RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
UBR4-211ENST00000467272 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.1
UBR4-211ENST00000467272 MAPKBP1O60336 1514 aa21.94■■□□□ 1.1
UBR4-211ENST00000467272 IGF1RP08069 1367 aa21.88■■□□□ 1.09
UBR4-211ENST00000467272 ADCY10Q96PN6 1610 aa21.88■■□□□ 1.09
UBR4-211ENST00000467272 KIAA0586Q9BVV6 1533 aa21.87■■□□□ 1.09
UBR4-211ENST00000467272 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
UBR4-211ENST00000467272 FAM69CQ0P6D2 419 aa21.85■■□□□ 1.09
UBR4-211ENST00000467272 NPM1P06748 294 aaKnown RBP eCLIP21.77■■□□□ 1.08
UBR4-211ENST00000467272 KIF27Q86VH2 1401 aa21.75■■□□□ 1.07
UBR4-211ENST00000467272 CUL7Q14999 1698 aa21.74■■□□□ 1.07
UBR4-211ENST00000467272 KDM4FA0A1W2PPD8 638 aa21.7■■□□□ 1.06
UBR4-211ENST00000467272 PTPRGP23470 1445 aa21.67■■□□□ 1.06
UBR4-211ENST00000467272 KDM6BO15054 1643 aa21.66■■□□□ 1.06
UBR4-211ENST00000467272 ABCC2Q92887 1545 aa21.65■■□□□ 1.06
UBR4-211ENST00000467272 CARMIL1Q5VZK9 1371 aa21.64■■□□□ 1.06
UBR4-211ENST00000467272 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
UBR4-211ENST00000467272 UHRF1BP1LA0JNW5 1464 aa21.61■■□□□ 1.05
UBR4-211ENST00000467272 GLI2P10070 1586 aa21.6■■□□□ 1.05
UBR4-211ENST00000467272 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
UBR4-211ENST00000467272 ASXL2Q76L83 1435 aa21.57■■□□□ 1.04
UBR4-211ENST00000467272 DISP1Q96F81 1524 aa21.56■■□□□ 1.04
UBR4-211ENST00000467272 PLB1Q6P1J6 1458 aa21.56■■□□□ 1.04
UBR4-211ENST00000467272 PPRC1Q5VV67 1664 aaKnown RBP21.56■■□□□ 1.04
UBR4-211ENST00000467272 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
UBR4-211ENST00000467272 TSPOAP1O95153 1857 aa21.52■■□□□ 1.04
UBR4-211ENST00000467272 UACAQ9BZF9 1416 aa21.52■■□□□ 1.04
UBR4-211ENST00000467272 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
UBR4-211ENST00000467272 COL17A1Q9UMD9 1497 aaPredicted RBP21.5■■□□□ 1.03
UBR4-211ENST00000467272 UGGT2Q9NYU1 1516 aa21.48■■□□□ 1.03
UBR4-211ENST00000467272 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
UBR4-211ENST00000467272 MAP3K4Q9Y6R4 1608 aa21.43■■□□□ 1.02
UBR4-211ENST00000467272 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
UBR4-211ENST00000467272 TTBK1Q5TCY1 1321 aaPredicted RBP21.41■■□□□ 1.02
UBR4-211ENST00000467272 ADGRL1O94910 1474 aa21.39■■□□□ 1.01
UBR4-211ENST00000467272 KIAA0556O60303 1618 aa21.38■■□□□ 1.01
UBR4-211ENST00000467272 ZCCHC11Q5TAX3 1644 aaKnown RBP21.36■■□□□ 1.01
UBR4-211ENST00000467272 TEX14Q8IWB6 1497 aa21.34■■□□□ 1.01
UBR4-211ENST00000467272 WDR7Q9Y4E6 1490 aa21.31■■□□□ 1
UBR4-211ENST00000467272 MAGI3Q5TCQ9 1506 aa21.26■□□□□ 0.99
UBR4-211ENST00000467272 ILDR1Q86SU0 546 aaPredicted RBP21.26■□□□□ 0.99
UBR4-211ENST00000467272 ABCA8O94911 1581 aa21.25■□□□□ 0.99
UBR4-211ENST00000467272 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
UBR4-211ENST00000467272 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
UBR4-211ENST00000467272 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
UBR4-211ENST00000467272 HECW2Q9P2P5 1572 aa21.18■□□□□ 0.98
UBR4-211ENST00000467272 CFAP43Q8NDM7 1665 aa21.17■□□□□ 0.98
UBR4-211ENST00000467272 CTTNBP2Q8WZ74 1663 aa21.16■□□□□ 0.98
UBR4-211ENST00000467272 ARAP3Q8WWN8 1544 aa21.12■□□□□ 0.97
UBR4-211ENST00000467272 KCNH8Q96L42 1107 aa21.08■□□□□ 0.97
UBR4-211ENST00000467272 ATP10BO94823 1461 aa21.07■□□□□ 0.96
UBR4-211ENST00000467272 PHLDB1Q86UU1 1377 aa21.01■□□□□ 0.95
UBR4-211ENST00000467272 ABCA9Q8IUA7 1624 aa21■□□□□ 0.95
UBR4-211ENST00000467272 KIF21BO75037 1637 aa20.99■□□□□ 0.95
UBR4-211ENST00000467272 SAMD9Q5K651 1589 aa20.97■□□□□ 0.95
UBR4-211ENST00000467272 ADAMTSL3P82987 1691 aa20.94■□□□□ 0.94
UBR4-211ENST00000467272 NEO1Q92859 1461 aa20.94■□□□□ 0.94
UBR4-211ENST00000467272 PTPRMP28827 1452 aa20.91■□□□□ 0.94
UBR4-211ENST00000467272 FRMPD1Q5SYB0 1578 aa20.9■□□□□ 0.94
UBR4-211ENST00000467272 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
UBR4-211ENST00000467272 P3H3Q8IVL6 736 aa20.9■□□□□ 0.94
UBR4-211ENST00000467272 NUP153P49790 1475 aaKnown RBP20.89■□□□□ 0.94
UBR4-211ENST00000467272 RAPGEF3O95398 923 aa20.89■□□□□ 0.93
UBR4-211ENST00000467272 RAPGEF6Q8TEU7 1601 aa20.88■□□□□ 0.93
UBR4-211ENST00000467272 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
UBR4-211ENST00000467272 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
UBR4-211ENST00000467272 BCORL1Q5H9F3 1711 aa20.81■□□□□ 0.92
UBR4-211ENST00000467272 FBXO41Q8TF61 875 aa20.8■□□□□ 0.92
UBR4-211ENST00000467272 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
UBR4-211ENST00000467272 LMTK3Q96Q04 1460 aa20.78■□□□□ 0.92
UBR4-211ENST00000467272 ARHGEF40Q8TER5 1519 aa20.77■□□□□ 0.92
UBR4-211ENST00000467272 MADDQ8WXG6 1647 aa20.76■□□□□ 0.91
UBR4-211ENST00000467272 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
UBR4-211ENST00000467272 EEA1Q15075 1411 aa20.74■□□□□ 0.91
UBR4-211ENST00000467272 RICTORQ6R327 1708 aa20.74■□□□□ 0.91
UBR4-211ENST00000467272 AKNAQ7Z591 1439 aa20.74■□□□□ 0.91
UBR4-211ENST00000467272 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
UBR4-211ENST00000467272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBR4-211ENST00000467272 ZMYM4Q5VZL5 1548 aa20.72■□□□□ 0.91
UBR4-211ENST00000467272 FANCAO15360 1455 aa20.7■□□□□ 0.9
UBR4-211ENST00000467272 PLEKHD1A6NEE1 506 aa20.7■□□□□ 0.9
UBR4-211ENST00000467272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
UBR4-211ENST00000467272 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
UBR4-211ENST00000467272 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
UBR4-211ENST00000467272 SIGLEC1Q9BZZ2 1709 aa20.67■□□□□ 0.9
UBR4-211ENST00000467272 EFCAB5A4FU69 1503 aa20.67■□□□□ 0.9
UBR4-211ENST00000467272 MAGI2Q86UL8 1455 aa20.66■□□□□ 0.9
UBR4-211ENST00000467272 CFAP74Q9C0B2 1584 aa20.65■□□□□ 0.9
UBR4-211ENST00000467272 YEATS2Q9ULM3 1422 aa20.65■□□□□ 0.9
UBR4-211ENST00000467272 ARID4BQ4LE39 1312 aaPredicted RBP20.65■□□□□ 0.9
UBR4-211ENST00000467272 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
UBR4-211ENST00000467272 ZFYVE16Q7Z3T8 1539 aa20.62■□□□□ 0.89
UBR4-211ENST00000467272 PLCH2O75038 1416 aa20.61■□□□□ 0.89
UBR4-211ENST00000467272 POGZQ7Z3K3 1410 aa20.6■□□□□ 0.89
UBR4-211ENST00000467272 HECW1Q76N89 1606 aa20.59■□□□□ 0.89
UBR4-211ENST00000467272 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.89
UBR4-211ENST00000467272 RANGAP1P46060 587 aaPredicted RBP20.57■□□□□ 0.88
UBR4-211ENST00000467272 SCAPERQ9BY12 1400 aa20.55■□□□□ 0.88
UBR4-211ENST00000467272 HSPA2P54652 639 aa20.55■□□□□ 0.88
UBR4-211ENST00000467272 ARHGEF12Q9NZN5 1544 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms