RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
SREBF1-209ENST00000470247 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
SREBF1-209ENST00000470247 KIAA0586Q9BVV6 1533 aa18.28■□□□□ 0.52
SREBF1-209ENST00000470247 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
SREBF1-209ENST00000470247 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
SREBF1-209ENST00000470247 CTTNBP2Q8WZ74 1663 aa18.2■□□□□ 0.5
SREBF1-209ENST00000470247 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
SREBF1-209ENST00000470247 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
SREBF1-209ENST00000470247 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-209ENST00000470247 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
SREBF1-209ENST00000470247 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
SREBF1-209ENST00000470247 CLIP1P30622 1438 aa18.11■□□□□ 0.49
SREBF1-209ENST00000470247 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
SREBF1-209ENST00000470247 DISP1Q96F81 1524 aa18.11■□□□□ 0.49
SREBF1-209ENST00000470247 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-209ENST00000470247 P3H3Q8IVL6 736 aa18.07■□□□□ 0.48
SREBF1-209ENST00000470247 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
SREBF1-209ENST00000470247 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
SREBF1-209ENST00000470247 EFCAB5A4FU69 1503 aa18.04■□□□□ 0.48
SREBF1-209ENST00000470247 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
SREBF1-209ENST00000470247 CARMIL2Q6F5E8 1435 aa18.03■□□□□ 0.48
SREBF1-209ENST00000470247 KIAA0556O60303 1618 aa18.02■□□□□ 0.48
SREBF1-209ENST00000470247 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.48
SREBF1-209ENST00000470247 ARHGEF11O15085 1522 aa17.96■□□□□ 0.47
SREBF1-209ENST00000470247 PTPRGP23470 1445 aa17.94■□□□□ 0.46
SREBF1-209ENST00000470247 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
SREBF1-209ENST00000470247 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-209ENST00000470247 FMN1Q68DA7 1419 aa17.89■□□□□ 0.46
SREBF1-209ENST00000470247 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.45
SREBF1-209ENST00000470247 RIMBP3CA6NJZ7 1639 aa17.88■□□□□ 0.45
SREBF1-209ENST00000470247 RIMBP3BA6NNM3 1639 aa17.88■□□□□ 0.45
SREBF1-209ENST00000470247 RIMBP3Q9UFD9 1639 aa17.88■□□□□ 0.45
SREBF1-209ENST00000470247 PLB1Q6P1J6 1458 aa17.86■□□□□ 0.45
SREBF1-209ENST00000470247 ABCA8O94911 1581 aa17.84■□□□□ 0.45
SREBF1-209ENST00000470247 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
SREBF1-209ENST00000470247 UACAQ9BZF9 1416 aa17.83■□□□□ 0.45
SREBF1-209ENST00000470247 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
SREBF1-209ENST00000470247 PCF11O94913 1555 aaKnown RBP17.79■□□□□ 0.44
SREBF1-209ENST00000470247 UHRF1BP1LA0JNW5 1464 aa17.79■□□□□ 0.44
SREBF1-209ENST00000470247 NUP153P49790 1475 aaKnown RBP17.79■□□□□ 0.44
SREBF1-209ENST00000470247 RAPGEF6Q8TEU7 1601 aa17.78■□□□□ 0.44
SREBF1-209ENST00000470247 FYCO1Q9BQS8 1478 aa17.77■□□□□ 0.44
SREBF1-209ENST00000470247 ATP1B4Q9UN42 357 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-209ENST00000470247 ABCC2Q92887 1545 aa17.76■□□□□ 0.43
SREBF1-209ENST00000470247 ATP10BO94823 1461 aa17.74■□□□□ 0.43
SREBF1-209ENST00000470247 ADCY10Q96PN6 1610 aa17.73■□□□□ 0.43
SREBF1-209ENST00000470247 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
SREBF1-209ENST00000470247 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
SREBF1-209ENST00000470247 HECW1Q76N89 1606 aa17.71■□□□□ 0.43
SREBF1-209ENST00000470247 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
SREBF1-209ENST00000470247 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
SREBF1-209ENST00000470247 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
SREBF1-209ENST00000470247 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
SREBF1-209ENST00000470247 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-209ENST00000470247 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
SREBF1-209ENST00000470247 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
SREBF1-209ENST00000470247 APLP2Q06481 763 aa17.63■□□□□ 0.41
SREBF1-209ENST00000470247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
SREBF1-209ENST00000470247 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
SREBF1-209ENST00000470247 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
SREBF1-209ENST00000470247 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
SREBF1-209ENST00000470247 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
SREBF1-209ENST00000470247 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
SREBF1-209ENST00000470247 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
SREBF1-209ENST00000470247 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
SREBF1-209ENST00000470247 PPARGC1BQ86YN6 1023 aaKnown RBP17.59■□□□□ 0.41
SREBF1-209ENST00000470247 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-209ENST00000470247 TROQ12816 1431 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-209ENST00000470247 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
SREBF1-209ENST00000470247 MTUS2Q5JR59 1369 aa17.54■□□□□ 0.4
SREBF1-209ENST00000470247 MAPKBP1O60336 1514 aa17.52■□□□□ 0.4
SREBF1-209ENST00000470247 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
SREBF1-209ENST00000470247 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
SREBF1-209ENST00000470247 KCNH8Q96L42 1107 aa17.5■□□□□ 0.39
SREBF1-209ENST00000470247 NCOA2Q15596 1464 aa17.46■□□□□ 0.39
SREBF1-209ENST00000470247 ABCC10Q5T3U5 1492 aa17.46■□□□□ 0.39
SREBF1-209ENST00000470247 KIF14Q15058 1648 aa17.46■□□□□ 0.39
SREBF1-209ENST00000470247 PHLDB1Q86UU1 1377 aa17.43■□□□□ 0.38
SREBF1-209ENST00000470247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.42■□□□□ 0.38
SREBF1-209ENST00000470247 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
SREBF1-209ENST00000470247 GPATCH8Q9UKJ3 1502 aaKnown RBP17.39■□□□□ 0.37
SREBF1-209ENST00000470247 GLI2P10070 1586 aa17.38■□□□□ 0.37
SREBF1-209ENST00000470247 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
SREBF1-209ENST00000470247 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
SREBF1-209ENST00000470247 ABCA9Q8IUA7 1624 aa17.37■□□□□ 0.37
SREBF1-209ENST00000470247 CCNB3Q8WWL7 1395 aa17.37■□□□□ 0.37
SREBF1-209ENST00000470247 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
SREBF1-209ENST00000470247 MYOM3Q5VTT5 1437 aa17.36■□□□□ 0.37
SREBF1-209ENST00000470247 PLCH2O75038 1416 aa17.35■□□□□ 0.37
SREBF1-209ENST00000470247 CD109Q6YHK3 1445 aa17.33■□□□□ 0.36
SREBF1-209ENST00000470247 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
SREBF1-209ENST00000470247 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
SREBF1-209ENST00000470247 CDC42BPAQ5VT25 1732 aa17.31■□□□□ 0.36
SREBF1-209ENST00000470247 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-209ENST00000470247 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
SREBF1-209ENST00000470247 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
SREBF1-209ENST00000470247 ZNF644Q9H582 1327 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-209ENST00000470247 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
SREBF1-209ENST00000470247 ARAP3Q8WWN8 1544 aa17.28■□□□□ 0.36
SREBF1-209ENST00000470247 CDC42BPBQ9Y5S2 1711 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms