946 SEC24BO95487 1268 aa9.87□□□□□ -0.83
MDM2-216ENST00000471946 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
MDM2-216ENST00000471946 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
MDM2-216ENST00000471946 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
MDM2-216ENST00000471946 PLCG2P16885 1265 aa9.84□□□□□ -0.83
MDM2-216ENST00000471946 CADPS2Q86UW7 1296 aa9.83□□□□□ -0.84
MDM2-216ENST00000471946 L3MBTL3Q96JM7 780 aaPredicted RBP9.77□□□□□ -0.85
MDM2-216ENST00000471946 BOLA1Q9Y3E2 137 aa9.77□□□□□ -0.85
MDM2-216ENST00000471946 MICALL2Q8IY33 904 aa9.76□□□□□ -0.85
MDM2-216ENST00000471946 TMEM121BQ9BXQ6 578 aaPredicted RBP9.74□□□□□ -0.85
MDM2-216ENST00000471946 G3V3G9 751 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms