RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 KIAA0586Q9BVV6 1533 aa23.97■■□□□ 1.43
DDX56-208ENST00000467318 CLASP1Q7Z460 1538 aa23.92■■□□□ 1.42
DDX56-208ENST00000467318 LOC105371045A0A1W2PR82 267 aa23.9■■□□□ 1.42
DDX56-208ENST00000467318 CTTNBP2Q8WZ74 1663 aa23.9■■□□□ 1.42
DDX56-208ENST00000467318 IQGAP2Q13576 1575 aa23.88■■□□□ 1.41
DDX56-208ENST00000467318 TNIKQ9UKE5 1360 aa23.87■■□□□ 1.41
DDX56-208ENST00000467318 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
DDX56-208ENST00000467318 SHROOM2Q13796 1616 aa23.79■■□□□ 1.4
DDX56-208ENST00000467318 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
DDX56-208ENST00000467318 RANGAP1P46060 587 aaPredicted RBP23.76■■□□□ 1.39
DDX56-208ENST00000467318 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
DDX56-208ENST00000467318 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
DDX56-208ENST00000467318 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
DDX56-208ENST00000467318 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
DDX56-208ENST00000467318 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
DDX56-208ENST00000467318 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
DDX56-208ENST00000467318 ARHGEF11O15085 1522 aa23.66■■□□□ 1.38
DDX56-208ENST00000467318 CEP162Q5TB80 1403 aa23.65■■□□□ 1.38
DDX56-208ENST00000467318 CLIP1P30622 1438 aa23.64■■□□□ 1.37
DDX56-208ENST00000467318 SAMD9Q5K651 1589 aa23.64■■□□□ 1.37
DDX56-208ENST00000467318 KIAA0556O60303 1618 aa23.63■■□□□ 1.37
DDX56-208ENST00000467318 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
DDX56-208ENST00000467318 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
DDX56-208ENST00000467318 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
DDX56-208ENST00000467318 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
DDX56-208ENST00000467318 P3H3Q8IVL6 736 aa23.6■■□□□ 1.37
DDX56-208ENST00000467318 TTBK1Q5TCY1 1321 aaPredicted RBP23.57■■□□□ 1.36
DDX56-208ENST00000467318 PTPRGP23470 1445 aa23.54■■□□□ 1.36
DDX56-208ENST00000467318 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
DDX56-208ENST00000467318 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
DDX56-208ENST00000467318 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
DDX56-208ENST00000467318 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
DDX56-208ENST00000467318 UACAQ9BZF9 1416 aa23.39■■□□□ 1.33
DDX56-208ENST00000467318 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
DDX56-208ENST00000467318 ABCA8O94911 1581 aa23.35■■□□□ 1.33
DDX56-208ENST00000467318 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
DDX56-208ENST00000467318 UHRF1BP1LA0JNW5 1464 aa23.34■■□□□ 1.33
DDX56-208ENST00000467318 ABCC2Q92887 1545 aa23.32■■□□□ 1.32
DDX56-208ENST00000467318 RAPGEF6Q8TEU7 1601 aa23.32■■□□□ 1.32
DDX56-208ENST00000467318 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
DDX56-208ENST00000467318 ADCY10Q96PN6 1610 aa23.29■■□□□ 1.32
DDX56-208ENST00000467318 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
DDX56-208ENST00000467318 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
DDX56-208ENST00000467318 ATP1B4Q9UN42 357 aaPredicted RBP23.26■■□□□ 1.31
DDX56-208ENST00000467318 PCF11O94913 1555 aaKnown RBP23.25■■□□□ 1.31
DDX56-208ENST00000467318 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
DDX56-208ENST00000467318 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
DDX56-208ENST00000467318 HECW1Q76N89 1606 aa23.24■■□□□ 1.31
DDX56-208ENST00000467318 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
DDX56-208ENST00000467318 ATP10BO94823 1461 aa23.19■■□□□ 1.3
DDX56-208ENST00000467318 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
DDX56-208ENST00000467318 CCDC18Q5T9S5 1454 aa23.18■■□□□ 1.3
DDX56-208ENST00000467318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
DDX56-208ENST00000467318 HNRNPUL2Q1KMD3 747 aaKnown RBP23.16■■□□□ 1.3
DDX56-208ENST00000467318 APLP2Q06481 763 aa23.14■■□□□ 1.29
DDX56-208ENST00000467318 CDK11AQ9UQ88 783 aaPredicted RBP23.13■■□□□ 1.29
DDX56-208ENST00000467318 ZCCHC11Q5TAX3 1644 aaKnown RBP23.13■■□□□ 1.29
DDX56-208ENST00000467318 LRRIQ1Q96JM4 1722 aa23.13■■□□□ 1.29
DDX56-208ENST00000467318 CDK13Q14004 1512 aaKnown RBP23.11■■□□□ 1.29
DDX56-208ENST00000467318 MAP3K1Q13233 1512 aa23.1■■□□□ 1.29
DDX56-208ENST00000467318 PLEKHD1A6NEE1 506 aa23.09■■□□□ 1.29
DDX56-208ENST00000467318 MAPKBP1O60336 1514 aa23.07■■□□□ 1.28
DDX56-208ENST00000467318 ASXL2Q76L83 1435 aa23.05■■□□□ 1.28
DDX56-208ENST00000467318 TIAM1Q13009 1591 aa23.04■■□□□ 1.28
DDX56-208ENST00000467318 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
DDX56-208ENST00000467318 CFAP43Q8NDM7 1665 aa23.01■■□□□ 1.27
DDX56-208ENST00000467318 MTUS2Q5JR59 1369 aa23■■□□□ 1.27
DDX56-208ENST00000467318 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
DDX56-208ENST00000467318 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
DDX56-208ENST00000467318 MAGI3Q5TCQ9 1506 aa22.96■■□□□ 1.27
DDX56-208ENST00000467318 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
DDX56-208ENST00000467318 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
DDX56-208ENST00000467318 EHBP1L1Q8N3D4 1523 aa22.93■■□□□ 1.26
DDX56-208ENST00000467318 ABCC10Q5T3U5 1492 aa22.9■■□□□ 1.26
DDX56-208ENST00000467318 KIF14Q15058 1648 aa22.87■■□□□ 1.25
DDX56-208ENST00000467318 FAM69CQ0P6D2 419 aa22.85■■□□□ 1.25
DDX56-208ENST00000467318 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
DDX56-208ENST00000467318 GLI2P10070 1586 aa22.84■■□□□ 1.25
DDX56-208ENST00000467318 DIP2BQ9P265 1576 aa22.84■■□□□ 1.25
DDX56-208ENST00000467318 SUPT6HQ7KZ85 1726 aaKnown RBP22.83■■□□□ 1.25
DDX56-208ENST00000467318 TRHP20396 242 aaPredicted RBP22.83■■□□□ 1.24
DDX56-208ENST00000467318 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
DDX56-208ENST00000467318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.82■■□□□ 1.24
DDX56-208ENST00000467318 NCOA2Q15596 1464 aa22.81■■□□□ 1.24
DDX56-208ENST00000467318 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
DDX56-208ENST00000467318 CD109Q6YHK3 1445 aa22.77■■□□□ 1.24
DDX56-208ENST00000467318 CCNB3Q8WWL7 1395 aa22.76■■□□□ 1.23
DDX56-208ENST00000467318 TTC37Q6PGP7 1564 aa22.76■■□□□ 1.23
DDX56-208ENST00000467318 MAP3K4Q9Y6R4 1608 aa22.73■■□□□ 1.23
DDX56-208ENST00000467318 PLCH2O75038 1416 aa22.73■■□□□ 1.23
DDX56-208ENST00000467318 GPATCH8Q9UKJ3 1502 aaKnown RBP22.72■■□□□ 1.23
DDX56-208ENST00000467318 ARAP3Q8WWN8 1544 aa22.7■■□□□ 1.22
DDX56-208ENST00000467318 TSPOAP1O95153 1857 aa22.7■■□□□ 1.22
DDX56-208ENST00000467318 PHLDB1Q86UU1 1377 aa22.69■■□□□ 1.22
DDX56-208ENST00000467318 MYO5CQ9NQX4 1742 aa22.69■■□□□ 1.22
DDX56-208ENST00000467318 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
DDX56-208ENST00000467318 CFDP1Q9UEE9 299 aaPredicted RBP22.68■■□□□ 1.22
DDX56-208ENST00000467318 CDC42BPAQ5VT25 1732 aa22.67■■□□□ 1.22
DDX56-208ENST00000467318 EFCAB2Q5VUJ9 269 aa22.67■■□□□ 1.22
DDX56-208ENST00000467318 ITSN2Q9NZM3 1697 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms