RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 CCDC9Q9Y3X0 531 aaKnown RBP8.18□□□□□ -1.1
TRA2B-207ENST00000463328 TOP2AP11388 1531 aaKnown RBP8.18□□□□□ -1.1
TRA2B-207ENST00000463328 HSP90B1P14625 803 aaKnown RBP8.14□□□□□ -1.11
TRA2B-207ENST00000463328 EIF4G1Q04637 1599 aaKnown RBP8.14□□□□□ -1.11
TRA2B-207ENST00000463328 ARID3AQ99856 593 aa8.14□□□□□ -1.11
TRA2B-207ENST00000463328 PKD2Q13563 968 aa8.11□□□□□ -1.11
TRA2B-207ENST00000463328 SMARCA2P51531 1590 aa8.1□□□□□ -1.11
TRA2B-207ENST00000463328 TAF7LQ5H9L4 462 aa8.09□□□□□ -1.11
TRA2B-207ENST00000463328 C1orf115Q9H7X2 142 aa8.09□□□□□ -1.11
TRA2B-207ENST00000463328 BBXQ8WY36 941 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-207ENST00000463328 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-207ENST00000463328 CCDC88BA6NC98 1476 aa8.07□□□□□ -1.12
TRA2B-207ENST00000463328 PUS7Q96PZ0 661 aaKnown RBP8.07□□□□□ -1.12
TRA2B-207ENST00000463328 TRIM41Q8WV44 630 aa8.07□□□□□ -1.12
TRA2B-207ENST00000463328 ATAD2BQ9ULI0 1458 aa8.07□□□□□ -1.12
TRA2B-207ENST00000463328 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
TRA2B-207ENST00000463328 HMGB1P09429 215 aaKnown RBP8.05□□□□□ -1.12
TRA2B-207ENST00000463328 BCL11BQ9C0K0 894 aaPredicted RBP8.04□□□□□ -1.12
TRA2B-207ENST00000463328 ZNF428Q96B54 188 aa8.03□□□□□ -1.12
TRA2B-207ENST00000463328 NCAPD3P42695 1498 aa8.03□□□□□ -1.12
TRA2B-207ENST00000463328 BAZ1BQ9UIG0 1483 aaKnown RBP8.03□□□□□ -1.12
TRA2B-207ENST00000463328 ZBTB7CA1YPR0 619 aa8.02□□□□□ -1.13
TRA2B-207ENST00000463328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.02□□□□□ -1.13
TRA2B-207ENST00000463328 HMGXB3Q12766 1538 aa8.01□□□□□ -1.13
TRA2B-207ENST00000463328 NEFLP07196 543 aa7.99□□□□□ -1.13
TRA2B-207ENST00000463328 POLR3GLQ9BT43 218 aa7.97□□□□□ -1.13
TRA2B-207ENST00000463328 PKNOX2Q96KN3 472 aa7.96□□□□□ -1.13
TRA2B-207ENST00000463328 EEA1Q15075 1411 aa7.95□□□□□ -1.14
TRA2B-207ENST00000463328 ZMYND15Q9H091 742 aa7.94□□□□□ -1.14
TRA2B-207ENST00000463328 SPRYD3Q8NCJ5 442 aa7.94□□□□□ -1.14
TRA2B-207ENST00000463328 RGS22Q8NE09 1264 aa7.92□□□□□ -1.14
TRA2B-207ENST00000463328 ARID3CA6NKF2 412 aa7.92□□□□□ -1.14
TRA2B-207ENST00000463328 RSPH6AQ9H0K4 717 aa7.92□□□□□ -1.14
TRA2B-207ENST00000463328 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
TRA2B-207ENST00000463328 IFNLR1Q8IU57 520 aaPredicted RBP7.91□□□□□ -1.14
TRA2B-207ENST00000463328 ABCC8Q09428 1581 aa7.9□□□□□ -1.14
TRA2B-207ENST00000463328 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
TRA2B-207ENST00000463328 RAD21O60216 631 aa7.9□□□□□ -1.15
TRA2B-207ENST00000463328 FGD1P98174 961 aa7.89□□□□□ -1.15
TRA2B-207ENST00000463328 ZNF692Q9BU19 519 aaPredicted RBP7.89□□□□□ -1.15
TRA2B-207ENST00000463328 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
TRA2B-207ENST00000463328 WRNQ14191 1432 aaPredicted RBP eCLIP7.88□□□□□ -1.15
TRA2B-207ENST00000463328 FOXD4L5Q5VV16 416 aaPredicted RBP7.88□□□□□ -1.15
TRA2B-207ENST00000463328 FOXD4L4Q8WXT5 416 aaPredicted RBP7.88□□□□□ -1.15
TRA2B-207ENST00000463328 BRPF3Q9ULD4 1205 aa7.88□□□□□ -1.15
TRA2B-207ENST00000463328 CCDC136Q96JN2 1154 aa7.86□□□□□ -1.15
TRA2B-207ENST00000463328 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
TRA2B-207ENST00000463328 BIVM-ERCC5R4GMW8 1640 aa7.84□□□□□ -1.15
TRA2B-207ENST00000463328 CFTRP13569 1480 aa7.84□□□□□ -1.15
TRA2B-207ENST00000463328 RBM25P49756 843 aaKnown RBP7.84□□□□□ -1.15
TRA2B-207ENST00000463328 PRDM2Q13029 1718 aa7.84□□□□□ -1.15
TRA2B-207ENST00000463328 TOP2BQ02880 1626 aa7.84□□□□□ -1.15
TRA2B-207ENST00000463328 TNIKQ9UKE5 1360 aa7.83□□□□□ -1.16
TRA2B-207ENST00000463328 BCCIPQ9P287 314 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRA2B-207ENST00000463328 SYNJ1O43426 1573 aa7.83□□□□□ -1.16
TRA2B-207ENST00000463328 CACNB1Q02641 598 aaPredicted RBP7.83□□□□□ -1.16
TRA2B-207ENST00000463328 NEUROD2Q15784 382 aa7.82□□□□□ -1.16
TRA2B-207ENST00000463328 RSPH4AQ5TD94 716 aa7.82□□□□□ -1.16
TRA2B-207ENST00000463328 ZFP91Q96JP5 570 aaPredicted RBP7.82□□□□□ -1.16
TRA2B-207ENST00000463328 CADPSQ9ULU8 1353 aa7.82□□□□□ -1.16
TRA2B-207ENST00000463328 KIF21BO75037 1637 aa7.82□□□□□ -1.16
TRA2B-207ENST00000463328 SOGA1O94964 1423 aa7.81□□□□□ -1.16
TRA2B-207ENST00000463328 PCGF6Q9BYE7 350 aa7.81□□□□□ -1.16
TRA2B-207ENST00000463328 TMED8Q6PL24 325 aaPredicted RBP7.8□□□□□ -1.16
TRA2B-207ENST00000463328 VASPP50552 380 aaPredicted RBP7.79□□□□□ -1.16
TRA2B-207ENST00000463328 FAM177A1Q8N128 213 aaPredicted RBP7.79□□□□□ -1.16
TRA2B-207ENST00000463328 GOLGA3Q08378 1498 aa7.79□□□□□ -1.16
TRA2B-207ENST00000463328 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
TRA2B-207ENST00000463328 CWC22Q9HCG8 908 aaKnown RBP7.79□□□□□ -1.16
TRA2B-207ENST00000463328 CEP164Q9UPV0 1460 aa7.78□□□□□ -1.16
TRA2B-207ENST00000463328 APBB1O00213 710 aa7.78□□□□□ -1.16
TRA2B-207ENST00000463328 RUSC2Q8N2Y8 1516 aa7.77□□□□□ -1.17
TRA2B-207ENST00000463328 CERS3Q8IU89 383 aa7.75□□□□□ -1.17
TRA2B-207ENST00000463328 USP35Q9P2H5 1018 aa7.75□□□□□ -1.17
TRA2B-207ENST00000463328 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.75□□□□□ -1.17
TRA2B-207ENST00000463328 A0A0U1RQG5 324 aaPredicted RBP7.75□□□□□ -1.17
TRA2B-207ENST00000463328 TICAM2Q86XR7 235 aa7.75□□□□□ -1.17
TRA2B-207ENST00000463328 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
TRA2B-207ENST00000463328 RGL2O15211 777 aa7.74□□□□□ -1.17
TRA2B-207ENST00000463328 ERICH3Q5RHP9 1530 aa7.74□□□□□ -1.17
TRA2B-207ENST00000463328 CUX1P39880 1505 aa7.73□□□□□ -1.17
TRA2B-207ENST00000463328 LAMC3Q9Y6N6 1575 aa7.72□□□□□ -1.17
TRA2B-207ENST00000463328 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.18
TRA2B-207ENST00000463328 PRXQ9BXM0 1461 aa7.71□□□□□ -1.18
TRA2B-207ENST00000463328 ZEB1P37275 1124 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-207ENST00000463328 MAPK8IP2Q13387 824 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-207ENST00000463328 MFAP1P55081 439 aaKnown RBP7.7□□□□□ -1.18
TRA2B-207ENST00000463328 AEBP1Q8IUX7 1158 aa7.7□□□□□ -1.18
TRA2B-207ENST00000463328 FANCD2Q9BXW9 1451 aa7.7□□□□□ -1.18
TRA2B-207ENST00000463328 ECM2O94769 699 aaPredicted RBP7.7□□□□□ -1.18
TRA2B-207ENST00000463328 PDS5BQ9NTI5 1447 aa7.7□□□□□ -1.18
TRA2B-207ENST00000463328 KIF27Q86VH2 1401 aa7.69□□□□□ -1.18
TRA2B-207ENST00000463328 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
TRA2B-207ENST00000463328 PPM1GO15355 546 aaPredicted RBP7.66□□□□□ -1.18
TRA2B-207ENST00000463328 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
TRA2B-207ENST00000463328 ATXN8OSP0DMR3 200 aa7.66□□□□□ -1.18
TRA2B-207ENST00000463328 TMCO4Q5TGY1 634 aa7.66□□□□□ -1.18
TRA2B-207ENST00000463328 PRDM16Q9HAZ2 1276 aa7.66□□□□□ -1.18
TRA2B-207ENST00000463328 ANO8Q9HCE9 1232 aaPredicted RBP7.66□□□□□ -1.18
TRA2B-207ENST00000463328 RAPGEF2Q9Y4G8 1499 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms