RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 ERCC6L2Q5T890 1561 aa43.71■■■■■ 4.59
SMC4-206ENST00000465903 RAPGEF2Q9Y4G8 1499 aa43.67■■■■■ 4.58
SMC4-206ENST00000465903 JPH4Q96JJ6 628 aa43.66■■■■■ 4.58
SMC4-206ENST00000465903 KIAA0586Q9BVV6 1533 aa43.66■■■■■ 4.58
SMC4-206ENST00000465903 PRG4Q92954 1404 aaPredicted RBP43.56■■■■■ 4.56
SMC4-206ENST00000465903 PRXQ9BXM0 1461 aa43.53■■■■■ 4.56
SMC4-206ENST00000465903 CSRNP3Q8WYN3 585 aa43.48■■■■■ 4.55
SMC4-206ENST00000465903 EEA1Q15075 1411 aa43.46■■■■■ 4.55
SMC4-206ENST00000465903 IQGAP2Q13576 1575 aa43.41■■■■■ 4.54
SMC4-206ENST00000465903 FAM9AQ8IZU1 332 aaPredicted RBP43.33■■■■■ 4.53
SMC4-206ENST00000465903 CTTNBP2Q8WZ74 1663 aa43.31■■■■■ 4.52
SMC4-206ENST00000465903 UGGT2Q9NYU1 1516 aa43.19■■■■■ 4.5
SMC4-206ENST00000465903 DISP1Q96F81 1524 aa43.15■■■■■ 4.5
SMC4-206ENST00000465903 CARMIL2Q6F5E8 1435 aa43.14■■■■■ 4.5
SMC4-206ENST00000465903 KIF21BO75037 1637 aa43.07■■■■■ 4.48
SMC4-206ENST00000465903 TNIKQ9UKE5 1360 aa43.05■■■■■ 4.48
SMC4-206ENST00000465903 PTPRGP23470 1445 aa43.02■■■■■ 4.48
SMC4-206ENST00000465903 KIAA0556O60303 1618 aa43.01■■■■■ 4.48
SMC4-206ENST00000465903 ADCY10Q96PN6 1610 aa42.94■■■■■ 4.46
SMC4-206ENST00000465903 TTBK1Q5TCY1 1321 aaPredicted RBP42.94■■■■■ 4.46
SMC4-206ENST00000465903 GOLGA3Q08378 1498 aa42.88■■■■■ 4.46
SMC4-206ENST00000465903 TRHP20396 242 aaPredicted RBP42.85■■■■■ 4.45
SMC4-206ENST00000465903 EHMT2Q96KQ7 1210 aa42.76■■■■■ 4.44
SMC4-206ENST00000465903 UACAQ9BZF9 1416 aa42.74■■■■■ 4.43
SMC4-206ENST00000465903 SAMD9Q5K651 1589 aa42.73■■■■■ 4.43
SMC4-206ENST00000465903 NPM1P06748 294 aaKnown RBP eCLIP42.72■■■■■ 4.43
SMC4-206ENST00000465903 UHRF1BP1LA0JNW5 1464 aa42.72■■■■■ 4.43
SMC4-206ENST00000465903 P3H3Q8IVL6 736 aa42.68■■■■■ 4.42
SMC4-206ENST00000465903 ABCC2Q92887 1545 aa42.67■■■■■ 4.42
SMC4-206ENST00000465903 UBTFP17480 764 aaKnown RBP42.67■■■■■ 4.42
SMC4-206ENST00000465903 MAPKBP1O60336 1514 aa42.63■■■■■ 4.42
SMC4-206ENST00000465903 RANGAP1P46060 587 aaPredicted RBP42.62■■■■■ 4.41
SMC4-206ENST00000465903 PLB1Q6P1J6 1458 aa42.6■■■■■ 4.41
SMC4-206ENST00000465903 ABCA8O94911 1581 aa42.57■■■■■ 4.41
SMC4-206ENST00000465903 KIF13AQ9H1H9 1805 aa42.56■■■■■ 4.4
SMC4-206ENST00000465903 KDM5BQ9UGL1 1544 aa42.53■■■■■ 4.4
SMC4-206ENST00000465903 EFCAB5A4FU69 1503 aa42.47■■■■■ 4.39
SMC4-206ENST00000465903 ABCC10Q5T3U5 1492 aa42.46■■■■■ 4.39
SMC4-206ENST00000465903 ZCCHC11Q5TAX3 1644 aaKnown RBP42.46■■■■■ 4.39
SMC4-206ENST00000465903 FHOD3Q2V2M9 1422 aa42.46■■■■■ 4.39
SMC4-206ENST00000465903 DIP2BQ9P265 1576 aa42.4■■■■■ 4.38
SMC4-206ENST00000465903 ASXL2Q76L83 1435 aa42.38■■■■■ 4.38
SMC4-206ENST00000465903 FAM69CQ0P6D2 419 aa42.35■■■■■ 4.37
SMC4-206ENST00000465903 RAPGEF6Q8TEU7 1601 aa42.32■■■■■ 4.37
SMC4-206ENST00000465903 ARHGAP35Q9NRY4 1499 aa42.32■■■■■ 4.37
SMC4-206ENST00000465903 ATP10BO94823 1461 aa42.23■■■■■ 4.35
SMC4-206ENST00000465903 ARID3CA6NKF2 412 aa42.19■■■■■ 4.34
SMC4-206ENST00000465903 GLI2P10070 1586 aa42.17■■■■■ 4.34
SMC4-206ENST00000465903 NUP153P49790 1475 aaKnown RBP42.17■■■■■ 4.34
SMC4-206ENST00000465903 EPRSP07814 1512 aaKnown RBP42.15■■■■■ 4.34
SMC4-206ENST00000465903 WDR7Q9Y4E6 1490 aa42.15■■■■■ 4.34
SMC4-206ENST00000465903 TSPOAP1O95153 1857 aa42.13■■■■■ 4.34
SMC4-206ENST00000465903 FMN1Q68DA7 1419 aa42.07■■■■■ 4.33
SMC4-206ENST00000465903 CLIP1P30622 1438 aa42■■■■■ 4.31
SMC4-206ENST00000465903 MAP3K4Q9Y6R4 1608 aa41.99■■■■■ 4.31
SMC4-206ENST00000465903 KCNH8Q96L42 1107 aa41.99■■■■■ 4.31
SMC4-206ENST00000465903 PPRC1Q5VV67 1664 aaKnown RBP41.99■■■■■ 4.31
SMC4-206ENST00000465903 LOC105371045A0A1W2PR82 267 aa41.98■■■■■ 4.31
SMC4-206ENST00000465903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.96■■■■■ 4.31
SMC4-206ENST00000465903 HNRNPUL2Q1KMD3 747 aaKnown RBP41.96■■■■■ 4.31
SMC4-206ENST00000465903 HECW1Q76N89 1606 aa41.89■■■■■ 4.3
SMC4-206ENST00000465903 CDK13Q14004 1512 aaKnown RBP41.87■■■■■ 4.29
SMC4-206ENST00000465903 CFAP43Q8NDM7 1665 aa41.86■■■■■ 4.29
SMC4-206ENST00000465903 ATP1B4Q9UN42 357 aaPredicted RBP41.85■■■■■ 4.29
SMC4-206ENST00000465903 LRRIQ1Q96JM4 1722 aa41.83■■■■■ 4.29
SMC4-206ENST00000465903 CEP162Q5TB80 1403 aa41.81■■■■■ 4.28
SMC4-206ENST00000465903 PLEKHD1A6NEE1 506 aa41.8■■■■■ 4.28
SMC4-206ENST00000465903 PCF11O94913 1555 aaKnown RBP41.79■■■■■ 4.28
SMC4-206ENST00000465903 CASKIN1Q8WXD9 1431 aa41.78■■■■■ 4.28
SMC4-206ENST00000465903 CD109Q6YHK3 1445 aa41.78■■■■■ 4.28
SMC4-206ENST00000465903 ABCA9Q8IUA7 1624 aa41.76■■■■■ 4.28
SMC4-206ENST00000465903 MAGI3Q5TCQ9 1506 aa41.71■■■■■ 4.27
SMC4-206ENST00000465903 TEX14Q8IWB6 1497 aa41.71■■■■■ 4.27
SMC4-206ENST00000465903 KDM6BO15054 1643 aa41.7■■■■■ 4.27
SMC4-206ENST00000465903 FYCO1Q9BQS8 1478 aa41.65■■■■■ 4.26
SMC4-206ENST00000465903 CCDC18Q5T9S5 1454 aa41.58■■■■■ 4.25
SMC4-206ENST00000465903 COL17A1Q9UMD9 1497 aaPredicted RBP41.58■■■■■ 4.25
SMC4-206ENST00000465903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.58■■■■■ 4.254e-7■■□□□ 12.8
SMC4-206ENST00000465903 CDK11AQ9UQ88 783 aaPredicted RBP41.57■■■■■ 4.25
SMC4-206ENST00000465903 TTC37Q6PGP7 1564 aa41.51■■■■■ 4.24
SMC4-206ENST00000465903 TROQ12816 1431 aaPredicted RBP41.51■■■■■ 4.24
SMC4-206ENST00000465903 KIF14Q15058 1648 aa41.46■■■■■ 4.23
SMC4-206ENST00000465903 NEO1Q92859 1461 aa41.37■■■■■ 4.21
SMC4-206ENST00000465903 ARAP3Q8WWN8 1544 aa41.36■■■■■ 4.21
SMC4-206ENST00000465903 PHLDB1Q86UU1 1377 aa41.36■■■■■ 4.21
SMC4-206ENST00000465903 PLCH2O75038 1416 aa41.32■■■■■ 4.21
SMC4-206ENST00000465903 VPS8Q8N3P4 1428 aa41.32■■■■■ 4.21
SMC4-206ENST00000465903 MYO5CQ9NQX4 1742 aa41.31■■■■■ 4.2
SMC4-206ENST00000465903 FANCAO15360 1455 aa41.28■■■■■ 4.2
SMC4-206ENST00000465903 CFAP74Q9C0B2 1584 aa41.25■■■■■ 4.19
SMC4-206ENST00000465903 AKNAQ7Z591 1439 aa41.24■■■■■ 4.19
SMC4-206ENST00000465903 CDC42BPBQ9Y5S2 1711 aa41.19■■■■■ 4.18
SMC4-206ENST00000465903 RAPGEF3O95398 923 aa41.15■■■■■ 4.18
SMC4-206ENST00000465903 MTUS2Q5JR59 1369 aa41.13■■■■■ 4.18
SMC4-206ENST00000465903 CDC42BPAQ5VT25 1732 aa41.13■■■■■ 4.18
SMC4-206ENST00000465903 EFCAB2Q5VUJ9 269 aa41.13■■■■■ 4.17
SMC4-206ENST00000465903 FRMPD1Q5SYB0 1578 aa41.12■■■■■ 4.17
SMC4-206ENST00000465903 TIAM1Q13009 1591 aa41.11■■■■■ 4.17
SMC4-206ENST00000465903 PREX2Q70Z35 1606 aa41.11■■■■■ 4.17
SMC4-206ENST00000465903 RICTORQ6R327 1708 aa41.1■■■■■ 4.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms