RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.37
PCCB-210ENST00000471595 KDM2AQ9Y2K7 1162 aa17.33■□□□□ 0.36
PCCB-210ENST00000471595 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
PCCB-210ENST00000471595 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
PCCB-210ENST00000471595 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
PCCB-210ENST00000471595 SOGA1O94964 1423 aa17.29■□□□□ 0.36
PCCB-210ENST00000471595 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCCB-210ENST00000471595 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
PCCB-210ENST00000471595 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
PCCB-210ENST00000471595 IRX6P78412 446 aaPredicted RBP17.26■□□□□ 0.35
PCCB-210ENST00000471595 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
PCCB-210ENST00000471595 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
PCCB-210ENST00000471595 HSP90AA1P07900 732 aaKnown RBP17.25■□□□□ 0.35
PCCB-210ENST00000471595 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
PCCB-210ENST00000471595 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
PCCB-210ENST00000471595 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
PCCB-210ENST00000471595 VPS8Q8N3P4 1428 aa17.24■□□□□ 0.35
PCCB-210ENST00000471595 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
PCCB-210ENST00000471595 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
PCCB-210ENST00000471595 NBR1Q14596 966 aa17.2■□□□□ 0.34
PCCB-210ENST00000471595 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
PCCB-210ENST00000471595 SIN3AQ96ST3 1273 aa17.18■□□□□ 0.34
PCCB-210ENST00000471595 DDRGK1Q96HY6 314 aa17.16■□□□□ 0.34
PCCB-210ENST00000471595 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
PCCB-210ENST00000471595 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
PCCB-210ENST00000471595 ABCC8Q09428 1581 aa17.14■□□□□ 0.34
PCCB-210ENST00000471595 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
PCCB-210ENST00000471595 CUX2O14529 1486 aa17.13■□□□□ 0.33
PCCB-210ENST00000471595 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
PCCB-210ENST00000471595 ANP32EQ9BTT0 268 aa17.12■□□□□ 0.33
PCCB-210ENST00000471595 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
PCCB-210ENST00000471595 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
PCCB-210ENST00000471595 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
PCCB-210ENST00000471595 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
PCCB-210ENST00000471595 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
PCCB-210ENST00000471595 ARHGAP35Q9NRY4 1499 aa17.06■□□□□ 0.32
PCCB-210ENST00000471595 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
PCCB-210ENST00000471595 RGL3Q3MIN7 710 aa17.06■□□□□ 0.32
PCCB-210ENST00000471595 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
PCCB-210ENST00000471595 BECN1Q14457 450 aa17.06■□□□□ 0.32
PCCB-210ENST00000471595 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
PCCB-210ENST00000471595 WIZO95785 1651 aa17.02■□□□□ 0.32
PCCB-210ENST00000471595 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
PCCB-210ENST00000471595 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
PCCB-210ENST00000471595 KANK4Q5T7N3 995 aaPredicted RBP17■□□□□ 0.31
PCCB-210ENST00000471595 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
PCCB-210ENST00000471595 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
PCCB-210ENST00000471595 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
PCCB-210ENST00000471595 GLIPR1L2Q4G1C9 344 aa16.95■□□□□ 0.3
PCCB-210ENST00000471595 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
PCCB-210ENST00000471595 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
PCCB-210ENST00000471595 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
PCCB-210ENST00000471595 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
PCCB-210ENST00000471595 TMF1P82094 1093 aa16.89■□□□□ 0.29
PCCB-210ENST00000471595 ARXQ96QS3 562 aa16.87■□□□□ 0.29
PCCB-210ENST00000471595 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
PCCB-210ENST00000471595 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
PCCB-210ENST00000471595 B4GALNT3Q6L9W6 998 aa16.86■□□□□ 0.29
PCCB-210ENST00000471595 FTSJ3Q8IY81 847 aaKnown RBP16.86■□□□□ 0.29
PCCB-210ENST00000471595 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
PCCB-210ENST00000471595 GOLGA6L22H0YM25 854 aa16.86■□□□□ 0.29
PCCB-210ENST00000471595 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
PCCB-210ENST00000471595 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
PCCB-210ENST00000471595 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
PCCB-210ENST00000471595 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
PCCB-210ENST00000471595 MS4A1P11836 297 aa16.83■□□□□ 0.28
PCCB-210ENST00000471595 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
PCCB-210ENST00000471595 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
PCCB-210ENST00000471595 PLPPR3Q6T4P5 718 aa16.81■□□□□ 0.28
PCCB-210ENST00000471595 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
PCCB-210ENST00000471595 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
PCCB-210ENST00000471595 KANK1Q14678 1352 aa16.8■□□□□ 0.28
PCCB-210ENST00000471595 RBM19Q9Y4C8 960 aaKnown RBP16.8■□□□□ 0.28
PCCB-210ENST00000471595 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
PCCB-210ENST00000471595 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
PCCB-210ENST00000471595 NCLP19338 710 aaKnown RBP16.79■□□□□ 0.28
PCCB-210ENST00000471595 PKD2Q13563 968 aa16.79■□□□□ 0.28
PCCB-210ENST00000471595 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
PCCB-210ENST00000471595 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
PCCB-210ENST00000471595 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
PCCB-210ENST00000471595 CARMIL2Q6F5E8 1435 aa16.77■□□□□ 0.28
PCCB-210ENST00000471595 RGS3P49796 1198 aa16.77■□□□□ 0.28
PCCB-210ENST00000471595 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
PCCB-210ENST00000471595 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
PCCB-210ENST00000471595 RALBP1Q15311 655 aa16.76■□□□□ 0.27
PCCB-210ENST00000471595 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
PCCB-210ENST00000471595 FRAT1Q92837 279 aaPredicted RBP16.75■□□□□ 0.27
PCCB-210ENST00000471595 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
PCCB-210ENST00000471595 ANKRD30AQ9BXX3 1397 aa16.74■□□□□ 0.27
PCCB-210ENST00000471595 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
PCCB-210ENST00000471595 POGKQ9P215 609 aa16.73■□□□□ 0.27
PCCB-210ENST00000471595 FHOD3Q2V2M9 1422 aa16.71■□□□□ 0.27
PCCB-210ENST00000471595 FOXD1Q16676 465 aa16.71■□□□□ 0.27
PCCB-210ENST00000471595 TDRD9Q8NDG6 1382 aaKnown RBP16.71■□□□□ 0.27
PCCB-210ENST00000471595 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
PCCB-210ENST00000471595 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
PCCB-210ENST00000471595 ROCK2O75116 1388 aaKnown RBP16.69■□□□□ 0.26
PCCB-210ENST00000471595 NUP155O75694 1391 aa16.69■□□□□ 0.26
PCCB-210ENST00000471595 CCDC18Q5T9S5 1454 aa16.68■□□□□ 0.26
PCCB-210ENST00000471595 TNNT2P45379 298 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms