RNA–Protein interactions for RNA: ENST00000469669.5

EWSR1-215, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-215ENST00000469669 FANCIQ9NVI1 1328 aa23.47■■□□□ 1.35
EWSR1-215ENST00000469669 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
EWSR1-215ENST00000469669 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
EWSR1-215ENST00000469669 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
EWSR1-215ENST00000469669 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
EWSR1-215ENST00000469669 PRKCSHP14314 528 aaPredicted RBP23.37■■□□□ 1.33
EWSR1-215ENST00000469669 DEKP35659 375 aaKnown RBP23.34■■□□□ 1.33
EWSR1-215ENST00000469669 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
EWSR1-215ENST00000469669 HNRNPUQ00839 825 aaKnown RBP eCLIP23.33■■□□□ 1.33
EWSR1-215ENST00000469669 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
EWSR1-215ENST00000469669 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
EWSR1-215ENST00000469669 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
EWSR1-215ENST00000469669 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
EWSR1-215ENST00000469669 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
EWSR1-215ENST00000469669 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
EWSR1-215ENST00000469669 CUX1P39880 1505 aa23.2■■□□□ 1.31
EWSR1-215ENST00000469669 NBR1Q14596 966 aa23.2■■□□□ 1.3
EWSR1-215ENST00000469669 CFTRP13569 1480 aa23.18■■□□□ 1.3
EWSR1-215ENST00000469669 MYT1LQ9UL68 1186 aa23.18■■□□□ 1.3
EWSR1-215ENST00000469669 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.3
EWSR1-215ENST00000469669 TIMELESSQ9UNS1 1208 aa23.14■■□□□ 1.3
EWSR1-215ENST00000469669 PHLDB1Q86UU1 1377 aa23.14■■□□□ 1.29
EWSR1-215ENST00000469669 PPP4R2Q9NY27 417 aa23.13■■□□□ 1.29
EWSR1-215ENST00000469669 TONSLQ96HA7 1378 aa23.08■■□□□ 1.29
EWSR1-215ENST00000469669 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
EWSR1-215ENST00000469669 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
EWSR1-215ENST00000469669 NOP58Q9Y2X3 529 aaKnown RBP23.07■■□□□ 1.28
EWSR1-215ENST00000469669 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
EWSR1-215ENST00000469669 ANO8Q9HCE9 1232 aaPredicted RBP23.06■■□□□ 1.28
EWSR1-215ENST00000469669 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
EWSR1-215ENST00000469669 KIF27Q86VH2 1401 aa23.03■■□□□ 1.28
EWSR1-215ENST00000469669 LRRC9Q6ZRR7 1453 aa23.02■■□□□ 1.28
EWSR1-215ENST00000469669 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
EWSR1-215ENST00000469669 CCDC184Q52MB2 194 aa23■■□□□ 1.27
EWSR1-215ENST00000469669 ERICH6BQ5W0A0 696 aa23■■□□□ 1.27
EWSR1-215ENST00000469669 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
EWSR1-215ENST00000469669 FAM9BQ8IZU0 186 aa22.96■■□□□ 1.27
EWSR1-215ENST00000469669 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
EWSR1-215ENST00000469669 WASHC2AQ641Q2 1341 aa22.91■■□□□ 1.26
EWSR1-215ENST00000469669 MAP3K1Q13233 1512 aa22.9■■□□□ 1.26
EWSR1-215ENST00000469669 SALL2Q9Y467 1007 aaPredicted RBP22.9■■□□□ 1.26
EWSR1-215ENST00000469669 HSPA5P11021 654 aaKnown RBP22.86■■□□□ 1.25
EWSR1-215ENST00000469669 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
EWSR1-215ENST00000469669 FGD5Q6ZNL6 1462 aa22.83■■□□□ 1.24
EWSR1-215ENST00000469669 MRS2Q9HD23 443 aa22.82■■□□□ 1.24
EWSR1-215ENST00000469669 RTN4Q9NQC3 1192 aaKnown RBP22.82■■□□□ 1.24
EWSR1-215ENST00000469669 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
EWSR1-215ENST00000469669 IL27Q8NEV9 243 aa22.82■■□□□ 1.24
EWSR1-215ENST00000469669 ANP32AP39687 249 aaKnown RBP22.81■■□□□ 1.24
EWSR1-215ENST00000469669 CCDC18Q5T9S5 1454 aa22.81■■□□□ 1.24
EWSR1-215ENST00000469669 IPO9Q96P70 1041 aaKnown RBP22.79■■□□□ 1.24
EWSR1-215ENST00000469669 CCDC136Q96JN2 1154 aa22.79■■□□□ 1.24
EWSR1-215ENST00000469669 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
EWSR1-215ENST00000469669 NESP48681 1621 aa22.78■■□□□ 1.24
EWSR1-215ENST00000469669 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
EWSR1-215ENST00000469669 ZBED9Q6R2W3 1325 aa22.78■■□□□ 1.24
EWSR1-215ENST00000469669 PCF11O94913 1555 aaKnown RBP22.77■■□□□ 1.24
EWSR1-215ENST00000469669 IGF1RP08069 1367 aa22.75■■□□□ 1.23
EWSR1-215ENST00000469669 PRKRIP1Q9H875 184 aaPredicted RBP22.75■■□□□ 1.23
EWSR1-215ENST00000469669 CFAP43Q8NDM7 1665 aa22.75■■□□□ 1.23
EWSR1-215ENST00000469669 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
EWSR1-215ENST00000469669 AKNAQ7Z591 1439 aa22.72■■□□□ 1.23
EWSR1-215ENST00000469669 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
EWSR1-215ENST00000469669 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
EWSR1-215ENST00000469669 SENP3-EIF4A1A0A087X0R7 540 aa22.72■■□□□ 1.23
EWSR1-215ENST00000469669 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
EWSR1-215ENST00000469669 C11orf95C9JLR9 678 aaPredicted RBP22.71■■□□□ 1.23
EWSR1-215ENST00000469669 EIF4G2P78344 907 aaKnown RBP eCLIP22.71■■□□□ 1.23
EWSR1-215ENST00000469669 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
EWSR1-215ENST00000469669 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
EWSR1-215ENST00000469669 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.222e-8■■■■□ 19.5
EWSR1-215ENST00000469669 FHOD3Q2V2M9 1422 aa22.67■■□□□ 1.22
EWSR1-215ENST00000469669 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
EWSR1-215ENST00000469669 FGD6Q6ZV73 1430 aa22.66■■□□□ 1.22
EWSR1-215ENST00000469669 NPM2Q86SE8 214 aaKnown RBP22.66■■□□□ 1.22
EWSR1-215ENST00000469669 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
EWSR1-215ENST00000469669 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
EWSR1-215ENST00000469669 NCOA2Q15596 1464 aa22.65■■□□□ 1.22
EWSR1-215ENST00000469669 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
EWSR1-215ENST00000469669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
EWSR1-215ENST00000469669 PTPN23Q9H3S7 1636 aa22.64■■□□□ 1.22
EWSR1-215ENST00000469669 DNMBPQ6XZF7 1577 aa22.61■■□□□ 1.21
EWSR1-215ENST00000469669 LAS1LQ9Y4W2 734 aaKnown RBP22.61■■□□□ 1.21
EWSR1-215ENST00000469669 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
EWSR1-215ENST00000469669 NAIPQ13075 1403 aa22.6■■□□□ 1.21
EWSR1-215ENST00000469669 CCDC7Q96M83 1385 aa22.6■■□□□ 1.21
EWSR1-215ENST00000469669 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
EWSR1-215ENST00000469669 RRP7BPQ9NSQ0 103 aa22.57■■□□□ 1.2
EWSR1-215ENST00000469669 NEFMP07197 916 aa22.56■■□□□ 1.2
EWSR1-215ENST00000469669 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
EWSR1-215ENST00000469669 NUDCQ9Y266 331 aa22.55■■□□□ 1.2
EWSR1-215ENST00000469669 SMG6Q86US8 1419 aaKnown RBP22.55■■□□□ 1.2
EWSR1-215ENST00000469669 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
EWSR1-215ENST00000469669 NCOA1Q15788 1441 aa22.53■■□□□ 1.2
EWSR1-215ENST00000469669 MTUS2Q5JR59 1369 aa22.53■■□□□ 1.2
EWSR1-215ENST00000469669 L3MBTL2Q969R5 705 aa22.53■■□□□ 1.2
EWSR1-215ENST00000469669 FMN1Q68DA7 1419 aa22.53■■□□□ 1.2
EWSR1-215ENST00000469669 FOXD1Q16676 465 aa22.52■■□□□ 1.2
EWSR1-215ENST00000469669 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
EWSR1-215ENST00000469669 CASKIN1Q8WXD9 1431 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms