RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 KIAA0586Q9BVV6 1533 aa20.06■□□□□ 0.8
RPUSD3-211ENST00000464783 FAM9AQ8IZU1 332 aaPredicted RBP20.05■□□□□ 0.8
RPUSD3-211ENST00000464783 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
RPUSD3-211ENST00000464783 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
RPUSD3-211ENST00000464783 CTTNBP2Q8WZ74 1663 aa20.03■□□□□ 0.8
RPUSD3-211ENST00000464783 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
RPUSD3-211ENST00000464783 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
RPUSD3-211ENST00000464783 ERCC6L2Q5T890 1561 aa20.02■□□□□ 0.8
RPUSD3-211ENST00000464783 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
RPUSD3-211ENST00000464783 JPH4Q96JJ6 628 aa20.01■□□□□ 0.79
RPUSD3-211ENST00000464783 PRG4Q92954 1404 aaPredicted RBP20.01■□□□□ 0.79
RPUSD3-211ENST00000464783 KIF21BO75037 1637 aa19.93■□□□□ 0.78
RPUSD3-211ENST00000464783 CARMIL2Q6F5E8 1435 aa19.88■□□□□ 0.77
RPUSD3-211ENST00000464783 UGGT2Q9NYU1 1516 aa19.86■□□□□ 0.77
RPUSD3-211ENST00000464783 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
RPUSD3-211ENST00000464783 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
RPUSD3-211ENST00000464783 DISP1Q96F81 1524 aa19.81■□□□□ 0.76
RPUSD3-211ENST00000464783 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
RPUSD3-211ENST00000464783 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
RPUSD3-211ENST00000464783 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
RPUSD3-211ENST00000464783 PTPRGP23470 1445 aa19.76■□□□□ 0.75
RPUSD3-211ENST00000464783 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
RPUSD3-211ENST00000464783 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
RPUSD3-211ENST00000464783 ADCY10Q96PN6 1610 aa19.72■□□□□ 0.75
RPUSD3-211ENST00000464783 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
RPUSD3-211ENST00000464783 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
RPUSD3-211ENST00000464783 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
RPUSD3-211ENST00000464783 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
RPUSD3-211ENST00000464783 UACAQ9BZF9 1416 aa19.63■□□□□ 0.73
RPUSD3-211ENST00000464783 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-211ENST00000464783 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
RPUSD3-211ENST00000464783 UHRF1BP1LA0JNW5 1464 aa19.6■□□□□ 0.73
RPUSD3-211ENST00000464783 PLB1Q6P1J6 1458 aa19.58■□□□□ 0.72
RPUSD3-211ENST00000464783 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
RPUSD3-211ENST00000464783 ABCA8O94911 1581 aa19.57■□□□□ 0.72
RPUSD3-211ENST00000464783 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
RPUSD3-211ENST00000464783 ZCCHC11Q5TAX3 1644 aaKnown RBP19.54■□□□□ 0.72
RPUSD3-211ENST00000464783 RAPGEF6Q8TEU7 1601 aa19.53■□□□□ 0.72
RPUSD3-211ENST00000464783 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
RPUSD3-211ENST00000464783 KDM5BQ9UGL1 1544 aa19.51■□□□□ 0.71
RPUSD3-211ENST00000464783 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
RPUSD3-211ENST00000464783 DIP2BQ9P265 1576 aa19.45■□□□□ 0.7
RPUSD3-211ENST00000464783 ASXL2Q76L83 1435 aa19.45■□□□□ 0.7
RPUSD3-211ENST00000464783 ABCC10Q5T3U5 1492 aa19.44■□□□□ 0.7
RPUSD3-211ENST00000464783 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
RPUSD3-211ENST00000464783 CLIP1P30622 1438 aa19.43■□□□□ 0.7
RPUSD3-211ENST00000464783 FMN1Q68DA7 1419 aa19.43■□□□□ 0.7
RPUSD3-211ENST00000464783 FAM69CQ0P6D2 419 aa19.41■□□□□ 0.7
RPUSD3-211ENST00000464783 LOC105371045A0A1W2PR82 267 aa19.4■□□□□ 0.7
RPUSD3-211ENST00000464783 NUP153P49790 1475 aaKnown RBP19.4■□□□□ 0.7
RPUSD3-211ENST00000464783 HECW1Q76N89 1606 aa19.4■□□□□ 0.7
RPUSD3-211ENST00000464783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-211ENST00000464783 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-211ENST00000464783 ATP10BO94823 1461 aa19.38■□□□□ 0.69
RPUSD3-211ENST00000464783 TSPOAP1O95153 1857 aa19.38■□□□□ 0.69
RPUSD3-211ENST00000464783 WDR7Q9Y4E6 1490 aa19.38■□□□□ 0.69
RPUSD3-211ENST00000464783 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
RPUSD3-211ENST00000464783 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
RPUSD3-211ENST00000464783 EPRSP07814 1512 aaKnown RBP19.34■□□□□ 0.69
RPUSD3-211ENST00000464783 PCF11O94913 1555 aaKnown RBP19.33■□□□□ 0.69
RPUSD3-211ENST00000464783 GLI2P10070 1586 aa19.33■□□□□ 0.69
RPUSD3-211ENST00000464783 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
RPUSD3-211ENST00000464783 KCNH8Q96L42 1107 aa19.3■□□□□ 0.68
RPUSD3-211ENST00000464783 LRRIQ1Q96JM4 1722 aa19.29■□□□□ 0.68
RPUSD3-211ENST00000464783 MAP3K4Q9Y6R4 1608 aa19.29■□□□□ 0.68
RPUSD3-211ENST00000464783 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.68
RPUSD3-211ENST00000464783 CASKIN1Q8WXD9 1431 aa19.27■□□□□ 0.68
RPUSD3-211ENST00000464783 FYCO1Q9BQS8 1478 aa19.26■□□□□ 0.67
RPUSD3-211ENST00000464783 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
RPUSD3-211ENST00000464783 PPRC1Q5VV67 1664 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-211ENST00000464783 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
RPUSD3-211ENST00000464783 ABCA9Q8IUA7 1624 aa19.21■□□□□ 0.67
RPUSD3-211ENST00000464783 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
RPUSD3-211ENST00000464783 CD109Q6YHK3 1445 aa19.18■□□□□ 0.66
RPUSD3-211ENST00000464783 TEX14Q8IWB6 1497 aa19.18■□□□□ 0.66
RPUSD3-211ENST00000464783 KDM6BO15054 1643 aa19.16■□□□□ 0.66
RPUSD3-211ENST00000464783 KIF14Q15058 1648 aa19.14■□□□□ 0.66
RPUSD3-211ENST00000464783 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
RPUSD3-211ENST00000464783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.13■□□□□ 0.65
RPUSD3-211ENST00000464783 TTC37Q6PGP7 1564 aa19.12■□□□□ 0.65
RPUSD3-211ENST00000464783 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
RPUSD3-211ENST00000464783 VPS8Q8N3P4 1428 aa19.12■□□□□ 0.65
RPUSD3-211ENST00000464783 MYO5CQ9NQX4 1742 aa19.09■□□□□ 0.65
RPUSD3-211ENST00000464783 CFAP74Q9C0B2 1584 aa19.06■□□□□ 0.64
RPUSD3-211ENST00000464783 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
RPUSD3-211ENST00000464783 TIAM1Q13009 1591 aa19.02■□□□□ 0.64
RPUSD3-211ENST00000464783 NEO1Q92859 1461 aa19.02■□□□□ 0.63
RPUSD3-211ENST00000464783 EHBP1L1Q8N3D4 1523 aa19.01■□□□□ 0.63
RPUSD3-211ENST00000464783 FANCAO15360 1455 aa19.01■□□□□ 0.63
RPUSD3-211ENST00000464783 PHLDB1Q86UU1 1377 aa18.98■□□□□ 0.63
RPUSD3-211ENST00000464783 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
RPUSD3-211ENST00000464783 PREX2Q70Z35 1606 aa18.98■□□□□ 0.63
RPUSD3-211ENST00000464783 ARHGAP5Q13017 1502 aa18.98■□□□□ 0.63
RPUSD3-211ENST00000464783 PLCH2O75038 1416 aa18.98■□□□□ 0.63
RPUSD3-211ENST00000464783 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
RPUSD3-211ENST00000464783 CDC42BPBQ9Y5S2 1711 aa18.97■□□□□ 0.63
RPUSD3-211ENST00000464783 ARAP3Q8WWN8 1544 aa18.96■□□□□ 0.63
RPUSD3-211ENST00000464783 SUPT6HQ7KZ85 1726 aaKnown RBP18.96■□□□□ 0.63
RPUSD3-211ENST00000464783 APLP2Q06481 763 aa18.95■□□□□ 0.62
RPUSD3-211ENST00000464783 AKNAQ7Z591 1439 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms