RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.172e-9■■■■□ 25.7
CDCA7-206ENST00000467411 MAP3K1Q13233 1512 aa16.1■□□□□ 0.17
CDCA7-206ENST00000467411 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.17
CDCA7-206ENST00000467411 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.15
CDCA7-206ENST00000467411 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
CDCA7-206ENST00000467411 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
CDCA7-206ENST00000467411 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
CDCA7-206ENST00000467411 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
CDCA7-206ENST00000467411 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
CDCA7-206ENST00000467411 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
CDCA7-206ENST00000467411 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.15
CDCA7-206ENST00000467411 FYCO1Q9BQS8 1478 aa15.96■□□□□ 0.15
CDCA7-206ENST00000467411 TIAM1Q13009 1591 aa15.96■□□□□ 0.14
CDCA7-206ENST00000467411 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
CDCA7-206ENST00000467411 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
CDCA7-206ENST00000467411 NUP160Q12769 1436 aa15.93■□□□□ 0.14
CDCA7-206ENST00000467411 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
CDCA7-206ENST00000467411 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
CDCA7-206ENST00000467411 FMN1Q68DA7 1419 aa15.9■□□□□ 0.14
CDCA7-206ENST00000467411 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
CDCA7-206ENST00000467411 FHOD3Q2V2M9 1422 aa15.87■□□□□ 0.13
CDCA7-206ENST00000467411 DISP1Q96F81 1524 aa15.86■□□□□ 0.13
CDCA7-206ENST00000467411 CHD1O14646 1710 aa15.83■□□□□ 0.12
CDCA7-206ENST00000467411 LRRC9Q6ZRR7 1453 aa15.83■□□□□ 0.12
CDCA7-206ENST00000467411 SHROOM2Q13796 1616 aa15.82■□□□□ 0.12
CDCA7-206ENST00000467411 RRBP1Q9P2E9 1410 aaKnown RBP15.82■□□□□ 0.12
CDCA7-206ENST00000467411 HECW1Q76N89 1606 aa15.8■□□□□ 0.12
CDCA7-206ENST00000467411 CCDC18Q5T9S5 1454 aa15.77■□□□□ 0.12
CDCA7-206ENST00000467411 HRCP23327 699 aa15.76■□□□□ 0.11
CDCA7-206ENST00000467411 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
CDCA7-206ENST00000467411 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
CDCA7-206ENST00000467411 PPARGC1BQ86YN6 1023 aaKnown RBP15.75■□□□□ 0.11
CDCA7-206ENST00000467411 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
CDCA7-206ENST00000467411 APLP2Q06481 763 aa15.75■□□□□ 0.11
CDCA7-206ENST00000467411 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
CDCA7-206ENST00000467411 EHBP1L1Q8N3D4 1523 aa15.71■□□□□ 0.11
CDCA7-206ENST00000467411 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.11
CDCA7-206ENST00000467411 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
CDCA7-206ENST00000467411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDCA7-206ENST00000467411 SUPT6HQ7KZ85 1726 aaKnown RBP15.68■□□□□ 0.1
CDCA7-206ENST00000467411 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
CDCA7-206ENST00000467411 ABCA8O94911 1581 aa15.68■□□□□ 0.1
CDCA7-206ENST00000467411 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
CDCA7-206ENST00000467411 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
CDCA7-206ENST00000467411 ADCY10Q96PN6 1610 aa15.64■□□□□ 0.09
CDCA7-206ENST00000467411 NUP153P49790 1475 aaKnown RBP15.64■□□□□ 0.09
CDCA7-206ENST00000467411 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
CDCA7-206ENST00000467411 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
CDCA7-206ENST00000467411 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
CDCA7-206ENST00000467411 JPH4Q96JJ6 628 aa15.59■□□□□ 0.09
CDCA7-206ENST00000467411 TCOF1Q13428 1488 aaKnown RBP15.57■□□□□ 0.08
CDCA7-206ENST00000467411 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
CDCA7-206ENST00000467411 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
CDCA7-206ENST00000467411 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
CDCA7-206ENST00000467411 PRG4Q92954 1404 aaPredicted RBP15.54■□□□□ 0.08
CDCA7-206ENST00000467411 MYOM3Q5VTT5 1437 aa15.53■□□□□ 0.08
CDCA7-206ENST00000467411 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
CDCA7-206ENST00000467411 PLB1Q6P1J6 1458 aa15.52■□□□□ 0.08
CDCA7-206ENST00000467411 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
CDCA7-206ENST00000467411 PTPN23Q9H3S7 1636 aa15.51■□□□□ 0.07
CDCA7-206ENST00000467411 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
CDCA7-206ENST00000467411 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
CDCA7-206ENST00000467411 FBLN2P98095 1184 aa15.49■□□□□ 0.07
CDCA7-206ENST00000467411 UHRF1BP1LA0JNW5 1464 aa15.49■□□□□ 0.07
CDCA7-206ENST00000467411 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
CDCA7-206ENST00000467411 ITSN2Q9NZM3 1697 aa15.48■□□□□ 0.07
CDCA7-206ENST00000467411 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
CDCA7-206ENST00000467411 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
CDCA7-206ENST00000467411 ATP10BO94823 1461 aa15.46■□□□□ 0.07
CDCA7-206ENST00000467411 PTPRGP23470 1445 aa15.43■□□□□ 0.06
CDCA7-206ENST00000467411 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
CDCA7-206ENST00000467411 KIF14Q15058 1648 aa15.42■□□□□ 0.06
CDCA7-206ENST00000467411 ABCC10Q5T3U5 1492 aa15.42■□□□□ 0.06
CDCA7-206ENST00000467411 GCC2Q8IWJ2 1684 aa15.42■□□□□ 0.06
CDCA7-206ENST00000467411 CDC42BPAQ5VT25 1732 aa15.41■□□□□ 0.06
CDCA7-206ENST00000467411 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
CDCA7-206ENST00000467411 DNMT1P26358 1616 aaKnown RBP15.4■□□□□ 0.06
CDCA7-206ENST00000467411 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
CDCA7-206ENST00000467411 CROCC2H7BZ55 1655 aa15.39■□□□□ 0.05
CDCA7-206ENST00000467411 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
CDCA7-206ENST00000467411 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
CDCA7-206ENST00000467411 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
CDCA7-206ENST00000467411 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
CDCA7-206ENST00000467411 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
CDCA7-206ENST00000467411 SETD5Q9C0A6 1442 aa15.36■□□□□ 0.05
CDCA7-206ENST00000467411 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
CDCA7-206ENST00000467411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
CDCA7-206ENST00000467411 CDK11AQ9UQ88 783 aaPredicted RBP15.36■□□□□ 0.05
CDCA7-206ENST00000467411 GPATCH8Q9UKJ3 1502 aaKnown RBP15.36■□□□□ 0.05
CDCA7-206ENST00000467411 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
CDCA7-206ENST00000467411 PREX2Q70Z35 1606 aa15.35■□□□□ 0.05
CDCA7-206ENST00000467411 ADGBQ8N7X0 1667 aa15.33■□□□□ 0.04
CDCA7-206ENST00000467411 CDC42BPBQ9Y5S2 1711 aa15.32■□□□□ 0.04
CDCA7-206ENST00000467411 RAB3GAP2Q9H2M9 1393 aa15.31■□□□□ 0.04
CDCA7-206ENST00000467411 CCER1Q8TC90 406 aaPredicted RBP15.3■□□□□ 0.04
CDCA7-206ENST00000467411 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
CDCA7-206ENST00000467411 MAPKBP1O60336 1514 aa15.3■□□□□ 0.04
CDCA7-206ENST00000467411 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
CDCA7-206ENST00000467411 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
CDCA7-206ENST00000467411 NAIPQ13075 1403 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms