RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 PRG4Q92954 1404 aaPredicted RBP12.6□□□□□ -0.39
RPUSD3-212ENST00000466141 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
RPUSD3-212ENST00000466141 FAM69CQ0P6D2 419 aa12.59□□□□□ -0.39
RPUSD3-212ENST00000466141 FHAD1B1AJZ9 1412 aa12.59□□□□□ -0.39
RPUSD3-212ENST00000466141 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
RPUSD3-212ENST00000466141 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
RPUSD3-212ENST00000466141 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
RPUSD3-212ENST00000466141 KDM6BO15054 1643 aa12.53□□□□□ -0.4
RPUSD3-212ENST00000466141 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
RPUSD3-212ENST00000466141 MAPKBP1O60336 1514 aa12.52□□□□□ -0.4
RPUSD3-212ENST00000466141 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
RPUSD3-212ENST00000466141 ADCY10Q96PN6 1610 aa12.52□□□□□ -0.4
RPUSD3-212ENST00000466141 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
RPUSD3-212ENST00000466141 RUSC2Q8N2Y8 1516 aa12.51□□□□□ -0.41
RPUSD3-212ENST00000466141 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
RPUSD3-212ENST00000466141 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
RPUSD3-212ENST00000466141 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
RPUSD3-212ENST00000466141 ADGRL1O94910 1474 aa12.4□□□□□ -0.42
RPUSD3-212ENST00000466141 PPRC1Q5VV67 1664 aaKnown RBP12.37□□□□□ -0.43
RPUSD3-212ENST00000466141 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
RPUSD3-212ENST00000466141 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
RPUSD3-212ENST00000466141 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
RPUSD3-212ENST00000466141 PTPRGP23470 1445 aa12.34□□□□□ -0.43
RPUSD3-212ENST00000466141 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
RPUSD3-212ENST00000466141 ASXL2Q76L83 1435 aa12.33□□□□□ -0.44
RPUSD3-212ENST00000466141 ABCC2Q92887 1545 aa12.32□□□□□ -0.44
RPUSD3-212ENST00000466141 IGF1RP08069 1367 aa12.3□□□□□ -0.44
RPUSD3-212ENST00000466141 GLI2P10070 1586 aa12.3□□□□□ -0.44
RPUSD3-212ENST00000466141 PLPPR3Q6T4P5 718 aa12.3□□□□□ -0.44
RPUSD3-212ENST00000466141 CUL7Q14999 1698 aa12.29□□□□□ -0.44
RPUSD3-212ENST00000466141 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
RPUSD3-212ENST00000466141 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
RPUSD3-212ENST00000466141 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
RPUSD3-212ENST00000466141 FBXO41Q8TF61 875 aa12.27□□□□□ -0.45
RPUSD3-212ENST00000466141 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
RPUSD3-212ENST00000466141 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-212ENST00000466141 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
RPUSD3-212ENST00000466141 MAP3K4Q9Y6R4 1608 aa12.25□□□□□ -0.45
RPUSD3-212ENST00000466141 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
RPUSD3-212ENST00000466141 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
RPUSD3-212ENST00000466141 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
RPUSD3-212ENST00000466141 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
RPUSD3-212ENST00000466141 UACAQ9BZF9 1416 aa12.23□□□□□ -0.45
RPUSD3-212ENST00000466141 IQGAP2Q13576 1575 aa12.22□□□□□ -0.45
RPUSD3-212ENST00000466141 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
RPUSD3-212ENST00000466141 DISP1Q96F81 1524 aa12.21□□□□□ -0.46
RPUSD3-212ENST00000466141 TEX14Q8IWB6 1497 aa12.21□□□□□ -0.46
RPUSD3-212ENST00000466141 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
RPUSD3-212ENST00000466141 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
RPUSD3-212ENST00000466141 LMTK3Q96Q04 1460 aa12.19□□□□□ -0.46
RPUSD3-212ENST00000466141 APLP2Q06481 763 aa12.14□□□□□ -0.47
RPUSD3-212ENST00000466141 KIF21BO75037 1637 aa12.14□□□□□ -0.47
RPUSD3-212ENST00000466141 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
RPUSD3-212ENST00000466141 KIAA0556O60303 1618 aa12.12□□□□□ -0.47
RPUSD3-212ENST00000466141 UGGT2Q9NYU1 1516 aa12.11□□□□□ -0.47
RPUSD3-212ENST00000466141 CD109Q6YHK3 1445 aa12.1□□□□□ -0.47
RPUSD3-212ENST00000466141 SOCS7O14512 581 aa12.09□□□□□ -0.47
RPUSD3-212ENST00000466141 KCNH8Q96L42 1107 aa12.09□□□□□ -0.47
RPUSD3-212ENST00000466141 MAGI3Q5TCQ9 1506 aa12.09□□□□□ -0.47
RPUSD3-212ENST00000466141 CFAP43Q8NDM7 1665 aa12.08□□□□□ -0.48
RPUSD3-212ENST00000466141 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
RPUSD3-212ENST00000466141 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
RPUSD3-212ENST00000466141 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
RPUSD3-212ENST00000466141 PTPRMP28827 1452 aa12.04□□□□□ -0.48
RPUSD3-212ENST00000466141 ABCA8O94911 1581 aa12.03□□□□□ -0.48
RPUSD3-212ENST00000466141 ARID3CA6NKF2 412 aa12.02□□□□□ -0.49
RPUSD3-212ENST00000466141 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
RPUSD3-212ENST00000466141 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.49
RPUSD3-212ENST00000466141 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
RPUSD3-212ENST00000466141 PCF11O94913 1555 aaKnown RBP11.99□□□□□ -0.49
RPUSD3-212ENST00000466141 CTTNBP2Q8WZ74 1663 aa11.98□□□□□ -0.49
RPUSD3-212ENST00000466141 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
RPUSD3-212ENST00000466141 RAPGEF3O95398 923 aa11.98□□□□□ -0.49
RPUSD3-212ENST00000466141 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
RPUSD3-212ENST00000466141 BCORL1Q5H9F3 1711 aa11.96□□□□□ -0.49
RPUSD3-212ENST00000466141 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
RPUSD3-212ENST00000466141 DISP3Q9P2K9 1392 aa11.95□□□□□ -0.5
RPUSD3-212ENST00000466141 KCNA4P22459 653 aa11.95□□□□□ -0.5
RPUSD3-212ENST00000466141 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
RPUSD3-212ENST00000466141 FRMPD1Q5SYB0 1578 aa11.94□□□□□ -0.5
RPUSD3-212ENST00000466141 HSPA2P54652 639 aa11.94□□□□□ -0.5
RPUSD3-212ENST00000466141 ABCA9Q8IUA7 1624 aa11.93□□□□□ -0.5
RPUSD3-212ENST00000466141 ATP10BO94823 1461 aa11.93□□□□□ -0.5
RPUSD3-212ENST00000466141 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
RPUSD3-212ENST00000466141 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
RPUSD3-212ENST00000466141 PHLDB1Q86UU1 1377 aa11.89□□□□□ -0.51
RPUSD3-212ENST00000466141 NEO1Q92859 1461 aa11.89□□□□□ -0.51
RPUSD3-212ENST00000466141 ARHGEF40Q8TER5 1519 aa11.88□□□□□ -0.51
RPUSD3-212ENST00000466141 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
RPUSD3-212ENST00000466141 PRXQ9BXM0 1461 aa11.86□□□□□ -0.51
RPUSD3-212ENST00000466141 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
RPUSD3-212ENST00000466141 EEA1Q15075 1411 aa11.85□□□□□ -0.51
RPUSD3-212ENST00000466141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-212ENST00000466141 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
RPUSD3-212ENST00000466141 RICTORQ6R327 1708 aa11.83□□□□□ -0.52
RPUSD3-212ENST00000466141 SPATA31D1Q6ZQQ2 1576 aa11.83□□□□□ -0.52
RPUSD3-212ENST00000466141 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
RPUSD3-212ENST00000466141 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
RPUSD3-212ENST00000466141 YEATS2Q9ULM3 1422 aa11.81□□□□□ -0.52
RPUSD3-212ENST00000466141 MLECQ14165 292 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms