RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
SSB-209ENST00000470621 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
SSB-209ENST00000470621 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
SSB-209ENST00000470621 NUBP1P53384 320 aa15.66■□□□□ 0.1
SSB-209ENST00000470621 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
SSB-209ENST00000470621 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
SSB-209ENST00000470621 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
SSB-209ENST00000470621 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
SSB-209ENST00000470621 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
SSB-209ENST00000470621 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
SSB-209ENST00000470621 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
SSB-209ENST00000470621 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
SSB-209ENST00000470621 POTEB2H3BUK9 544 aa15.55■□□□□ 0.08
SSB-209ENST00000470621 ATMINO43313 823 aaPredicted RBP15.52■□□□□ 0.08
SSB-209ENST00000470621 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
SSB-209ENST00000470621 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
SSB-209ENST00000470621 PKD2Q13563 968 aa15.49■□□□□ 0.07
SSB-209ENST00000470621 KIF12Q96FN5 646 aa15.49■□□□□ 0.07
SSB-209ENST00000470621 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
SSB-209ENST00000470621 SLC39A7Q92504 469 aa15.47■□□□□ 0.07
SSB-209ENST00000470621 FAM212AQ96EL1 285 aa15.47■□□□□ 0.07
SSB-209ENST00000470621 METRNQ9UJH8 293 aa15.47■□□□□ 0.07
SSB-209ENST00000470621 C7P10643 843 aa15.45■□□□□ 0.06
SSB-209ENST00000470621 GSE1Q14687 1217 aa15.41■□□□□ 0.06
SSB-209ENST00000470621 ATN1P54259 1190 aaPredicted RBP15.39■□□□□ 0.05
SSB-209ENST00000470621 MAP3K13O43283 966 aa15.38■□□□□ 0.05
SSB-209ENST00000470621 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
SSB-209ENST00000470621 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
SSB-209ENST00000470621 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
SSB-209ENST00000470621 TIE1P35590 1138 aa15.33■□□□□ 0.04
SSB-209ENST00000470621 PYGBP11216 843 aa15.32■□□□□ 0.04
SSB-209ENST00000470621 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
SSB-209ENST00000470621 MAMSTRQ6ZN01 415 aa15.27■□□□□ 0.04
SSB-209ENST00000470621 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.04
SSB-209ENST00000470621 RGL2O15211 777 aa15.24■□□□□ 0.03
SSB-209ENST00000470621 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
SSB-209ENST00000470621 RNF25Q96BH1 459 aaPredicted RBP15.24■□□□□ 0.03
SSB-209ENST00000470621 POTEFA5A3E0 1075 aa15.22■□□□□ 0.03
SSB-209ENST00000470621 TTLL13PA6NNM8 815 aa15.22■□□□□ 0.03
SSB-209ENST00000470621 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
SSB-209ENST00000470621 CHRM1P11229 460 aaPredicted RBP15.2■□□□□ 0.02
SSB-209ENST00000470621 SCUBE2Q9NQ36 999 aa15.17■□□□□ 0.02
SSB-209ENST00000470621 POTEMA6NI47 508 aa15.14■□□□□ 0.01
SSB-209ENST00000470621 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
SSB-209ENST00000470621 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
SSB-209ENST00000470621 IER5LQ5T953 404 aa15.11■□□□□ 0.01
SSB-209ENST00000470621 PLSCR2Q9NRY7 297 aa15.11■□□□□ 0.01
SSB-209ENST00000470621 PCDHB8Q9UN66 801 aa15.11■□□□□ 0.01
SSB-209ENST00000470621 COLQQ9Y215 455 aaPredicted RBP15.11■□□□□ 0.01
SSB-209ENST00000470621 SEC24BO95487 1268 aa15.1■□□□□ 0.01
SSB-209ENST00000470621 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
SSB-209ENST00000470621 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
SSB-209ENST00000470621 RIOK3O14730 519 aaKnown RBP15.08■□□□□ 0
SSB-209ENST00000470621 ZNF467Q7Z7K2 595 aaPredicted RBP15.03■□□□□ -0
SSB-209ENST00000470621 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
SSB-209ENST00000470621 LCE2DQ5TA82 110 aaPredicted RBP14.99□□□□□ -0.01
SSB-209ENST00000470621 VGFO15240 615 aaPredicted RBP14.97□□□□□ -0.01
SSB-209ENST00000470621 FAM163AQ96GL9 167 aaPredicted RBP14.97□□□□□ -0.01
SSB-209ENST00000470621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.96□□□□□ -0.01
SSB-209ENST00000470621 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
SSB-209ENST00000470621 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
SSB-209ENST00000470621 PSEN1P49768 467 aa14.92□□□□□ -0.02
SSB-209ENST00000470621 PDAP1Q13442 181 aaKnown RBP14.92□□□□□ -0.02
SSB-209ENST00000470621 CHGAP10645 457 aaKnown RBP14.91□□□□□ -0.02
SSB-209ENST00000470621 PLCG2P16885 1265 aa14.91□□□□□ -0.02
SSB-209ENST00000470621 IRX5P78411 483 aaPredicted RBP14.89□□□□□ -0.03
SSB-209ENST00000470621 STK25O00506 426 aa14.88□□□□□ -0.03
SSB-209ENST00000470621 TAOK2Q9UL54 1235 aa14.87□□□□□ -0.03
SSB-209ENST00000470621 HS6ST3Q8IZP7 471 aa14.86□□□□□ -0.03
SSB-209ENST00000470621 BCL11BQ9C0K0 894 aaPredicted RBP14.86□□□□□ -0.03
SSB-209ENST00000470621 STK24Q9Y6E0 443 aa14.84□□□□□ -0.03
SSB-209ENST00000470621 SLAIN1Q8ND83 568 aa14.82□□□□□ -0.04
SSB-209ENST00000470621 OCEL1Q9H607 264 aa14.82□□□□□ -0.04
SSB-209ENST00000470621 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
SSB-209ENST00000470621 NKX1-1Q15270 411 aaPredicted RBP14.73□□□□□ -0.05
SSB-209ENST00000470621 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
SSB-209ENST00000470621 EFCAB3Q8N7B9 438 aa14.69□□□□□ -0.06
SSB-209ENST00000470621 BBXQ8WY36 941 aaPredicted RBP14.69□□□□□ -0.06
SSB-209ENST00000470621 ST18O60284 1047 aa14.67□□□□□ -0.06
SSB-209ENST00000470621 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
SSB-209ENST00000470621 PDCD7Q8N8D1 485 aaKnown RBP14.66□□□□□ -0.06
SSB-209ENST00000470621 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.66□□□□□ -0.06
SSB-209ENST00000470621 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
SSB-209ENST00000470621 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
SSB-209ENST00000470621 MFRPQ9BY79 579 aa14.61□□□□□ -0.07
SSB-209ENST00000470621 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
SSB-209ENST00000470621 SNPHO15079 494 aa14.58□□□□□ -0.08
SSB-209ENST00000470621 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
SSB-209ENST00000470621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.57□□□□□ -0.082e-8■■■■□ 21
SSB-209ENST00000470621 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.57□□□□□ -0.08
SSB-209ENST00000470621 PAXIP1Q6ZW49 1069 aaPredicted RBP14.55□□□□□ -0.08
SSB-209ENST00000470621 TMEM121BQ9BXQ6 578 aaPredicted RBP14.55□□□□□ -0.08
SSB-209ENST00000470621 GTPBP6O43824 516 aaPredicted RBP14.54□□□□□ -0.08
SSB-209ENST00000470621 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
SSB-209ENST00000470621 FBXO22Q8NEZ5 403 aa14.54□□□□□ -0.08
SSB-209ENST00000470621 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
SSB-209ENST00000470621 SOX12O15370 315 aa14.53□□□□□ -0.08
SSB-209ENST00000470621 ILDR1Q86SU0 546 aaPredicted RBP14.52□□□□□ -0.09
SSB-209ENST00000470621 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.09
SSB-209ENST00000470621 PLCB2Q00722 1185 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms