RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 AEBP2Q6ZN18 517 aaPredicted RBP30.75■■■□□ 2.51
HMGN1-209ENST00000463631 CUL7Q14999 1698 aa30.66■■■□□ 2.5
HMGN1-209ENST00000463631 MAPKBP1O60336 1514 aa30.66■■■□□ 2.5
HMGN1-209ENST00000463631 KIAA0586Q9BVV6 1533 aa30.64■■■□□ 2.5
HMGN1-209ENST00000463631 ABCC10Q5T3U5 1492 aa30.62■■■□□ 2.49
HMGN1-209ENST00000463631 ADCY10Q96PN6 1610 aa30.62■■■□□ 2.49
HMGN1-209ENST00000463631 KIF27Q86VH2 1401 aa30.61■■■□□ 2.49
HMGN1-209ENST00000463631 IGF1RP08069 1367 aa30.6■■■□□ 2.49
HMGN1-209ENST00000463631 DIP2BQ9P265 1576 aa30.57■■■□□ 2.48
HMGN1-209ENST00000463631 NPM1P06748 294 aaKnown RBP eCLIP30.5■■■□□ 2.47
HMGN1-209ENST00000463631 FAM69CQ0P6D2 419 aa30.47■■■□□ 2.47
HMGN1-209ENST00000463631 CARMIL1Q5VZK9 1371 aa30.38■■■□□ 2.45
HMGN1-209ENST00000463631 PTPRGP23470 1445 aa30.34■■■□□ 2.45
HMGN1-209ENST00000463631 IQGAP2Q13576 1575 aa30.33■■■□□ 2.45
HMGN1-209ENST00000463631 KDM6BO15054 1643 aa30.33■■■□□ 2.45
HMGN1-209ENST00000463631 CARMIL2Q6F5E8 1435 aa30.31■■■□□ 2.44
HMGN1-209ENST00000463631 ABCC2Q92887 1545 aa30.29■■■□□ 2.44
HMGN1-209ENST00000463631 TNIKQ9UKE5 1360 aa30.28■■■□□ 2.44
HMGN1-209ENST00000463631 TSPOAP1O95153 1857 aa30.25■■■□□ 2.43
HMGN1-209ENST00000463631 UHRF1BP1LA0JNW5 1464 aa30.23■■■□□ 2.43
HMGN1-209ENST00000463631 DISP1Q96F81 1524 aa30.19■■■□□ 2.42
HMGN1-209ENST00000463631 GLI2P10070 1586 aa30.19■■■□□ 2.42
HMGN1-209ENST00000463631 PLB1Q6P1J6 1458 aa30.19■■■□□ 2.42
HMGN1-209ENST00000463631 ASXL2Q76L83 1435 aa30.16■■■□□ 2.42
HMGN1-209ENST00000463631 UGGT2Q9NYU1 1516 aa30.14■■■□□ 2.42
HMGN1-209ENST00000463631 PPRC1Q5VV67 1664 aaKnown RBP30.14■■■□□ 2.41
HMGN1-209ENST00000463631 UACAQ9BZF9 1416 aa30.13■■■□□ 2.41
HMGN1-209ENST00000463631 RAPGEF2Q9Y4G8 1499 aa30.12■■■□□ 2.41
HMGN1-209ENST00000463631 KDM5BQ9UGL1 1544 aa30.08■■■□□ 2.41
HMGN1-209ENST00000463631 TTBK1Q5TCY1 1321 aaPredicted RBP30.08■■■□□ 2.41
HMGN1-209ENST00000463631 KIAA0556O60303 1618 aa30.07■■■□□ 2.4
HMGN1-209ENST00000463631 KDM4FA0A1W2PPD8 638 aa30.04■■■□□ 2.4
HMGN1-209ENST00000463631 MAP3K4Q9Y6R4 1608 aa30.01■■■□□ 2.39
HMGN1-209ENST00000463631 EPRSP07814 1512 aaKnown RBP30.01■■■□□ 2.39
HMGN1-209ENST00000463631 ZCCHC11Q5TAX3 1644 aaKnown RBP30■■■□□ 2.39
HMGN1-209ENST00000463631 CTTNBP2Q8WZ74 1663 aa29.95■■■□□ 2.39
HMGN1-209ENST00000463631 TEX14Q8IWB6 1497 aa29.92■■■□□ 2.38
HMGN1-209ENST00000463631 COL17A1Q9UMD9 1497 aaPredicted RBP29.88■■■□□ 2.37
HMGN1-209ENST00000463631 WDR7Q9Y4E6 1490 aa29.87■■■□□ 2.37
HMGN1-209ENST00000463631 GOLGA3Q08378 1498 aa29.85■■■□□ 2.37
HMGN1-209ENST00000463631 ADGRL1O94910 1474 aa29.82■■■□□ 2.36
HMGN1-209ENST00000463631 ABCA8O94911 1581 aa29.8■■■□□ 2.36
HMGN1-209ENST00000463631 PRXQ9BXM0 1461 aa29.78■■■□□ 2.36
HMGN1-209ENST00000463631 CFAP43Q8NDM7 1665 aa29.76■■■□□ 2.35
HMGN1-209ENST00000463631 MAGI3Q5TCQ9 1506 aa29.72■■■□□ 2.35
HMGN1-209ENST00000463631 CD109Q6YHK3 1445 aa29.65■■■□□ 2.34
HMGN1-209ENST00000463631 SAMD9Q5K651 1589 aa29.52■■■□□ 2.32
HMGN1-209ENST00000463631 KCNH8Q96L42 1107 aa29.52■■■□□ 2.32
HMGN1-209ENST00000463631 HECW2Q9P2P5 1572 aa29.51■■■□□ 2.31
HMGN1-209ENST00000463631 ARAP3Q8WWN8 1544 aa29.5■■■□□ 2.31
HMGN1-209ENST00000463631 ATP10BO94823 1461 aa29.48■■■□□ 2.31
HMGN1-209ENST00000463631 ABCA9Q8IUA7 1624 aa29.48■■■□□ 2.31
HMGN1-209ENST00000463631 FAM9AQ8IZU1 332 aaPredicted RBP29.44■■■□□ 2.3
HMGN1-209ENST00000463631 KIF21BO75037 1637 aa29.43■■■□□ 2.3
HMGN1-209ENST00000463631 RAPGEF6Q8TEU7 1601 aa29.42■■■□□ 2.3
HMGN1-209ENST00000463631 PHLDB1Q86UU1 1377 aa29.4■■■□□ 2.3
HMGN1-209ENST00000463631 CSRNP3Q8WYN3 585 aa29.36■■■□□ 2.29
HMGN1-209ENST00000463631 ILDR1Q86SU0 546 aaPredicted RBP29.35■■■□□ 2.29
HMGN1-209ENST00000463631 P3H3Q8IVL6 736 aa29.35■■■□□ 2.29
HMGN1-209ENST00000463631 NEO1Q92859 1461 aa29.34■■■□□ 2.29
HMGN1-209ENST00000463631 ARID3CA6NKF2 412 aa29.33■■■□□ 2.29
HMGN1-209ENST00000463631 EEA1Q15075 1411 aa29.32■■■□□ 2.28
HMGN1-209ENST00000463631 NUP153P49790 1475 aaKnown RBP29.31■■■□□ 2.28
HMGN1-209ENST00000463631 ADAMTSL3P82987 1691 aa29.25■■■□□ 2.27
HMGN1-209ENST00000463631 FRMPD1Q5SYB0 1578 aa29.25■■■□□ 2.27
HMGN1-209ENST00000463631 FHOD3Q2V2M9 1422 aa29.2■■■□□ 2.26
HMGN1-209ENST00000463631 EFCAB5A4FU69 1503 aa29.18■■■□□ 2.26
HMGN1-209ENST00000463631 PTPRMP28827 1452 aa29.17■■■□□ 2.26
HMGN1-209ENST00000463631 RAPGEF3O95398 923 aa29.16■■■□□ 2.26
HMGN1-209ENST00000463631 BCORL1Q5H9F3 1711 aa29.15■■■□□ 2.26
HMGN1-209ENST00000463631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
HMGN1-209ENST00000463631 HNRNPUL2Q1KMD3 747 aaKnown RBP29.14■■■□□ 2.26
HMGN1-209ENST00000463631 ARHGEF40Q8TER5 1519 aa29.14■■■□□ 2.25
HMGN1-209ENST00000463631 CFAP74Q9C0B2 1584 aa29.13■■■□□ 2.25
HMGN1-209ENST00000463631 RICTORQ6R327 1708 aa29.11■■■□□ 2.25
HMGN1-209ENST00000463631 MADDQ8WXG6 1647 aa29.09■■■□□ 2.25
HMGN1-209ENST00000463631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.08■■■□□ 2.251e-6■■■■□ 20.1
HMGN1-209ENST00000463631 DENND4BO75064 1496 aaPredicted RBP29.07■■■□□ 2.24
HMGN1-209ENST00000463631 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
HMGN1-209ENST00000463631 FANCAO15360 1455 aa29.05■■■□□ 2.24
HMGN1-209ENST00000463631 PLEKHD1A6NEE1 506 aa29.05■■■□□ 2.24
HMGN1-209ENST00000463631 ZMYM4Q5VZL5 1548 aa29.04■■■□□ 2.24
HMGN1-209ENST00000463631 AKNAQ7Z591 1439 aa29.03■■■□□ 2.24
HMGN1-209ENST00000463631 RANGAP1P46060 587 aaPredicted RBP29.01■■■□□ 2.23
HMGN1-209ENST00000463631 PCF11O94913 1555 aaKnown RBP29■■■□□ 2.23
HMGN1-209ENST00000463631 ARID4BQ4LE39 1312 aaPredicted RBP28.95■■■□□ 2.23
HMGN1-209ENST00000463631 CDK13Q14004 1512 aaKnown RBP28.95■■■□□ 2.23
HMGN1-209ENST00000463631 RIMS1Q86UR5 1692 aaKnown RBP28.94■■■□□ 2.22
HMGN1-209ENST00000463631 MAGI2Q86UL8 1455 aa28.94■■■□□ 2.22
HMGN1-209ENST00000463631 LMTK3Q96Q04 1460 aa28.94■■■□□ 2.22
HMGN1-209ENST00000463631 ZFYVE16Q7Z3T8 1539 aa28.94■■■□□ 2.22
HMGN1-209ENST00000463631 SIGLEC1Q9BZZ2 1709 aa28.89■■■□□ 2.22
HMGN1-209ENST00000463631 POGZQ7Z3K3 1410 aa28.89■■■□□ 2.22
HMGN1-209ENST00000463631 HECW1Q76N89 1606 aa28.89■■■□□ 2.22
HMGN1-209ENST00000463631 PLCH2O75038 1416 aa28.87■■■□□ 2.21
HMGN1-209ENST00000463631 YEATS2Q9ULM3 1422 aa28.87■■■□□ 2.21
HMGN1-209ENST00000463631 FMN1Q68DA7 1419 aa28.86■■■□□ 2.21
HMGN1-209ENST00000463631 FBXO41Q8TF61 875 aa28.83■■■□□ 2.21
HMGN1-209ENST00000463631 MYO5CQ9NQX4 1742 aa28.83■■■□□ 2.21
HMGN1-209ENST00000463631 ARHGAP35Q9NRY4 1499 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms