RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
GYPC-205ENST00000464053 FBLN2P98095 1184 aa24.51■■□□□ 1.51
GYPC-205ENST00000464053 ARHGAP35Q9NRY4 1499 aa24.48■■□□□ 1.51
GYPC-205ENST00000464053 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
GYPC-205ENST00000464053 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
GYPC-205ENST00000464053 CHD1O14646 1710 aa24.42■■□□□ 1.5
GYPC-205ENST00000464053 IQGAP2Q13576 1575 aa24.41■■□□□ 1.5
GYPC-205ENST00000464053 KIAA0586Q9BVV6 1533 aa24.39■■□□□ 1.49
GYPC-205ENST00000464053 NUP160Q12769 1436 aa24.38■■□□□ 1.49
GYPC-205ENST00000464053 VPS8Q8N3P4 1428 aa24.37■■□□□ 1.49
GYPC-205ENST00000464053 P3H3Q8IVL6 736 aa24.36■■□□□ 1.49
GYPC-205ENST00000464053 EFCAB5A4FU69 1503 aa24.35■■□□□ 1.49
GYPC-205ENST00000464053 SAMD9Q5K651 1589 aa24.34■■□□□ 1.49
GYPC-205ENST00000464053 FHOD3Q2V2M9 1422 aa24.3■■□□□ 1.48
GYPC-205ENST00000464053 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
GYPC-205ENST00000464053 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
GYPC-205ENST00000464053 DISP1Q96F81 1524 aa24.21■■□□□ 1.47
GYPC-205ENST00000464053 JPH4Q96JJ6 628 aa24.2■■□□□ 1.46
GYPC-205ENST00000464053 KIAA0556O60303 1618 aa24.18■■□□□ 1.46
GYPC-205ENST00000464053 PCF11O94913 1555 aaKnown RBP24.14■■□□□ 1.45
GYPC-205ENST00000464053 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
GYPC-205ENST00000464053 CLASP1Q7Z460 1538 aa24.12■■□□□ 1.45
GYPC-205ENST00000464053 SHROOM2Q13796 1616 aa24.09■■□□□ 1.45
GYPC-205ENST00000464053 APLP2Q06481 763 aa24.08■■□□□ 1.45
GYPC-205ENST00000464053 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.45
GYPC-205ENST00000464053 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
GYPC-205ENST00000464053 CARMIL2Q6F5E8 1435 aa24.07■■□□□ 1.44
GYPC-205ENST00000464053 PRG4Q92954 1404 aaPredicted RBP24.07■■□□□ 1.44
GYPC-205ENST00000464053 FYCO1Q9BQS8 1478 aa24.05■■□□□ 1.44
GYPC-205ENST00000464053 ATP1B4Q9UN42 357 aaPredicted RBP24.04■■□□□ 1.44
GYPC-205ENST00000464053 ERCC6L2Q5T890 1561 aa24■■□□□ 1.43
GYPC-205ENST00000464053 KANK4Q5T7N3 995 aaPredicted RBP23.99■■□□□ 1.43
GYPC-205ENST00000464053 LRRIQ1Q96JM4 1722 aa23.99■■□□□ 1.43
GYPC-205ENST00000464053 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
GYPC-205ENST00000464053 OSCARQ8IYS5 282 aa23.98■■□□□ 1.43
GYPC-205ENST00000464053 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
GYPC-205ENST00000464053 CFAP43Q8NDM7 1665 aa23.95■■□□□ 1.42
GYPC-205ENST00000464053 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
GYPC-205ENST00000464053 HECW1Q76N89 1606 aa23.92■■□□□ 1.42
GYPC-205ENST00000464053 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
GYPC-205ENST00000464053 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
GYPC-205ENST00000464053 PLB1Q6P1J6 1458 aa23.9■■□□□ 1.42
GYPC-205ENST00000464053 PTPRGP23470 1445 aa23.88■■□□□ 1.41
GYPC-205ENST00000464053 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
GYPC-205ENST00000464053 EPRSP07814 1512 aaKnown RBP23.86■■□□□ 1.41
GYPC-205ENST00000464053 NUP153P49790 1475 aaKnown RBP23.86■■□□□ 1.41
GYPC-205ENST00000464053 ARID3CA6NKF2 412 aa23.85■■□□□ 1.41
GYPC-205ENST00000464053 ABCA8O94911 1581 aa23.85■■□□□ 1.41
GYPC-205ENST00000464053 CCDC18Q5T9S5 1454 aa23.84■■□□□ 1.41
GYPC-205ENST00000464053 CDK13Q14004 1512 aaKnown RBP23.83■■□□□ 1.41
GYPC-205ENST00000464053 MAGI3Q5TCQ9 1506 aa23.77■■□□□ 1.4
GYPC-205ENST00000464053 UACAQ9BZF9 1416 aa23.74■■□□□ 1.39
GYPC-205ENST00000464053 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
GYPC-205ENST00000464053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.7■■□□□ 1.39
GYPC-205ENST00000464053 HNRNPUL2Q1KMD3 747 aaKnown RBP23.7■■□□□ 1.39
GYPC-205ENST00000464053 EHBP1L1Q8N3D4 1523 aa23.7■■□□□ 1.38
GYPC-205ENST00000464053 ATP10BO94823 1461 aa23.69■■□□□ 1.38
GYPC-205ENST00000464053 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
GYPC-205ENST00000464053 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
GYPC-205ENST00000464053 SUPT6HQ7KZ85 1726 aaKnown RBP23.65■■□□□ 1.38
GYPC-205ENST00000464053 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
GYPC-205ENST00000464053 UHRF1BP1LA0JNW5 1464 aa23.62■■□□□ 1.37
GYPC-205ENST00000464053 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
GYPC-205ENST00000464053 RRBP1Q9P2E9 1410 aaKnown RBP23.6■■□□□ 1.37
GYPC-205ENST00000464053 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
GYPC-205ENST00000464053 ADCY10Q96PN6 1610 aa23.58■■□□□ 1.37
GYPC-205ENST00000464053 TROQ12816 1431 aaPredicted RBP23.58■■□□□ 1.37
GYPC-205ENST00000464053 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
GYPC-205ENST00000464053 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
GYPC-205ENST00000464053 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
GYPC-205ENST00000464053 PLEKHD1A6NEE1 506 aa23.54■■□□□ 1.36
GYPC-205ENST00000464053 KIF14Q15058 1648 aa23.52■■□□□ 1.36
GYPC-205ENST00000464053 RIMBP3CA6NJZ7 1639 aa23.52■■□□□ 1.36
GYPC-205ENST00000464053 RIMBP3BA6NNM3 1639 aa23.52■■□□□ 1.36
GYPC-205ENST00000464053 RIMBP3Q9UFD9 1639 aa23.52■■□□□ 1.36
GYPC-205ENST00000464053 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
GYPC-205ENST00000464053 FGD6Q6ZV73 1430 aa23.48■■□□□ 1.35
GYPC-205ENST00000464053 FAM50AQ14320 339 aaKnown RBP23.43■■□□□ 1.34
GYPC-205ENST00000464053 ABCC10Q5T3U5 1492 aa23.41■■□□□ 1.34
GYPC-205ENST00000464053 PTPN23Q9H3S7 1636 aa23.4■■□□□ 1.34
GYPC-205ENST00000464053 CYB5RLQ6IPT4 315 aa23.39■■□□□ 1.33
GYPC-205ENST00000464053 GPATCH8Q9UKJ3 1502 aaKnown RBP23.38■■□□□ 1.33
GYPC-205ENST00000464053 ITGAEP38570 1179 aa23.38■■□□□ 1.33
GYPC-205ENST00000464053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.37■■□□□ 1.332e-7■■□□□ 13.2
GYPC-205ENST00000464053 MIA2Q96PC5 1412 aa23.37■■□□□ 1.33
GYPC-205ENST00000464053 CDC42BPAQ5VT25 1732 aa23.36■■□□□ 1.33
GYPC-205ENST00000464053 KCNH8Q96L42 1107 aa23.36■■□□□ 1.33
GYPC-205ENST00000464053 ITSN2Q9NZM3 1697 aa23.35■■□□□ 1.33
GYPC-205ENST00000464053 TCOF1Q13428 1488 aaKnown RBP23.35■■□□□ 1.33
GYPC-205ENST00000464053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.334e-6■■■□□ 16.3
GYPC-205ENST00000464053 TTC37Q6PGP7 1564 aa23.33■■□□□ 1.33
GYPC-205ENST00000464053 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
GYPC-205ENST00000464053 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
GYPC-205ENST00000464053 ASXL2Q76L83 1435 aa23.32■■□□□ 1.32
GYPC-205ENST00000464053 ZNF644Q9H582 1327 aaPredicted RBP23.3■■□□□ 1.32
GYPC-205ENST00000464053 CFDP1Q9UEE9 299 aaPredicted RBP23.3■■□□□ 1.32
GYPC-205ENST00000464053 CDC42BPBQ9Y5S2 1711 aa23.27■■□□□ 1.32
GYPC-205ENST00000464053 PREX2Q70Z35 1606 aa23.26■■□□□ 1.31
GYPC-205ENST00000464053 PTPRKQ15262 1439 aa23.25■■□□□ 1.31
GYPC-205ENST00000464053 ZNF777Q9ULD5 760 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms