RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 FAM69CQ0P6D2 419 aa33.58■■■□□ 2.97
LINC00888-201ENST00000468380 ABCC10Q5T3U5 1492 aa33.51■■■□□ 2.96
LINC00888-201ENST00000468380 NPM1P06748 294 aaKnown RBP eCLIP33.48■■■□□ 2.95
LINC00888-201ENST00000468380 RUSC2Q8N2Y8 1516 aa33.45■■■□□ 2.95
LINC00888-201ENST00000468380 MAPKBP1O60336 1514 aa33.41■■■□□ 2.94
LINC00888-201ENST00000468380 ADCY10Q96PN6 1610 aa33.38■■■□□ 2.93
LINC00888-201ENST00000468380 DIP2BQ9P265 1576 aa33.36■■■□□ 2.93
LINC00888-201ENST00000468380 KDM4FA0A1W2PPD8 638 aa33.32■■■□□ 2.92
LINC00888-201ENST00000468380 IGF1RP08069 1367 aa33.31■■■□□ 2.92
LINC00888-201ENST00000468380 KIAA0586Q9BVV6 1533 aa33.29■■■□□ 2.92
LINC00888-201ENST00000468380 KDM6BO15054 1643 aa33.2■■■□□ 2.9
LINC00888-201ENST00000468380 TSPOAP1O95153 1857 aa33.17■■■□□ 2.9
LINC00888-201ENST00000468380 PTPRGP23470 1445 aa33.13■■■□□ 2.89
LINC00888-201ENST00000468380 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
LINC00888-201ENST00000468380 TTBK1Q5TCY1 1321 aaPredicted RBP33.11■■■□□ 2.89
LINC00888-201ENST00000468380 CUL7Q14999 1698 aa33.07■■■□□ 2.88
LINC00888-201ENST00000468380 CARMIL1Q5VZK9 1371 aa33.03■■■□□ 2.88
LINC00888-201ENST00000468380 TNIKQ9UKE5 1360 aa32.99■■■□□ 2.87
LINC00888-201ENST00000468380 ABCC2Q92887 1545 aa32.98■■■□□ 2.87
LINC00888-201ENST00000468380 ASXL2Q76L83 1435 aa32.96■■■□□ 2.87
LINC00888-201ENST00000468380 CARMIL2Q6F5E8 1435 aa32.94■■■□□ 2.86
LINC00888-201ENST00000468380 PLB1Q6P1J6 1458 aa32.9■■■□□ 2.86
LINC00888-201ENST00000468380 PPRC1Q5VV67 1664 aaKnown RBP32.9■■■□□ 2.86
LINC00888-201ENST00000468380 GLI2P10070 1586 aa32.89■■■□□ 2.86
LINC00888-201ENST00000468380 ILDR1Q86SU0 546 aaPredicted RBP32.87■■■□□ 2.85
LINC00888-201ENST00000468380 UHRF1BP1LA0JNW5 1464 aa32.86■■■□□ 2.85
LINC00888-201ENST00000468380 COL17A1Q9UMD9 1497 aaPredicted RBP32.85■■■□□ 2.85
LINC00888-201ENST00000468380 UACAQ9BZF9 1416 aa32.84■■■□□ 2.85
LINC00888-201ENST00000468380 IQGAP2Q13576 1575 aa32.83■■■□□ 2.85
LINC00888-201ENST00000468380 DISP1Q96F81 1524 aa32.81■■■□□ 2.84
LINC00888-201ENST00000468380 ADGRL1O94910 1474 aa32.78■■■□□ 2.84
LINC00888-201ENST00000468380 EPRSP07814 1512 aaKnown RBP32.75■■■□□ 2.83
LINC00888-201ENST00000468380 KDM5BQ9UGL1 1544 aa32.73■■■□□ 2.83
LINC00888-201ENST00000468380 MAP3K4Q9Y6R4 1608 aa32.67■■■□□ 2.82
LINC00888-201ENST00000468380 UGGT2Q9NYU1 1516 aa32.65■■■□□ 2.82
LINC00888-201ENST00000468380 ZCCHC11Q5TAX3 1644 aaKnown RBP32.62■■■□□ 2.81
LINC00888-201ENST00000468380 RAPGEF2Q9Y4G8 1499 aa32.61■■■□□ 2.81
LINC00888-201ENST00000468380 TEX14Q8IWB6 1497 aa32.6■■■□□ 2.81
LINC00888-201ENST00000468380 KIAA0556O60303 1618 aa32.55■■■□□ 2.8
LINC00888-201ENST00000468380 WDR7Q9Y4E6 1490 aa32.5■■■□□ 2.79
LINC00888-201ENST00000468380 HECW2Q9P2P5 1572 aa32.49■■■□□ 2.79
LINC00888-201ENST00000468380 KCNH8Q96L42 1107 aa32.44■■■□□ 2.78
LINC00888-201ENST00000468380 CD109Q6YHK3 1445 aa32.42■■■□□ 2.78
LINC00888-201ENST00000468380 MAGI3Q5TCQ9 1506 aa32.38■■■□□ 2.77
LINC00888-201ENST00000468380 ABCA8O94911 1581 aa32.33■■■□□ 2.77
LINC00888-201ENST00000468380 CFAP43Q8NDM7 1665 aa32.29■■■□□ 2.76
LINC00888-201ENST00000468380 GOLGA3Q08378 1498 aa32.28■■■□□ 2.76
LINC00888-201ENST00000468380 CTTNBP2Q8WZ74 1663 aa32.26■■■□□ 2.75
LINC00888-201ENST00000468380 ARID3CA6NKF2 412 aa32.2■■■□□ 2.75
LINC00888-201ENST00000468380 KIF21BO75037 1637 aa32.17■■■□□ 2.74
LINC00888-201ENST00000468380 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
LINC00888-201ENST00000468380 ARAP3Q8WWN8 1544 aa32.16■■■□□ 2.74
LINC00888-201ENST00000468380 P3H3Q8IVL6 736 aa32.14■■■□□ 2.74
LINC00888-201ENST00000468380 ATP10BO94823 1461 aa32.13■■■□□ 2.73
LINC00888-201ENST00000468380 RAPGEF3O95398 923 aa32.06■■■□□ 2.72
LINC00888-201ENST00000468380 FBXO41Q8TF61 875 aa32.01■■■□□ 2.71
LINC00888-201ENST00000468380 PTPRMP28827 1452 aa32■■■□□ 2.71
LINC00888-201ENST00000468380 PHLDB1Q86UU1 1377 aa32■■■□□ 2.71
LINC00888-201ENST00000468380 ABCA9Q8IUA7 1624 aa31.98■■■□□ 2.71
LINC00888-201ENST00000468380 FAM9AQ8IZU1 332 aaPredicted RBP31.98■■■□□ 2.71
LINC00888-201ENST00000468380 ADAMTSL3P82987 1691 aa31.98■■■□□ 2.71
LINC00888-201ENST00000468380 NEO1Q92859 1461 aa31.89■■■□□ 2.7
LINC00888-201ENST00000468380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.87■■■□□ 2.69
LINC00888-201ENST00000468380 HNRNPUL2Q1KMD3 747 aaKnown RBP31.87■■■□□ 2.69
LINC00888-201ENST00000468380 ARID4BQ4LE39 1312 aaPredicted RBP31.85■■■□□ 2.69
LINC00888-201ENST00000468380 SAMD9Q5K651 1589 aa31.84■■■□□ 2.69
LINC00888-201ENST00000468380 FRMPD1Q5SYB0 1578 aa31.84■■■□□ 2.69
LINC00888-201ENST00000468380 RAPGEF6Q8TEU7 1601 aa31.83■■■□□ 2.69
LINC00888-201ENST00000468380 BCORL1Q5H9F3 1711 aa31.83■■■□□ 2.69
LINC00888-201ENST00000468380 CSRNP3Q8WYN3 585 aa31.81■■■□□ 2.68
LINC00888-201ENST00000468380 MADDQ8WXG6 1647 aa31.78■■■□□ 2.68
LINC00888-201ENST00000468380 NUP153P49790 1475 aaKnown RBP31.78■■■□□ 2.68
LINC00888-201ENST00000468380 LMTK3Q96Q04 1460 aa31.76■■■□□ 2.67
LINC00888-201ENST00000468380 PCF11O94913 1555 aaKnown RBP31.75■■■□□ 2.67
LINC00888-201ENST00000468380 RANGAP1P46060 587 aaPredicted RBP31.74■■■□□ 2.67
LINC00888-201ENST00000468380 PLEKHD1A6NEE1 506 aa31.69■■■□□ 2.66
LINC00888-201ENST00000468380 DENND4BO75064 1496 aaPredicted RBP31.69■■■□□ 2.66
LINC00888-201ENST00000468380 FHOD3Q2V2M9 1422 aa31.68■■■□□ 2.66
LINC00888-201ENST00000468380 AKNAQ7Z591 1439 aa31.68■■■□□ 2.66
LINC00888-201ENST00000468380 HSPA2P54652 639 aa31.66■■■□□ 2.66
LINC00888-201ENST00000468380 ARHGEF40Q8TER5 1519 aa31.65■■■□□ 2.66
LINC00888-201ENST00000468380 RIMS1Q86UR5 1692 aaKnown RBP31.64■■■□□ 2.65
LINC00888-201ENST00000468380 RICTORQ6R327 1708 aa31.63■■■□□ 2.65
LINC00888-201ENST00000468380 PLPPR3Q6T4P5 718 aa31.63■■■□□ 2.65
LINC00888-201ENST00000468380 FANCAO15360 1455 aa31.61■■■□□ 2.65
LINC00888-201ENST00000468380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.59■■■□□ 2.65
LINC00888-201ENST00000468380 YEATS2Q9ULM3 1422 aa31.57■■■□□ 2.64
LINC00888-201ENST00000468380 SIGLEC1Q9BZZ2 1709 aa31.55■■■□□ 2.64
LINC00888-201ENST00000468380 MLECQ14165 292 aa31.52■■■□□ 2.64
LINC00888-201ENST00000468380 POGZQ7Z3K3 1410 aa31.51■■■□□ 2.64
LINC00888-201ENST00000468380 ZMYM4Q5VZL5 1548 aa31.51■■■□□ 2.63
LINC00888-201ENST00000468380 TTC37Q6PGP7 1564 aa31.51■■■□□ 2.63
LINC00888-201ENST00000468380 ZFYVE16Q7Z3T8 1539 aa31.49■■■□□ 2.63
LINC00888-201ENST00000468380 CFAP74Q9C0B2 1584 aa31.47■■■□□ 2.63
LINC00888-201ENST00000468380 CERKQ8TCT0 537 aa31.45■■■□□ 2.63
LINC00888-201ENST00000468380 MAGI2Q86UL8 1455 aa31.45■■■□□ 2.62
LINC00888-201ENST00000468380 HECW1Q76N89 1606 aa31.44■■■□□ 2.62
LINC00888-201ENST00000468380 EFCAB5A4FU69 1503 aa31.44■■■□□ 2.62
LINC00888-201ENST00000468380 SCAPERQ9BY12 1400 aa31.43■■■□□ 2.62
LINC00888-201ENST00000468380 EEA1Q15075 1411 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms