RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CFDP1Q9UEE9 299 aaPredicted RBP17.33■□□□□ 0.36
NUP58-206ENST00000463407 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
NUP58-206ENST00000463407 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
NUP58-206ENST00000463407 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
NUP58-206ENST00000463407 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
NUP58-206ENST00000463407 TMC1Q8TDI8 760 aa17.29■□□□□ 0.36
NUP58-206ENST00000463407 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
NUP58-206ENST00000463407 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.35
NUP58-206ENST00000463407 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
NUP58-206ENST00000463407 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
NUP58-206ENST00000463407 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
NUP58-206ENST00000463407 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
NUP58-206ENST00000463407 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
NUP58-206ENST00000463407 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
NUP58-206ENST00000463407 FKBP8Q14318 412 aa17.18■□□□□ 0.34
NUP58-206ENST00000463407 ANP32AP39687 249 aaKnown RBP17.18■□□□□ 0.34
NUP58-206ENST00000463407 HIRIP3Q9BW71 556 aaPredicted RBP17.18■□□□□ 0.34
NUP58-206ENST00000463407 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
NUP58-206ENST00000463407 MLECQ14165 292 aa17.15■□□□□ 0.34
NUP58-206ENST00000463407 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
NUP58-206ENST00000463407 CUX2O14529 1486 aa17.13■□□□□ 0.33
NUP58-206ENST00000463407 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
NUP58-206ENST00000463407 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
NUP58-206ENST00000463407 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
NUP58-206ENST00000463407 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
NUP58-206ENST00000463407 CARMIL1Q5VZK9 1371 aa17.1■□□□□ 0.33
NUP58-206ENST00000463407 CCNB3Q8WWL7 1395 aa17.1■□□□□ 0.33
NUP58-206ENST00000463407 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
NUP58-206ENST00000463407 POGKQ9P215 609 aa17.09■□□□□ 0.33
NUP58-206ENST00000463407 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.33
NUP58-206ENST00000463407 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
NUP58-206ENST00000463407 ARXQ96QS3 562 aa17.05■□□□□ 0.32
NUP58-206ENST00000463407 CDCA8Q53HL2 280 aa17.05■□□□□ 0.32
NUP58-206ENST00000463407 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
NUP58-206ENST00000463407 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
NUP58-206ENST00000463407 CFAP53Q96M91 514 aa17.03■□□□□ 0.32
NUP58-206ENST00000463407 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
NUP58-206ENST00000463407 KANK1Q14678 1352 aa17.03■□□□□ 0.32
NUP58-206ENST00000463407 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.31
NUP58-206ENST00000463407 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
NUP58-206ENST00000463407 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
NUP58-206ENST00000463407 CCDC136Q96JN2 1154 aa16.99■□□□□ 0.31
NUP58-206ENST00000463407 SOGA1O94964 1423 aa16.99■□□□□ 0.31
NUP58-206ENST00000463407 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
NUP58-206ENST00000463407 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
NUP58-206ENST00000463407 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
NUP58-206ENST00000463407 MIER1Q8N108 512 aa16.97■□□□□ 0.31
NUP58-206ENST00000463407 GGT6Q6P531 493 aa16.95■□□□□ 0.3
NUP58-206ENST00000463407 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
NUP58-206ENST00000463407 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
NUP58-206ENST00000463407 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
NUP58-206ENST00000463407 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
NUP58-206ENST00000463407 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
NUP58-206ENST00000463407 NPHP1O15259 732 aa16.88■□□□□ 0.29
NUP58-206ENST00000463407 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
NUP58-206ENST00000463407 SIN3AQ96ST3 1273 aa16.87■□□□□ 0.29
NUP58-206ENST00000463407 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
NUP58-206ENST00000463407 DCAF11Q8TEB1 546 aa16.87■□□□□ 0.29
NUP58-206ENST00000463407 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
NUP58-206ENST00000463407 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
NUP58-206ENST00000463407 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
NUP58-206ENST00000463407 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
NUP58-206ENST00000463407 WIZO95785 1651 aa16.84■□□□□ 0.29
NUP58-206ENST00000463407 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
NUP58-206ENST00000463407 SOX12O15370 315 aa16.84■□□□□ 0.29
NUP58-206ENST00000463407 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
NUP58-206ENST00000463407 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
NUP58-206ENST00000463407 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
NUP58-206ENST00000463407 STK26Q9P289 416 aa16.81■□□□□ 0.28
NUP58-206ENST00000463407 ARHGAP35Q9NRY4 1499 aa16.81■□□□□ 0.28
NUP58-206ENST00000463407 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
NUP58-206ENST00000463407 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
NUP58-206ENST00000463407 TMF1P82094 1093 aa16.79■□□□□ 0.28
NUP58-206ENST00000463407 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
NUP58-206ENST00000463407 PKD2Q13563 968 aa16.74■□□□□ 0.27
NUP58-206ENST00000463407 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
NUP58-206ENST00000463407 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
NUP58-206ENST00000463407 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
NUP58-206ENST00000463407 FMN1Q68DA7 1419 aa16.72■□□□□ 0.27
NUP58-206ENST00000463407 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.26
NUP58-206ENST00000463407 KIF3BO15066 747 aa16.7■□□□□ 0.26
NUP58-206ENST00000463407 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
NUP58-206ENST00000463407 JPH4Q96JJ6 628 aa16.69■□□□□ 0.26
NUP58-206ENST00000463407 FOXD1Q16676 465 aa16.69■□□□□ 0.26
NUP58-206ENST00000463407 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
NUP58-206ENST00000463407 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
NUP58-206ENST00000463407 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
NUP58-206ENST00000463407 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
NUP58-206ENST00000463407 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
NUP58-206ENST00000463407 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
NUP58-206ENST00000463407 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
NUP58-206ENST00000463407 ANKRD30AQ9BXX3 1397 aa16.66■□□□□ 0.26
NUP58-206ENST00000463407 NBR1Q14596 966 aa16.66■□□□□ 0.26
NUP58-206ENST00000463407 FRAT1Q92837 279 aaPredicted RBP16.66■□□□□ 0.26
NUP58-206ENST00000463407 OS9Q13438 667 aaPredicted RBP16.65■□□□□ 0.26
NUP58-206ENST00000463407 NUP155O75694 1391 aa16.65■□□□□ 0.26
NUP58-206ENST00000463407 CSB-PGBD3P0DP91 1061 aa16.65■□□□□ 0.26
NUP58-206ENST00000463407 SMARCA4P51532 1647 aa16.64■□□□□ 0.26
NUP58-206ENST00000463407 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
NUP58-206ENST00000463407 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 333.8 ms