RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 TNIKQ9UKE5 1360 aa33.82■■■■□ 3
BRAF-202ENST00000469930 UBTFP17480 764 aaKnown RBP33.8■■■■□ 3
BRAF-202ENST00000469930 CTTNBP2Q8WZ74 1663 aa33.8■■■■□ 3
BRAF-202ENST00000469930 LOC105371045A0A1W2PR82 267 aa33.79■■■■□ 3
BRAF-202ENST00000469930 CLASP1Q7Z460 1538 aa33.78■■■■□ 3
BRAF-202ENST00000469930 IQGAP2Q13576 1575 aa33.72■■■□□ 2.99
BRAF-202ENST00000469930 EHMT2Q96KQ7 1210 aa33.68■■■□□ 2.98
BRAF-202ENST00000469930 SHROOM2Q13796 1616 aa33.63■■■□□ 2.97
BRAF-202ENST00000469930 UGGT2Q9NYU1 1516 aa33.63■■■□□ 2.97
BRAF-202ENST00000469930 JPH4Q96JJ6 628 aa33.62■■■□□ 2.97
BRAF-202ENST00000469930 EFCAB5A4FU69 1503 aa33.48■■■□□ 2.95
BRAF-202ENST00000469930 SAMD9Q5K651 1589 aa33.47■■■□□ 2.95
BRAF-202ENST00000469930 CEP162Q5TB80 1403 aa33.45■■■□□ 2.95
BRAF-202ENST00000469930 PRG4Q92954 1404 aaPredicted RBP33.45■■■□□ 2.94
BRAF-202ENST00000469930 DISP1Q96F81 1524 aa33.44■■■□□ 2.94
BRAF-202ENST00000469930 CARMIL2Q6F5E8 1435 aa33.44■■■□□ 2.94
BRAF-202ENST00000469930 CLIP1P30622 1438 aa33.43■■■□□ 2.94
BRAF-202ENST00000469930 ARHGAP35Q9NRY4 1499 aa33.39■■■□□ 2.94
BRAF-202ENST00000469930 KIAA0556O60303 1618 aa33.39■■■□□ 2.93
BRAF-202ENST00000469930 RANGAP1P46060 587 aaPredicted RBP33.28■■■□□ 2.92
BRAF-202ENST00000469930 ERCC6L2Q5T890 1561 aa33.28■■■□□ 2.92
BRAF-202ENST00000469930 ARHGEF11O15085 1522 aa33.25■■■□□ 2.91
BRAF-202ENST00000469930 ARAP1Q96P48 1450 aa33.23■■■□□ 2.91
BRAF-202ENST00000469930 FHOD3Q2V2M9 1422 aa33.2■■■□□ 2.91
BRAF-202ENST00000469930 P3H3Q8IVL6 736 aa33.19■■■□□ 2.9
BRAF-202ENST00000469930 PTPRGP23470 1445 aa33.17■■■□□ 2.9
BRAF-202ENST00000469930 FMN1Q68DA7 1419 aa33.16■■■□□ 2.9
BRAF-202ENST00000469930 RIMBP3CA6NJZ7 1639 aa33.15■■■□□ 2.9
BRAF-202ENST00000469930 RIMBP3BA6NNM3 1639 aa33.15■■■□□ 2.9
BRAF-202ENST00000469930 RIMBP3Q9UFD9 1639 aa33.15■■■□□ 2.9
BRAF-202ENST00000469930 VPS8Q8N3P4 1428 aa33.04■■■□□ 2.88
BRAF-202ENST00000469930 ABCA8O94911 1581 aa33.01■■■□□ 2.88
BRAF-202ENST00000469930 CASKIN1Q8WXD9 1431 aa32.99■■■□□ 2.87
BRAF-202ENST00000469930 UACAQ9BZF9 1416 aa32.99■■■□□ 2.87
BRAF-202ENST00000469930 UHRF1BP1LA0JNW5 1464 aa32.98■■■□□ 2.87
BRAF-202ENST00000469930 PLB1Q6P1J6 1458 aa32.95■■■□□ 2.87
BRAF-202ENST00000469930 RAPGEF6Q8TEU7 1601 aa32.95■■■□□ 2.86
BRAF-202ENST00000469930 FYCO1Q9BQS8 1478 aa32.93■■■□□ 2.86
BRAF-202ENST00000469930 ABCC2Q92887 1545 aa32.92■■■□□ 2.86
BRAF-202ENST00000469930 TTBK1Q5TCY1 1321 aaPredicted RBP32.9■■■□□ 2.86
BRAF-202ENST00000469930 PCF11O94913 1555 aaKnown RBP32.87■■■□□ 2.85
BRAF-202ENST00000469930 HECW1Q76N89 1606 aa32.86■■■□□ 2.85
BRAF-202ENST00000469930 CYB5RLQ6IPT4 315 aa32.85■■■□□ 2.85
BRAF-202ENST00000469930 NUP153P49790 1475 aaKnown RBP32.85■■■□□ 2.85
BRAF-202ENST00000469930 ADCY10Q96PN6 1610 aa32.81■■■□□ 2.84
BRAF-202ENST00000469930 KDM5BQ9UGL1 1544 aa32.79■■■□□ 2.84
BRAF-202ENST00000469930 CCDC18Q5T9S5 1454 aa32.77■■■□□ 2.84
BRAF-202ENST00000469930 MAP3K1Q13233 1512 aa32.77■■■□□ 2.84
BRAF-202ENST00000469930 EPRSP07814 1512 aaKnown RBP32.76■■■□□ 2.83
BRAF-202ENST00000469930 ATP10BO94823 1461 aa32.74■■■□□ 2.83
BRAF-202ENST00000469930 LRRIQ1Q96JM4 1722 aa32.69■■■□□ 2.82
BRAF-202ENST00000469930 ATP1B4Q9UN42 357 aaPredicted RBP32.69■■■□□ 2.82
BRAF-202ENST00000469930 NPM1P06748 294 aaKnown RBP eCLIP32.64■■■□□ 2.82
BRAF-202ENST00000469930 ZCCHC11Q5TAX3 1644 aaKnown RBP32.64■■■□□ 2.82
BRAF-202ENST00000469930 TIAM1Q13009 1591 aa32.62■■■□□ 2.81
BRAF-202ENST00000469930 APLP2Q06481 763 aa32.62■■■□□ 2.81
BRAF-202ENST00000469930 CFAP43Q8NDM7 1665 aa32.62■■■□□ 2.81
BRAF-202ENST00000469930 CDK13Q14004 1512 aaKnown RBP32.61■■■□□ 2.81
BRAF-202ENST00000469930 CDK11AQ9UQ88 783 aaPredicted RBP32.6■■■□□ 2.81
BRAF-202ENST00000469930 MAPKBP1O60336 1514 aa32.54■■■□□ 2.8
BRAF-202ENST00000469930 PLEKHD1A6NEE1 506 aa32.52■■■□□ 2.8
BRAF-202ENST00000469930 ARID3CA6NKF2 412 aa32.52■■■□□ 2.8
BRAF-202ENST00000469930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.52■■■□□ 2.8
BRAF-202ENST00000469930 HNRNPUL2Q1KMD3 747 aaKnown RBP32.52■■■□□ 2.8
BRAF-202ENST00000469930 LRRC9Q6ZRR7 1453 aa32.49■■■□□ 2.79
BRAF-202ENST00000469930 TROQ12816 1431 aaPredicted RBP32.48■■■□□ 2.79
BRAF-202ENST00000469930 ASXL2Q76L83 1435 aa32.46■■■□□ 2.79
BRAF-202ENST00000469930 MAGI3Q5TCQ9 1506 aa32.46■■■□□ 2.79
BRAF-202ENST00000469930 WDR7Q9Y4E6 1490 aa32.45■■■□□ 2.79
BRAF-202ENST00000469930 EHBP1L1Q8N3D4 1523 aa32.45■■■□□ 2.78
BRAF-202ENST00000469930 MTUS2Q5JR59 1369 aa32.44■■■□□ 2.78
BRAF-202ENST00000469930 KANK4Q5T7N3 995 aaPredicted RBP32.42■■■□□ 2.78
BRAF-202ENST00000469930 KIF14Q15058 1648 aa32.29■■■□□ 2.76
BRAF-202ENST00000469930 SUPT6HQ7KZ85 1726 aaKnown RBP32.29■■■□□ 2.76
BRAF-202ENST00000469930 ABCC10Q5T3U5 1492 aa32.27■■■□□ 2.76
BRAF-202ENST00000469930 GLI2P10070 1586 aa32.27■■■□□ 2.76
BRAF-202ENST00000469930 NCOA2Q15596 1464 aa32.24■■■□□ 2.75
BRAF-202ENST00000469930 KCNH8Q96L42 1107 aa32.23■■■□□ 2.75
BRAF-202ENST00000469930 ABCA9Q8IUA7 1624 aa32.22■■■□□ 2.75
BRAF-202ENST00000469930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.21■■■□□ 2.754e-6■■■□□ 15.9
BRAF-202ENST00000469930 DIP2BQ9P265 1576 aa32.19■■■□□ 2.74
BRAF-202ENST00000469930 PPARGC1BQ86YN6 1023 aaKnown RBP32.13■■■□□ 2.73
BRAF-202ENST00000469930 TTC37Q6PGP7 1564 aa32.12■■■□□ 2.73
BRAF-202ENST00000469930 ARAP3Q8WWN8 1544 aa32.12■■■□□ 2.73
BRAF-202ENST00000469930 GPATCH8Q9UKJ3 1502 aaKnown RBP32.11■■■□□ 2.73
BRAF-202ENST00000469930 CCNB3Q8WWL7 1395 aa32.11■■■□□ 2.73
BRAF-202ENST00000469930 FAM69CQ0P6D2 419 aa32.09■■■□□ 2.73
BRAF-202ENST00000469930 PLCH2O75038 1416 aa32.09■■■□□ 2.73
BRAF-202ENST00000469930 PHLDB1Q86UU1 1377 aa32.08■■■□□ 2.73
BRAF-202ENST00000469930 MAP3K4Q9Y6R4 1608 aa32.08■■■□□ 2.73
BRAF-202ENST00000469930 MYOM3Q5VTT5 1437 aa32.08■■■□□ 2.73
BRAF-202ENST00000469930 KIF13AQ9H1H9 1805 aa32.07■■■□□ 2.73
BRAF-202ENST00000469930 CD109Q6YHK3 1445 aa32.06■■■□□ 2.72
BRAF-202ENST00000469930 MIA2Q96PC5 1412 aa32.06■■■□□ 2.72
BRAF-202ENST00000469930 CDC42BPAQ5VT25 1732 aa32.06■■■□□ 2.72
BRAF-202ENST00000469930 ITSN2Q9NZM3 1697 aa32.05■■■□□ 2.72
BRAF-202ENST00000469930 MYO5CQ9NQX4 1742 aa32.05■■■□□ 2.72
BRAF-202ENST00000469930 PREX2Q70Z35 1606 aa32.04■■■□□ 2.72
BRAF-202ENST00000469930 CDC42BPBQ9Y5S2 1711 aa31.99■■■□□ 2.71
BRAF-202ENST00000469930 FGD6Q6ZV73 1430 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms