RNA–Protein interactions for RNA: ENST00000470432.5

ECM1-204, Transcript of extracellular matrix protein 1, humanhuman

TSL 2

Gene ECM1, Length 3,066 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-204ENST00000470432 CUX1P39880 1505 aa17.5■□□□□ 0.39
ECM1-204ENST00000470432 ARHGAP35Q9NRY4 1499 aa17.47■□□□□ 0.39
ECM1-204ENST00000470432 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
ECM1-204ENST00000470432 MAP3K1Q13233 1512 aa17.4■□□□□ 0.38
ECM1-204ENST00000470432 URB2Q14146 1524 aaKnown RBP17.4■□□□□ 0.38
ECM1-204ENST00000470432 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
ECM1-204ENST00000470432 MAPKBP1O60336 1514 aa17.39■□□□□ 0.37
ECM1-204ENST00000470432 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
ECM1-204ENST00000470432 ITGAEP38570 1179 aa17.36■□□□□ 0.37
ECM1-204ENST00000470432 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
ECM1-204ENST00000470432 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
ECM1-204ENST00000470432 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
ECM1-204ENST00000470432 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
ECM1-204ENST00000470432 IGF1RP08069 1367 aa17.3■□□□□ 0.36
ECM1-204ENST00000470432 KCNH8Q96L42 1107 aa17.3■□□□□ 0.36
ECM1-204ENST00000470432 LRRC9Q6ZRR7 1453 aa17.29■□□□□ 0.36
ECM1-204ENST00000470432 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
ECM1-204ENST00000470432 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.35
ECM1-204ENST00000470432 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
ECM1-204ENST00000470432 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
ECM1-204ENST00000470432 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
ECM1-204ENST00000470432 DDX10Q13206 875 aaKnown RBP17.22■□□□□ 0.35
ECM1-204ENST00000470432 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
ECM1-204ENST00000470432 CFAP43Q8NDM7 1665 aa17.21■□□□□ 0.35
ECM1-204ENST00000470432 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
ECM1-204ENST00000470432 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
ECM1-204ENST00000470432 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
ECM1-204ENST00000470432 ANP32EQ9BTT0 268 aa17.2■□□□□ 0.34
ECM1-204ENST00000470432 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
ECM1-204ENST00000470432 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
ECM1-204ENST00000470432 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
ECM1-204ENST00000470432 FKBP8Q14318 412 aa17.16■□□□□ 0.34
ECM1-204ENST00000470432 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
ECM1-204ENST00000470432 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
ECM1-204ENST00000470432 ABCA10Q8WWZ4 1543 aa17.13■□□□□ 0.33
ECM1-204ENST00000470432 BCANQ96GW7 911 aa17.12■□□□□ 0.33
ECM1-204ENST00000470432 ANP32CO43423 234 aa17.1■□□□□ 0.33
ECM1-204ENST00000470432 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
ECM1-204ENST00000470432 NEFLP07196 543 aa17.09■□□□□ 0.33
ECM1-204ENST00000470432 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
ECM1-204ENST00000470432 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
ECM1-204ENST00000470432 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
ECM1-204ENST00000470432 CASKIN1Q8WXD9 1431 aa17.06■□□□□ 0.32
ECM1-204ENST00000470432 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
ECM1-204ENST00000470432 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
ECM1-204ENST00000470432 HIRIP3Q9BW71 556 aaPredicted RBP17.03■□□□□ 0.32
ECM1-204ENST00000470432 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
ECM1-204ENST00000470432 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
ECM1-204ENST00000470432 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
ECM1-204ENST00000470432 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
ECM1-204ENST00000470432 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
ECM1-204ENST00000470432 PBRM1Q86U86 1689 aa17■□□□□ 0.31
ECM1-204ENST00000470432 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
ECM1-204ENST00000470432 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
ECM1-204ENST00000470432 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
ECM1-204ENST00000470432 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
ECM1-204ENST00000470432 CCDC18Q5T9S5 1454 aa16.98■□□□□ 0.31
ECM1-204ENST00000470432 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
ECM1-204ENST00000470432 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
ECM1-204ENST00000470432 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
ECM1-204ENST00000470432 FMN1Q68DA7 1419 aa16.96■□□□□ 0.31
ECM1-204ENST00000470432 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
ECM1-204ENST00000470432 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
ECM1-204ENST00000470432 CUL7Q14999 1698 aa16.95■□□□□ 0.3
ECM1-204ENST00000470432 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
ECM1-204ENST00000470432 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
ECM1-204ENST00000470432 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
ECM1-204ENST00000470432 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
ECM1-204ENST00000470432 NAIPQ13075 1403 aa16.89■□□□□ 0.29
ECM1-204ENST00000470432 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
ECM1-204ENST00000470432 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
ECM1-204ENST00000470432 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
ECM1-204ENST00000470432 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
ECM1-204ENST00000470432 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
ECM1-204ENST00000470432 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
ECM1-204ENST00000470432 SAMD9Q5K651 1589 aa16.84■□□□□ 0.29
ECM1-204ENST00000470432 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
ECM1-204ENST00000470432 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.28
ECM1-204ENST00000470432 CHD1O14646 1710 aa16.83■□□□□ 0.28
ECM1-204ENST00000470432 SUPT6HQ7KZ85 1726 aaKnown RBP16.83■□□□□ 0.28
ECM1-204ENST00000470432 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
ECM1-204ENST00000470432 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
ECM1-204ENST00000470432 WASHC2AQ641Q2 1341 aa16.79■□□□□ 0.28
ECM1-204ENST00000470432 FANCIQ9NVI1 1328 aa16.79■□□□□ 0.28
ECM1-204ENST00000470432 BCL11AQ9H165 835 aa16.78■□□□□ 0.28
ECM1-204ENST00000470432 CDK11AQ9UQ88 783 aaPredicted RBP16.78■□□□□ 0.28
ECM1-204ENST00000470432 ARHGEF11O15085 1522 aa16.77■□□□□ 0.27
ECM1-204ENST00000470432 UGGT2Q9NYU1 1516 aa16.77■□□□□ 0.27
ECM1-204ENST00000470432 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.27
ECM1-204ENST00000470432 MSH5O43196 834 aa16.76■□□□□ 0.27
ECM1-204ENST00000470432 GCC2Q8IWJ2 1684 aa16.76■□□□□ 0.27
ECM1-204ENST00000470432 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
ECM1-204ENST00000470432 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
ECM1-204ENST00000470432 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
ECM1-204ENST00000470432 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
ECM1-204ENST00000470432 AKNAQ7Z591 1439 aa16.73■□□□□ 0.27
ECM1-204ENST00000470432 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
ECM1-204ENST00000470432 CNTLNQ9NXG0 1405 aa16.72■□□□□ 0.27
ECM1-204ENST00000470432 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
ECM1-204ENST00000470432 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms