RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 ERCC6L2Q5T890 1561 aa43.76■■■■■ 4.6
PDCD4-205ENST00000467574 KIAA0586Q9BVV6 1533 aa43.74■■■■■ 4.59
PDCD4-205ENST00000467574 PRXQ9BXM0 1461 aa43.72■■■■■ 4.59
PDCD4-205ENST00000467574 EEA1Q15075 1411 aa43.69■■■■■ 4.58
PDCD4-205ENST00000467574 JPH4Q96JJ6 628 aa43.6■■■■■ 4.57
PDCD4-205ENST00000467574 CYB5RLQ6IPT4 315 aa43.58■■■■■ 4.57
PDCD4-205ENST00000467574 PRG4Q92954 1404 aaPredicted RBP43.57■■■■■ 4.57
PDCD4-205ENST00000467574 IQGAP2Q13576 1575 aa43.56■■■■■ 4.56
PDCD4-205ENST00000467574 CSRNP3Q8WYN3 585 aa43.55■■■■■ 4.56
PDCD4-205ENST00000467574 CTTNBP2Q8WZ74 1663 aa43.51■■■■■ 4.56
PDCD4-205ENST00000467574 FAM9AQ8IZU1 332 aaPredicted RBP43.39■■■■■ 4.54
PDCD4-205ENST00000467574 KIF21BO75037 1637 aa43.34■■■■■ 4.53
PDCD4-205ENST00000467574 UGGT2Q9NYU1 1516 aa43.34■■■■■ 4.53
PDCD4-205ENST00000467574 DISP1Q96F81 1524 aa43.26■■■■■ 4.52
PDCD4-205ENST00000467574 CARMIL2Q6F5E8 1435 aa43.2■■■■■ 4.51
PDCD4-205ENST00000467574 KIAA0556O60303 1618 aa43.18■■■■■ 4.5
PDCD4-205ENST00000467574 TNIKQ9UKE5 1360 aa43.08■■■■■ 4.49
PDCD4-205ENST00000467574 ADCY10Q96PN6 1610 aa43.03■■■■■ 4.48
PDCD4-205ENST00000467574 PTPRGP23470 1445 aa43.03■■■■■ 4.48
PDCD4-205ENST00000467574 GOLGA3Q08378 1498 aa43■■■■■ 4.47
PDCD4-205ENST00000467574 SAMD9Q5K651 1589 aa42.95■■■■■ 4.47
PDCD4-205ENST00000467574 TTBK1Q5TCY1 1321 aaPredicted RBP42.85■■■■■ 4.45
PDCD4-205ENST00000467574 EHMT2Q96KQ7 1210 aa42.8■■■■■ 4.44
PDCD4-205ENST00000467574 UHRF1BP1LA0JNW5 1464 aa42.8■■■■■ 4.44
PDCD4-205ENST00000467574 UACAQ9BZF9 1416 aa42.79■■■■■ 4.44
PDCD4-205ENST00000467574 ABCC2Q92887 1545 aa42.78■■■■■ 4.44
PDCD4-205ENST00000467574 UBTFP17480 764 aaKnown RBP42.73■■■■■ 4.43
PDCD4-205ENST00000467574 EFCAB5A4FU69 1503 aa42.71■■■■■ 4.43
PDCD4-205ENST00000467574 MAPKBP1O60336 1514 aa42.71■■■■■ 4.43
PDCD4-205ENST00000467574 ABCA8O94911 1581 aa42.69■■■■■ 4.43
PDCD4-205ENST00000467574 PLB1Q6P1J6 1458 aa42.68■■■■■ 4.42
PDCD4-205ENST00000467574 P3H3Q8IVL6 736 aa42.66■■■■■ 4.42
PDCD4-205ENST00000467574 RANGAP1P46060 587 aaPredicted RBP42.62■■■■■ 4.41
PDCD4-205ENST00000467574 TRHP20396 242 aaPredicted RBP42.6■■■■■ 4.41
PDCD4-205ENST00000467574 FHOD3Q2V2M9 1422 aa42.6■■■■■ 4.41
PDCD4-205ENST00000467574 KDM5BQ9UGL1 1544 aa42.6■■■■■ 4.41
PDCD4-205ENST00000467574 NPM1P06748 294 aaKnown RBP eCLIP42.59■■■■■ 4.41
PDCD4-205ENST00000467574 KIF13AQ9H1H9 1805 aa42.57■■■■■ 4.4
PDCD4-205ENST00000467574 ZCCHC11Q5TAX3 1644 aaKnown RBP42.56■■■■■ 4.4
PDCD4-205ENST00000467574 ARHGAP35Q9NRY4 1499 aa42.51■■■■■ 4.4
PDCD4-205ENST00000467574 RAPGEF6Q8TEU7 1601 aa42.47■■■■■ 4.39
PDCD4-205ENST00000467574 DIP2BQ9P265 1576 aa42.46■■■■■ 4.39
PDCD4-205ENST00000467574 ABCC10Q5T3U5 1492 aa42.45■■■■■ 4.39
PDCD4-205ENST00000467574 ASXL2Q76L83 1435 aa42.41■■■■■ 4.38
PDCD4-205ENST00000467574 NUP153P49790 1475 aaKnown RBP42.31■■■■■ 4.36
PDCD4-205ENST00000467574 ATP10BO94823 1461 aa42.28■■■■■ 4.36
PDCD4-205ENST00000467574 WDR7Q9Y4E6 1490 aa42.23■■■■■ 4.35
PDCD4-205ENST00000467574 FAM69CQ0P6D2 419 aa42.23■■■■■ 4.35
PDCD4-205ENST00000467574 FMN1Q68DA7 1419 aa42.22■■■■■ 4.35
PDCD4-205ENST00000467574 GLI2P10070 1586 aa42.22■■■■■ 4.35
PDCD4-205ENST00000467574 CLIP1P30622 1438 aa42.21■■■■■ 4.35
PDCD4-205ENST00000467574 EPRSP07814 1512 aaKnown RBP42.2■■■■■ 4.35
PDCD4-205ENST00000467574 ARID3CA6NKF2 412 aa42.16■■■■■ 4.34
PDCD4-205ENST00000467574 HECW1Q76N89 1606 aa42.1■■■■■ 4.33
PDCD4-205ENST00000467574 LOC105371045A0A1W2PR82 267 aa42.1■■■■■ 4.33
PDCD4-205ENST00000467574 TSPOAP1O95153 1857 aa42.09■■■■■ 4.33
PDCD4-205ENST00000467574 MAP3K4Q9Y6R4 1608 aa42.07■■■■■ 4.33
PDCD4-205ENST00000467574 CEP162Q5TB80 1403 aa42.07■■■■■ 4.33
PDCD4-205ENST00000467574 PPRC1Q5VV67 1664 aaKnown RBP42.04■■■■■ 4.32
PDCD4-205ENST00000467574 PCF11O94913 1555 aaKnown RBP42.04■■■■■ 4.32
PDCD4-205ENST00000467574 LRRIQ1Q96JM4 1722 aa42.03■■■■■ 4.32
PDCD4-205ENST00000467574 CDK13Q14004 1512 aaKnown RBP42.02■■■■■ 4.32
PDCD4-205ENST00000467574 CASKIN1Q8WXD9 1431 aa41.95■■■■■ 4.31
PDCD4-205ENST00000467574 CFAP43Q8NDM7 1665 aa41.94■■■■■ 4.3
PDCD4-205ENST00000467574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.9■■■■■ 4.3
PDCD4-205ENST00000467574 HNRNPUL2Q1KMD3 747 aaKnown RBP41.9■■■■■ 4.3
PDCD4-205ENST00000467574 FYCO1Q9BQS8 1478 aa41.88■■■■■ 4.29
PDCD4-205ENST00000467574 KCNH8Q96L42 1107 aa41.88■■■■■ 4.29
PDCD4-205ENST00000467574 ABCA9Q8IUA7 1624 aa41.87■■■■■ 4.29
PDCD4-205ENST00000467574 ATP1B4Q9UN42 357 aaPredicted RBP41.82■■■■■ 4.29
PDCD4-205ENST00000467574 CD109Q6YHK3 1445 aa41.78■■■■■ 4.28
PDCD4-205ENST00000467574 CCDC18Q5T9S5 1454 aa41.77■■■■■ 4.28
PDCD4-205ENST00000467574 MAGI3Q5TCQ9 1506 aa41.76■■■■■ 4.28
PDCD4-205ENST00000467574 PLEKHD1A6NEE1 506 aa41.76■■■■■ 4.28
PDCD4-205ENST00000467574 TEX14Q8IWB6 1497 aa41.73■■■■■ 4.27
PDCD4-205ENST00000467574 KDM6BO15054 1643 aa41.7■■■■■ 4.27
PDCD4-205ENST00000467574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.69■■■■■ 4.269e-7■■■□□ 17.5
PDCD4-205ENST00000467574 TTC37Q6PGP7 1564 aa41.67■■■■■ 4.26
PDCD4-205ENST00000467574 TROQ12816 1431 aaPredicted RBP41.63■■■■■ 4.26
PDCD4-205ENST00000467574 KIF14Q15058 1648 aa41.62■■■■■ 4.25
PDCD4-205ENST00000467574 CDK11AQ9UQ88 783 aaPredicted RBP41.59■■■■■ 4.25
PDCD4-205ENST00000467574 VPS8Q8N3P4 1428 aa41.56■■■■■ 4.24
PDCD4-205ENST00000467574 COL17A1Q9UMD9 1497 aaPredicted RBP41.55■■■■■ 4.24
PDCD4-205ENST00000467574 MYO5CQ9NQX4 1742 aa41.46■■■■■ 4.23
PDCD4-205ENST00000467574 NEO1Q92859 1461 aa41.44■■■■■ 4.22
PDCD4-205ENST00000467574 ARAP3Q8WWN8 1544 aa41.4■■■■■ 4.22
PDCD4-205ENST00000467574 CFAP74Q9C0B2 1584 aa41.39■■■■■ 4.22
PDCD4-205ENST00000467574 PLCH2O75038 1416 aa41.37■■■■■ 4.21
PDCD4-205ENST00000467574 PHLDB1Q86UU1 1377 aa41.36■■■■■ 4.21
PDCD4-205ENST00000467574 FANCAO15360 1455 aa41.35■■■■■ 4.21
PDCD4-205ENST00000467574 TIAM1Q13009 1591 aa41.35■■■■■ 4.21
PDCD4-205ENST00000467574 EHBP1L1Q8N3D4 1523 aa41.32■■■■■ 4.2
PDCD4-205ENST00000467574 CDC42BPBQ9Y5S2 1711 aa41.3■■■■■ 4.2
PDCD4-205ENST00000467574 PREX2Q70Z35 1606 aa41.3■■■■■ 4.2
PDCD4-205ENST00000467574 CDC42BPAQ5VT25 1732 aa41.3■■■■■ 4.2
PDCD4-205ENST00000467574 MTUS2Q5JR59 1369 aa41.27■■■■■ 4.2
PDCD4-205ENST00000467574 AKNAQ7Z591 1439 aa41.26■■■■■ 4.19
PDCD4-205ENST00000467574 FRMPD1Q5SYB0 1578 aa41.25■■■■■ 4.19
PDCD4-205ENST00000467574 MAP3K1Q13233 1512 aa41.23■■■■■ 4.19
PDCD4-205ENST00000467574 ARHGAP5Q13017 1502 aa41.2■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms