RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 PRG4Q92954 1404 aaPredicted RBP35.06■■■■□ 3.2
PRDM16-204ENST00000463591 CARMIL1Q5VZK9 1371 aa35.02■■■■□ 3.2
PRDM16-204ENST00000463591 RUSC2Q8N2Y8 1516 aa35.02■■■■□ 3.2
PRDM16-204ENST00000463591 KIAA0586Q9BVV6 1533 aa35■■■■□ 3.19
PRDM16-204ENST00000463591 RAPGEF2Q9Y4G8 1499 aa34.74■■■■□ 3.15
PRDM16-204ENST00000463591 NPM1P06748 294 aaKnown RBP eCLIP34.69■■■■□ 3.14
PRDM16-204ENST00000463591 CARMIL2Q6F5E8 1435 aa34.66■■■■□ 3.14
PRDM16-204ENST00000463591 IQGAP2Q13576 1575 aa34.66■■■■□ 3.14
PRDM16-204ENST00000463591 PTPRGP23470 1445 aa34.61■■■■□ 3.13
PRDM16-204ENST00000463591 TNIKQ9UKE5 1360 aa34.58■■■■□ 3.13
PRDM16-204ENST00000463591 ADCY10Q96PN6 1610 aa34.54■■■■□ 3.12
PRDM16-204ENST00000463591 MAPKBP1O60336 1514 aa34.49■■■■□ 3.11
PRDM16-204ENST00000463591 UGGT2Q9NYU1 1516 aa34.48■■■■□ 3.11
PRDM16-204ENST00000463591 PRXQ9BXM0 1461 aa34.46■■■■□ 3.11
PRDM16-204ENST00000463591 DISP1Q96F81 1524 aa34.46■■■■□ 3.11
PRDM16-204ENST00000463591 TTBK1Q5TCY1 1321 aaPredicted RBP34.45■■■■□ 3.11
PRDM16-204ENST00000463591 ABCC10Q5T3U5 1492 aa34.42■■■■□ 3.1
PRDM16-204ENST00000463591 KIF13AQ9H1H9 1805 aa34.4■■■■□ 3.1
PRDM16-204ENST00000463591 FAM69CQ0P6D2 419 aa34.4■■■■□ 3.1
PRDM16-204ENST00000463591 CSRNP3Q8WYN3 585 aa34.36■■■■□ 3.09
PRDM16-204ENST00000463591 UHRF1BP1LA0JNW5 1464 aa34.35■■■■□ 3.09
PRDM16-204ENST00000463591 UACAQ9BZF9 1416 aa34.34■■■■□ 3.09
PRDM16-204ENST00000463591 CTTNBP2Q8WZ74 1663 aa34.34■■■■□ 3.09
PRDM16-204ENST00000463591 ABCC2Q92887 1545 aa34.33■■■■□ 3.09
PRDM16-204ENST00000463591 KIAA0556O60303 1618 aa34.31■■■■□ 3.08
PRDM16-204ENST00000463591 EEA1Q15075 1411 aa34.3■■■■□ 3.08
PRDM16-204ENST00000463591 GOLGA3Q08378 1498 aa34.28■■■■□ 3.08
PRDM16-204ENST00000463591 DIP2BQ9P265 1576 aa34.28■■■■□ 3.08
PRDM16-204ENST00000463591 PLB1Q6P1J6 1458 aa34.2■■■■□ 3.06
PRDM16-204ENST00000463591 ASXL2Q76L83 1435 aa34.17■■■■□ 3.06
PRDM16-204ENST00000463591 KDM5BQ9UGL1 1544 aa34.16■■■■□ 3.06
PRDM16-204ENST00000463591 FAM9AQ8IZU1 332 aaPredicted RBP34.11■■■■□ 3.05
PRDM16-204ENST00000463591 GLI2P10070 1586 aa34.04■■■■□ 3.04
PRDM16-204ENST00000463591 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
PRDM16-204ENST00000463591 ZCCHC11Q5TAX3 1644 aaKnown RBP34.02■■■■□ 3.04
PRDM16-204ENST00000463591 ABCA8O94911 1581 aa34■■■■□ 3.03
PRDM16-204ENST00000463591 TSPOAP1O95153 1857 aa33.97■■■■□ 3.03
PRDM16-204ENST00000463591 EPRSP07814 1512 aaKnown RBP33.96■■■■□ 3.03
PRDM16-204ENST00000463591 P3H3Q8IVL6 736 aa33.96■■■■□ 3.03
PRDM16-204ENST00000463591 SAMD9Q5K651 1589 aa33.9■■■■□ 3.02
PRDM16-204ENST00000463591 WDR7Q9Y4E6 1490 aa33.9■■■■□ 3.02
PRDM16-204ENST00000463591 KDM6BO15054 1643 aa33.9■■■■□ 3.02
PRDM16-204ENST00000463591 KIF21BO75037 1637 aa33.89■■■■□ 3.02
PRDM16-204ENST00000463591 AEBP2Q6ZN18 517 aaPredicted RBP33.86■■■■□ 3.01
PRDM16-204ENST00000463591 MAP3K4Q9Y6R4 1608 aa33.82■■■■□ 3
PRDM16-204ENST00000463591 PPRC1Q5VV67 1664 aaKnown RBP33.8■■■■□ 3
PRDM16-204ENST00000463591 TEX14Q8IWB6 1497 aa33.78■■■■□ 3
PRDM16-204ENST00000463591 RANGAP1P46060 587 aaPredicted RBP33.78■■■■□ 3
PRDM16-204ENST00000463591 KCNH8Q96L42 1107 aa33.77■■■■□ 3
PRDM16-204ENST00000463591 ATP10BO94823 1461 aa33.76■■■□□ 2.99
PRDM16-204ENST00000463591 UBTFP17480 764 aaKnown RBP33.7■■■□□ 2.99
PRDM16-204ENST00000463591 RAPGEF6Q8TEU7 1601 aa33.7■■■□□ 2.99
PRDM16-204ENST00000463591 ARID3CA6NKF2 412 aa33.69■■■□□ 2.98
PRDM16-204ENST00000463591 FHOD3Q2V2M9 1422 aa33.69■■■□□ 2.98
PRDM16-204ENST00000463591 CD109Q6YHK3 1445 aa33.69■■■□□ 2.98
PRDM16-204ENST00000463591 EFCAB5A4FU69 1503 aa33.69■■■□□ 2.98
PRDM16-204ENST00000463591 CFAP43Q8NDM7 1665 aa33.65■■■□□ 2.98
PRDM16-204ENST00000463591 MAGI3Q5TCQ9 1506 aa33.65■■■□□ 2.98
PRDM16-204ENST00000463591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.61■■■□□ 2.97
PRDM16-204ENST00000463591 HNRNPUL2Q1KMD3 747 aaKnown RBP33.61■■■□□ 2.97
PRDM16-204ENST00000463591 COL17A1Q9UMD9 1497 aaPredicted RBP33.6■■■□□ 2.97
PRDM16-204ENST00000463591 EHMT2Q96KQ7 1210 aa33.59■■■□□ 2.97
PRDM16-204ENST00000463591 NUP153P49790 1475 aaKnown RBP33.58■■■□□ 2.97
PRDM16-204ENST00000463591 PLEKHD1A6NEE1 506 aa33.5■■■□□ 2.95
PRDM16-204ENST00000463591 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
PRDM16-204ENST00000463591 KDM4FA0A1W2PPD8 638 aa33.44■■■□□ 2.94
PRDM16-204ENST00000463591 PHLDB1Q86UU1 1377 aa33.44■■■□□ 2.94
PRDM16-204ENST00000463591 FMN1Q68DA7 1419 aa33.44■■■□□ 2.94
PRDM16-204ENST00000463591 ARHGAP35Q9NRY4 1499 aa33.42■■■□□ 2.94
PRDM16-204ENST00000463591 ARAP3Q8WWN8 1544 aa33.38■■■□□ 2.93
PRDM16-204ENST00000463591 NEO1Q92859 1461 aa33.31■■■□□ 2.92
PRDM16-204ENST00000463591 ATP1B4Q9UN42 357 aaPredicted RBP33.3■■■□□ 2.92
PRDM16-204ENST00000463591 CDK11AQ9UQ88 783 aaPredicted RBP33.26■■■□□ 2.91
PRDM16-204ENST00000463591 HECW1Q76N89 1606 aa33.26■■■□□ 2.91
PRDM16-204ENST00000463591 CDK13Q14004 1512 aaKnown RBP33.26■■■□□ 2.91
PRDM16-204ENST00000463591 ADGRL1O94910 1474 aa33.22■■■□□ 2.91
PRDM16-204ENST00000463591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.21■■■□□ 2.91
PRDM16-204ENST00000463591 RAPGEF3O95398 923 aa33.16■■■□□ 2.9
PRDM16-204ENST00000463591 FANCAO15360 1455 aa33.12■■■□□ 2.89
PRDM16-204ENST00000463591 AKNAQ7Z591 1439 aa33.12■■■□□ 2.89
PRDM16-204ENST00000463591 TTC37Q6PGP7 1564 aa33.1■■■□□ 2.89
PRDM16-204ENST00000463591 CFAP74Q9C0B2 1584 aa33.1■■■□□ 2.89
PRDM16-204ENST00000463591 PLCH2O75038 1416 aa33.08■■■□□ 2.89
PRDM16-204ENST00000463591 CASKIN1Q8WXD9 1431 aa33.08■■■□□ 2.89
PRDM16-204ENST00000463591 DENND4BO75064 1496 aaPredicted RBP33.07■■■□□ 2.88
PRDM16-204ENST00000463591 CLIP1P30622 1438 aa33.05■■■□□ 2.88
PRDM16-204ENST00000463591 TROQ12816 1431 aaPredicted RBP33.05■■■□□ 2.88
PRDM16-204ENST00000463591 FRMPD1Q5SYB0 1578 aa33.01■■■□□ 2.88
PRDM16-204ENST00000463591 CCDC18Q5T9S5 1454 aa33.01■■■□□ 2.88
PRDM16-204ENST00000463591 EFCAB2Q5VUJ9 269 aa32.99■■■□□ 2.87
PRDM16-204ENST00000463591 KIF14Q15058 1648 aa32.97■■■□□ 2.87
PRDM16-204ENST00000463591 PCF11O94913 1555 aaKnown RBP32.96■■■□□ 2.87
PRDM16-204ENST00000463591 LRRIQ1Q96JM4 1722 aa32.96■■■□□ 2.87
PRDM16-204ENST00000463591 FYCO1Q9BQS8 1478 aa32.95■■■□□ 2.87
PRDM16-204ENST00000463591 RICTORQ6R327 1708 aa32.94■■■□□ 2.86
PRDM16-204ENST00000463591 SCAPERQ9BY12 1400 aa32.92■■■□□ 2.86
PRDM16-204ENST00000463591 MYO5CQ9NQX4 1742 aa32.91■■■□□ 2.86
PRDM16-204ENST00000463591 MAGI2Q86UL8 1455 aa32.87■■■□□ 2.85
PRDM16-204ENST00000463591 ZMYM4Q5VZL5 1548 aa32.87■■■□□ 2.85
PRDM16-204ENST00000463591 ARID4BQ4LE39 1312 aaPredicted RBP32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms