RNA–Protein interactions for RNA: ENST00000469108.1

CDK5-202, Transcript of cyclin dependent kinase 5, humanhuman

TSL 3

Gene CDK5, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-202ENST00000469108 KIAA0586Q9BVV6 1533 aa38.02■■■■□ 3.68
CDK5-202ENST00000469108 PRG4Q92954 1404 aaPredicted RBP38■■■■□ 3.67
CDK5-202ENST00000469108 JPH4Q96JJ6 628 aa37.98■■■■□ 3.67
CDK5-202ENST00000469108 RAPGEF2Q9Y4G8 1499 aa37.91■■■■□ 3.66
CDK5-202ENST00000469108 IQGAP2Q13576 1575 aa37.84■■■■□ 3.65
CDK5-202ENST00000469108 PRXQ9BXM0 1461 aa37.73■■■■□ 3.63
CDK5-202ENST00000469108 CTTNBP2Q8WZ74 1663 aa37.72■■■■□ 3.63
CDK5-202ENST00000469108 TRHP20396 242 aaPredicted RBP37.61■■■■□ 3.61
CDK5-202ENST00000469108 UGGT2Q9NYU1 1516 aa37.61■■■■□ 3.61
CDK5-202ENST00000469108 EEA1Q15075 1411 aa37.61■■■■□ 3.61
CDK5-202ENST00000469108 CARMIL2Q6F5E8 1435 aa37.61■■■■□ 3.61
CDK5-202ENST00000469108 ADCY10Q96PN6 1610 aa37.56■■■■□ 3.6
CDK5-202ENST00000469108 DISP1Q96F81 1524 aa37.56■■■■□ 3.6
CDK5-202ENST00000469108 CSRNP3Q8WYN3 585 aa37.54■■■■□ 3.6
CDK5-202ENST00000469108 CHIC1Q5VXU3 224 aa37.52■■■■□ 3.6
CDK5-202ENST00000469108 TNIKQ9UKE5 1360 aa37.5■■■■□ 3.59
CDK5-202ENST00000469108 KIAA0556O60303 1618 aa37.49■■■■□ 3.59
CDK5-202ENST00000469108 PTPRGP23470 1445 aa37.48■■■■□ 3.59
CDK5-202ENST00000469108 MAPKBP1O60336 1514 aa37.35■■■■□ 3.57
CDK5-202ENST00000469108 TTBK1Q5TCY1 1321 aaPredicted RBP37.35■■■■□ 3.57
CDK5-202ENST00000469108 KIF13AQ9H1H9 1805 aa37.34■■■■□ 3.57
CDK5-202ENST00000469108 GOLGA3Q08378 1498 aa37.33■■■■□ 3.57
CDK5-202ENST00000469108 FAM9AQ8IZU1 332 aaPredicted RBP37.33■■■■□ 3.57
CDK5-202ENST00000469108 KIF21BO75037 1637 aa37.32■■■■□ 3.57
CDK5-202ENST00000469108 NPM1P06748 294 aaKnown RBP eCLIP37.31■■■■□ 3.56
CDK5-202ENST00000469108 UHRF1BP1LA0JNW5 1464 aa37.27■■■■□ 3.56
CDK5-202ENST00000469108 UACAQ9BZF9 1416 aa37.25■■■■□ 3.55
CDK5-202ENST00000469108 ABCC2Q92887 1545 aa37.25■■■■□ 3.55
CDK5-202ENST00000469108 SAMD9Q5K651 1589 aa37.17■■■■□ 3.54
CDK5-202ENST00000469108 ABCC10Q5T3U5 1492 aa37.17■■■■□ 3.54
CDK5-202ENST00000469108 DIP2BQ9P265 1576 aa37.17■■■■□ 3.54
CDK5-202ENST00000469108 KDM5BQ9UGL1 1544 aa37.1■■■■□ 3.53
CDK5-202ENST00000469108 ZCCHC11Q5TAX3 1644 aaKnown RBP37.09■■■■□ 3.53
CDK5-202ENST00000469108 ABCA8O94911 1581 aa37.08■■■■□ 3.53
CDK5-202ENST00000469108 PLB1Q6P1J6 1458 aa37.08■■■■□ 3.53
CDK5-202ENST00000469108 FAM69CQ0P6D2 419 aa37.02■■■■□ 3.52
CDK5-202ENST00000469108 ASXL2Q76L83 1435 aa37.02■■■■□ 3.52
CDK5-202ENST00000469108 P3H3Q8IVL6 736 aa36.96■■■■□ 3.51
CDK5-202ENST00000469108 EFCAB5A4FU69 1503 aa36.92■■■■□ 3.5
CDK5-202ENST00000469108 GLI2P10070 1586 aa36.9■■■■□ 3.5
CDK5-202ENST00000469108 TSPOAP1O95153 1857 aa36.9■■■■□ 3.5
CDK5-202ENST00000469108 RANGAP1P46060 587 aaPredicted RBP36.88■■■■□ 3.49
CDK5-202ENST00000469108 RAPGEF6Q8TEU7 1601 aa36.85■■■■□ 3.49
CDK5-202ENST00000469108 EHMT2Q96KQ7 1210 aa36.85■■■■□ 3.49
CDK5-202ENST00000469108 UBTFP17480 764 aaKnown RBP36.84■■■■□ 3.49
CDK5-202ENST00000469108 FHOD3Q2V2M9 1422 aa36.84■■■■□ 3.49
CDK5-202ENST00000469108 EPRSP07814 1512 aaKnown RBP36.81■■■■□ 3.48
CDK5-202ENST00000469108 WDR7Q9Y4E6 1490 aa36.81■■■■□ 3.48
CDK5-202ENST00000469108 MAP3K4Q9Y6R4 1608 aa36.76■■■■□ 3.48
CDK5-202ENST00000469108 PPRC1Q5VV67 1664 aaKnown RBP36.76■■■■□ 3.47
CDK5-202ENST00000469108 ATP10BO94823 1461 aa36.71■■■■□ 3.47
CDK5-202ENST00000469108 NUP153P49790 1475 aaKnown RBP36.67■■■■□ 3.46
CDK5-202ENST00000469108 ARHGAP35Q9NRY4 1499 aa36.65■■■■□ 3.46
CDK5-202ENST00000469108 KDM6BO15054 1643 aa36.63■■■■□ 3.45
CDK5-202ENST00000469108 ARID3CA6NKF2 412 aa36.63■■■■□ 3.45
CDK5-202ENST00000469108 CFAP43Q8NDM7 1665 aa36.62■■■■□ 3.45
CDK5-202ENST00000469108 TEX14Q8IWB6 1497 aa36.52■■■■□ 3.44
CDK5-202ENST00000469108 KCNH8Q96L42 1107 aa36.52■■■■□ 3.44
CDK5-202ENST00000469108 FMN1Q68DA7 1419 aa36.51■■■■□ 3.44
CDK5-202ENST00000469108 HECW1Q76N89 1606 aa36.46■■■■□ 3.43
CDK5-202ENST00000469108 ABCA9Q8IUA7 1624 aa36.46■■■■□ 3.43
CDK5-202ENST00000469108 CD109Q6YHK3 1445 aa36.45■■■■□ 3.43
CDK5-202ENST00000469108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.45■■■■□ 3.43
CDK5-202ENST00000469108 HNRNPUL2Q1KMD3 747 aaKnown RBP36.45■■■■□ 3.43
CDK5-202ENST00000469108 MAGI3Q5TCQ9 1506 aa36.44■■■■□ 3.42
CDK5-202ENST00000469108 CDK13Q14004 1512 aaKnown RBP36.39■■■■□ 3.42
CDK5-202ENST00000469108 LRRIQ1Q96JM4 1722 aa36.34■■■■□ 3.41
CDK5-202ENST00000469108 COL17A1Q9UMD9 1497 aaPredicted RBP36.32■■■■□ 3.41
CDK5-202ENST00000469108 CLIP1P30622 1438 aa36.31■■■■□ 3.4
CDK5-202ENST00000469108 PLEKHD1A6NEE1 506 aa36.3■■■■□ 3.4
CDK5-202ENST00000469108 PCF11O94913 1555 aaKnown RBP36.28■■■■□ 3.4
CDK5-202ENST00000469108 ATP1B4Q9UN42 357 aaPredicted RBP36.24■■■■□ 3.39
CDK5-202ENST00000469108 CASKIN1Q8WXD9 1431 aa36.22■■■■□ 3.39
CDK5-202ENST00000469108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.21■■■■□ 3.39
CDK5-202ENST00000469108 TTC37Q6PGP7 1564 aa36.19■■■■□ 3.38
CDK5-202ENST00000469108 ARAP3Q8WWN8 1544 aa36.15■■■■□ 3.38
CDK5-202ENST00000469108 FYCO1Q9BQS8 1478 aa36.15■■■■□ 3.38
CDK5-202ENST00000469108 CCDC18Q5T9S5 1454 aa36.13■■■■□ 3.37
CDK5-202ENST00000469108 NEO1Q92859 1461 aa36.12■■■■□ 3.37
CDK5-202ENST00000469108 PHLDB1Q86UU1 1377 aa36.1■■■■□ 3.37
CDK5-202ENST00000469108 CEP162Q5TB80 1403 aa36.09■■■■□ 3.37
CDK5-202ENST00000469108 CDK11AQ9UQ88 783 aaPredicted RBP36.09■■■■□ 3.37
CDK5-202ENST00000469108 CFAP74Q9C0B2 1584 aa36.08■■■■□ 3.37
CDK5-202ENST00000469108 KIF14Q15058 1648 aa36.08■■■■□ 3.37
CDK5-202ENST00000469108 TROQ12816 1431 aaPredicted RBP36.06■■■■□ 3.36
CDK5-202ENST00000469108 MYO5CQ9NQX4 1742 aa36.04■■■■□ 3.36
CDK5-202ENST00000469108 FANCAO15360 1455 aa35.99■■■■□ 3.35
CDK5-202ENST00000469108 LOC105371045A0A1W2PR82 267 aa35.96■■■■□ 3.35
CDK5-202ENST00000469108 FRMPD1Q5SYB0 1578 aa35.95■■■■□ 3.35
CDK5-202ENST00000469108 PLCH2O75038 1416 aa35.94■■■■□ 3.34
CDK5-202ENST00000469108 AKNAQ7Z591 1439 aa35.92■■■■□ 3.34
CDK5-202ENST00000469108 RICTORQ6R327 1708 aa35.91■■■■□ 3.34
CDK5-202ENST00000469108 AEBP2Q6ZN18 517 aaPredicted RBP35.9■■■■□ 3.34
CDK5-202ENST00000469108 RAPGEF3O95398 923 aa35.85■■■■□ 3.33
CDK5-202ENST00000469108 CDC42BPBQ9Y5S2 1711 aa35.84■■■■□ 3.33
CDK5-202ENST00000469108 DENND4BO75064 1496 aaPredicted RBP35.84■■■■□ 3.33
CDK5-202ENST00000469108 PREX2Q70Z35 1606 aa35.83■■■■□ 3.33
CDK5-202ENST00000469108 KDM4FA0A1W2PPD8 638 aa35.81■■■■□ 3.32
CDK5-202ENST00000469108 CDC42BPAQ5VT25 1732 aa35.8■■■■□ 3.32
CDK5-202ENST00000469108 ADGRL1O94910 1474 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms