RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
SND1-207ENST00000468621 IGF1RP08069 1367 aa9.08□□□□□ -0.96
SND1-207ENST00000468621 CTTNBP2Q8WZ74 1663 aa9.04□□□□□ -0.96
SND1-207ENST00000468621 HRCP23327 699 aa9.02□□□□□ -0.97
SND1-207ENST00000468621 ILDR1Q86SU0 546 aaPredicted RBP9.02□□□□□ -0.97
SND1-207ENST00000468621 CARMIL1Q5VZK9 1371 aa9.01□□□□□ -0.97
SND1-207ENST00000468621 KIAA0586Q9BVV6 1533 aa9□□□□□ -0.97
SND1-207ENST00000468621 IQGAP2Q13576 1575 aa8.99□□□□□ -0.97
SND1-207ENST00000468621 PRG4Q92954 1404 aaPredicted RBP8.98□□□□□ -0.97
SND1-207ENST00000468621 RAPGEF2Q9Y4G8 1499 aa8.98□□□□□ -0.97
SND1-207ENST00000468621 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
SND1-207ENST00000468621 PRXQ9BXM0 1461 aa8.96□□□□□ -0.98
SND1-207ENST00000468621 KIF13AQ9H1H9 1805 aa8.94□□□□□ -0.98
SND1-207ENST00000468621 ADCY10Q96PN6 1610 aa8.94□□□□□ -0.98
SND1-207ENST00000468621 UGGT2Q9NYU1 1516 aa8.92□□□□□ -0.98
SND1-207ENST00000468621 KIAA0556O60303 1618 aa8.91□□□□□ -0.98
SND1-207ENST00000468621 DISP1Q96F81 1524 aa8.91□□□□□ -0.98
SND1-207ENST00000468621 PCGF6Q9BYE7 350 aa8.91□□□□□ -0.98
SND1-207ENST00000468621 EEA1Q15075 1411 aa8.9□□□□□ -0.98
SND1-207ENST00000468621 KIF21BO75037 1637 aa8.89□□□□□ -0.99
SND1-207ENST00000468621 CARMIL2Q6F5E8 1435 aa8.88□□□□□ -0.99
SND1-207ENST00000468621 CSRNP3Q8WYN3 585 aa8.87□□□□□ -0.99
SND1-207ENST00000468621 SAMD9Q5K651 1589 aa8.86□□□□□ -0.99
SND1-207ENST00000468621 TNIKQ9UKE5 1360 aa8.86□□□□□ -0.99
SND1-207ENST00000468621 MAPKBP1O60336 1514 aa8.85□□□□□ -0.99
SND1-207ENST00000468621 TSPOAP1O95153 1857 aa8.84□□□□□ -0.99
SND1-207ENST00000468621 PTPRGP23470 1445 aa8.84□□□□□ -0.99
SND1-207ENST00000468621 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
SND1-207ENST00000468621 ABCC2Q92887 1545 aa8.83□□□□□ -1
SND1-207ENST00000468621 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
SND1-207ENST00000468621 GOLGA3Q08378 1498 aa8.83□□□□□ -1
SND1-207ENST00000468621 DIP2BQ9P265 1576 aa8.82□□□□□ -1
SND1-207ENST00000468621 UHRF1BP1LA0JNW5 1464 aa8.82□□□□□ -1
SND1-207ENST00000468621 ABCA8O94911 1581 aa8.81□□□□□ -1
SND1-207ENST00000468621 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
SND1-207ENST00000468621 UACAQ9BZF9 1416 aa8.8□□□□□ -1
SND1-207ENST00000468621 LOC105371045A0A1W2PR82 267 aa8.8□□□□□ -1
SND1-207ENST00000468621 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
SND1-207ENST00000468621 ABCC10Q5T3U5 1492 aa8.79□□□□□ -1
SND1-207ENST00000468621 PLB1Q6P1J6 1458 aa8.79□□□□□ -1
SND1-207ENST00000468621 TRIM26Q12899 539 aaPredicted RBP8.78□□□□□ -1
SND1-207ENST00000468621 PPRC1Q5VV67 1664 aaKnown RBP8.78□□□□□ -1
SND1-207ENST00000468621 RAPGEF6Q8TEU7 1601 aa8.77□□□□□ -1.01
SND1-207ENST00000468621 EFCAB5A4FU69 1503 aa8.76□□□□□ -1.01
SND1-207ENST00000468621 ASXL2Q76L83 1435 aa8.75□□□□□ -1.01
SND1-207ENST00000468621 NPM1P06748 294 aaKnown RBP eCLIP8.75□□□□□ -1.01
SND1-207ENST00000468621 MAP3K4Q9Y6R4 1608 aa8.75□□□□□ -1.01
SND1-207ENST00000468621 LRRIQ1Q96JM4 1722 aa8.74□□□□□ -1.01
SND1-207ENST00000468621 GLI2P10070 1586 aa8.74□□□□□ -1.01
SND1-207ENST00000468621 PPARGC1BQ86YN6 1023 aaKnown RBP8.74□□□□□ -1.01
SND1-207ENST00000468621 FHOD3Q2V2M9 1422 aa8.73□□□□□ -1.01
SND1-207ENST00000468621 P3H3Q8IVL6 736 aa8.73□□□□□ -1.01
SND1-207ENST00000468621 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
SND1-207ENST00000468621 EHMT2Q96KQ7 1210 aa8.72□□□□□ -1.01
SND1-207ENST00000468621 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
SND1-207ENST00000468621 EPRSP07814 1512 aaKnown RBP8.71□□□□□ -1.01
SND1-207ENST00000468621 RANGAP1P46060 587 aaPredicted RBP8.71□□□□□ -1.02
SND1-207ENST00000468621 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
SND1-207ENST00000468621 WDR7Q9Y4E6 1490 aa8.7□□□□□ -1.02
SND1-207ENST00000468621 UBTFP17480 764 aaKnown RBP8.7□□□□□ -1.02
SND1-207ENST00000468621 ZEB1P37275 1124 aaPredicted RBP8.7□□□□□ -1.02
SND1-207ENST00000468621 ATP10BO94823 1461 aa8.7□□□□□ -1.02
SND1-207ENST00000468621 NUP153P49790 1475 aaKnown RBP8.7□□□□□ -1.02
SND1-207ENST00000468621 KDM6BO15054 1643 aa8.69□□□□□ -1.02
SND1-207ENST00000468621 KDM4FA0A1W2PPD8 638 aa8.67□□□□□ -1.02
SND1-207ENST00000468621 ABCA9Q8IUA7 1624 aa8.67□□□□□ -1.02
SND1-207ENST00000468621 HECW1Q76N89 1606 aa8.66□□□□□ -1.02
SND1-207ENST00000468621 ARID3CA6NKF2 412 aa8.65□□□□□ -1.02
SND1-207ENST00000468621 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.03
SND1-207ENST00000468621 CDK13Q14004 1512 aaKnown RBP8.64□□□□□ -1.03
SND1-207ENST00000468621 FMN1Q68DA7 1419 aa8.63□□□□□ -1.03
SND1-207ENST00000468621 TTC37Q6PGP7 1564 aa8.62□□□□□ -1.03
SND1-207ENST00000468621 MAGI3Q5TCQ9 1506 aa8.62□□□□□ -1.03
SND1-207ENST00000468621 TEX14Q8IWB6 1497 aa8.62□□□□□ -1.03
SND1-207ENST00000468621 MYO5CQ9NQX4 1742 aa8.61□□□□□ -1.03
SND1-207ENST00000468621 KCNH8Q96L42 1107 aa8.61□□□□□ -1.03
SND1-207ENST00000468621 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
SND1-207ENST00000468621 CD109Q6YHK3 1445 aa8.61□□□□□ -1.03
SND1-207ENST00000468621 KIF14Q15058 1648 aa8.6□□□□□ -1.03
SND1-207ENST00000468621 CLIP1P30622 1438 aa8.6□□□□□ -1.03
SND1-207ENST00000468621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.59□□□□□ -1.03
SND1-207ENST00000468621 CDC42BPBQ9Y5S2 1711 aa8.58□□□□□ -1.04
SND1-207ENST00000468621 CASKIN1Q8WXD9 1431 aa8.58□□□□□ -1.04
SND1-207ENST00000468621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.58□□□□□ -1.04
SND1-207ENST00000468621 HNRNPUL2Q1KMD3 747 aaKnown RBP8.58□□□□□ -1.04
SND1-207ENST00000468621 FYCO1Q9BQS8 1478 aa8.57□□□□□ -1.04
SND1-207ENST00000468621 CDC42BPAQ5VT25 1732 aa8.57□□□□□ -1.04
SND1-207ENST00000468621 RICTORQ6R327 1708 aa8.57□□□□□ -1.04
SND1-207ENST00000468621 CEP162Q5TB80 1403 aa8.57□□□□□ -1.04
SND1-207ENST00000468621 CFAP74Q9C0B2 1584 aa8.56□□□□□ -1.04
SND1-207ENST00000468621 ADGRL1O94910 1474 aa8.56□□□□□ -1.04
SND1-207ENST00000468621 CCDC18Q5T9S5 1454 aa8.56□□□□□ -1.04
SND1-207ENST00000468621 FRMPD1Q5SYB0 1578 aa8.56□□□□□ -1.04
SND1-207ENST00000468621 HECW2Q9P2P5 1572 aa8.56□□□□□ -1.04
SND1-207ENST00000468621 ARAP3Q8WWN8 1544 aa8.55□□□□□ -1.04
SND1-207ENST00000468621 PLEKHD1A6NEE1 506 aa8.55□□□□□ -1.04
SND1-207ENST00000468621 NEO1Q92859 1461 aa8.54□□□□□ -1.04
SND1-207ENST00000468621 ATP1B4Q9UN42 357 aaPredicted RBP8.54□□□□□ -1.04
SND1-207ENST00000468621 PREX2Q70Z35 1606 aa8.54□□□□□ -1.04
SND1-207ENST00000468621 TROQ12816 1431 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms