RNA–Protein interactions for RNA: ENST00000470782.5

NCOR1-214, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 3,987 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-214ENST00000470782 FANCIQ9NVI1 1328 aa11.11□□□□□ -0.63
NCOR1-214ENST00000470782 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
NCOR1-214ENST00000470782 NOP58Q9Y2X3 529 aaKnown RBP11.09□□□□□ -0.63
NCOR1-214ENST00000470782 CUX1P39880 1505 aa11.08□□□□□ -0.64
NCOR1-214ENST00000470782 HMGXB3Q12766 1538 aa11.05□□□□□ -0.64
NCOR1-214ENST00000470782 HNRNPUL2Q1KMD3 747 aaKnown RBP11.04□□□□□ -0.64
NCOR1-214ENST00000470782 CFTRP13569 1480 aa11.02□□□□□ -0.65
NCOR1-214ENST00000470782 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
NCOR1-214ENST00000470782 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
NCOR1-214ENST00000470782 IRX6P78412 446 aaPredicted RBP11.01□□□□□ -0.65
NCOR1-214ENST00000470782 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
NCOR1-214ENST00000470782 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
NCOR1-214ENST00000470782 ZMYND15Q9H091 742 aa10.99□□□□□ -0.65
NCOR1-214ENST00000470782 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
NCOR1-214ENST00000470782 RAD54L2Q9Y4B4 1467 aa10.97□□□□□ -0.65
NCOR1-214ENST00000470782 NEFMP07197 916 aa10.97□□□□□ -0.65
NCOR1-214ENST00000470782 CADPSQ9ULU8 1353 aa10.97□□□□□ -0.65
NCOR1-214ENST00000470782 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
NCOR1-214ENST00000470782 CEP162Q5TB80 1403 aa10.94□□□□□ -0.66
NCOR1-214ENST00000470782 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
NCOR1-214ENST00000470782 PDE4CQ08493 712 aa10.91□□□□□ -0.66
NCOR1-214ENST00000470782 KCNH8Q96L42 1107 aa10.91□□□□□ -0.66
NCOR1-214ENST00000470782 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
NCOR1-214ENST00000470782 FANCD2Q9BXW9 1451 aa10.9□□□□□ -0.66
NCOR1-214ENST00000470782 NPM2Q86SE8 214 aaKnown RBP10.9□□□□□ -0.66
NCOR1-214ENST00000470782 LAS1LQ9Y4W2 734 aaKnown RBP10.9□□□□□ -0.67
NCOR1-214ENST00000470782 FGD5Q6ZNL6 1462 aa10.89□□□□□ -0.67
NCOR1-214ENST00000470782 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
NCOR1-214ENST00000470782 BRPF3Q9ULD4 1205 aa10.89□□□□□ -0.67
NCOR1-214ENST00000470782 URB2Q14146 1524 aaKnown RBP10.87□□□□□ -0.67
NCOR1-214ENST00000470782 KIF21AQ7Z4S6 1674 aa10.86□□□□□ -0.67
NCOR1-214ENST00000470782 P3H3Q8IVL6 736 aa10.85□□□□□ -0.67
NCOR1-214ENST00000470782 TDRD9Q8NDG6 1382 aaKnown RBP10.85□□□□□ -0.67
NCOR1-214ENST00000470782 CUX2O14529 1486 aa10.85□□□□□ -0.67
NCOR1-214ENST00000470782 HSP90AA2PQ14568 343 aaPredicted RBP10.84□□□□□ -0.67
NCOR1-214ENST00000470782 NAP1L5Q96NT1 182 aaPredicted RBP10.83□□□□□ -0.68
NCOR1-214ENST00000470782 IGF1RP08069 1367 aa10.82□□□□□ -0.68
NCOR1-214ENST00000470782 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
NCOR1-214ENST00000470782 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
NCOR1-214ENST00000470782 TOPBP1Q92547 1522 aa10.81□□□□□ -0.68
NCOR1-214ENST00000470782 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
NCOR1-214ENST00000470782 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
NCOR1-214ENST00000470782 DDX10Q13206 875 aaKnown RBP10.8□□□□□ -0.68
NCOR1-214ENST00000470782 IPO9Q96P70 1041 aaKnown RBP10.8□□□□□ -0.68
NCOR1-214ENST00000470782 PRXQ9BXM0 1461 aa10.79□□□□□ -0.68
NCOR1-214ENST00000470782 RBM10P98175 930 aaKnown RBP10.79□□□□□ -0.68
NCOR1-214ENST00000470782 B4GALNT3Q6L9W6 998 aa10.79□□□□□ -0.68
NCOR1-214ENST00000470782 HSP90AA1P07900 732 aaKnown RBP10.78□□□□□ -0.68
NCOR1-214ENST00000470782 ARAP1Q96P48 1450 aa10.77□□□□□ -0.68
NCOR1-214ENST00000470782 ANP32CO43423 234 aa10.77□□□□□ -0.68
NCOR1-214ENST00000470782 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.68
NCOR1-214ENST00000470782 PRDM2Q13029 1718 aa10.77□□□□□ -0.68
NCOR1-214ENST00000470782 PPP4R2Q9NY27 417 aa10.77□□□□□ -0.69
NCOR1-214ENST00000470782 CLIP1P30622 1438 aa10.76□□□□□ -0.69
NCOR1-214ENST00000470782 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
NCOR1-214ENST00000470782 KIF21BO75037 1637 aa10.75□□□□□ -0.69
NCOR1-214ENST00000470782 CEP164Q9UPV0 1460 aa10.75□□□□□ -0.69
NCOR1-214ENST00000470782 PPM1GO15355 546 aaPredicted RBP10.75□□□□□ -0.69
NCOR1-214ENST00000470782 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.698e-7■■■■■ 28.7
NCOR1-214ENST00000470782 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
NCOR1-214ENST00000470782 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
NCOR1-214ENST00000470782 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
NCOR1-214ENST00000470782 KIF27Q86VH2 1401 aa10.72□□□□□ -0.69
NCOR1-214ENST00000470782 FGD1P98174 961 aa10.71□□□□□ -0.69
NCOR1-214ENST00000470782 GSE1Q14687 1217 aa10.71□□□□□ -0.69
NCOR1-214ENST00000470782 USP35Q9P2H5 1018 aa10.71□□□□□ -0.69
NCOR1-214ENST00000470782 ARID3CA6NKF2 412 aa10.71□□□□□ -0.7
NCOR1-214ENST00000470782 CARMIL1Q5VZK9 1371 aa10.7□□□□□ -0.7
NCOR1-214ENST00000470782 ARHGAP35Q9NRY4 1499 aa10.69□□□□□ -0.7
NCOR1-214ENST00000470782 EEA1Q15075 1411 aa10.69□□□□□ -0.7
NCOR1-214ENST00000470782 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
NCOR1-214ENST00000470782 ARXQ96QS3 562 aa10.68□□□□□ -0.7
NCOR1-214ENST00000470782 C11orf95C9JLR9 678 aaPredicted RBP10.68□□□□□ -0.7
NCOR1-214ENST00000470782 AAMPQ13685 434 aa10.67□□□□□ -0.7
NCOR1-214ENST00000470782 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
NCOR1-214ENST00000470782 LAMC3Q9Y6N6 1575 aa10.66□□□□□ -0.7
NCOR1-214ENST00000470782 FAM43AQ8N2R8 423 aa10.66□□□□□ -0.7
NCOR1-214ENST00000470782 RRP9O43818 475 aaKnown RBP10.64□□□□□ -0.71
NCOR1-214ENST00000470782 FHOD3Q2V2M9 1422 aa10.64□□□□□ -0.71
NCOR1-214ENST00000470782 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
NCOR1-214ENST00000470782 ATP1B4Q9UN42 357 aaPredicted RBP10.63□□□□□ -0.71
NCOR1-214ENST00000470782 TARBP1Q13395 1621 aaKnown RBP10.63□□□□□ -0.71
NCOR1-214ENST00000470782 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
NCOR1-214ENST00000470782 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
NCOR1-214ENST00000470782 FRAT1Q92837 279 aaPredicted RBP10.62□□□□□ -0.71
NCOR1-214ENST00000470782 WASHC2AQ641Q2 1341 aa10.61□□□□□ -0.71
NCOR1-214ENST00000470782 PDS5BQ9NTI5 1447 aa10.6□□□□□ -0.71
NCOR1-214ENST00000470782 WASHC2CQ9Y4E1 1318 aa10.58□□□□□ -0.72
NCOR1-214ENST00000470782 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
NCOR1-214ENST00000470782 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
NCOR1-214ENST00000470782 HIRIP3Q9BW71 556 aaPredicted RBP10.58□□□□□ -0.72
NCOR1-214ENST00000470782 ABCA5Q8WWZ7 1642 aa10.58□□□□□ -0.72
NCOR1-214ENST00000470782 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
NCOR1-214ENST00000470782 FBLN2P98095 1184 aa10.55□□□□□ -0.72
NCOR1-214ENST00000470782 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
NCOR1-214ENST00000470782 RGS3P49796 1198 aa10.54□□□□□ -0.72
NCOR1-214ENST00000470782 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
NCOR1-214ENST00000470782 CCER2I3L3R5 266 aa10.54□□□□□ -0.72
NCOR1-214ENST00000470782 LRRIQ1Q96JM4 1722 aa10.54□□□□□ -0.72
NCOR1-214ENST00000470782 TAF7LQ5H9L4 462 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms