RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 MS4A3Q96HJ5 214 aa13.24□□□□□ -0.29
CHAMP1-202ENST00000463003 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
CHAMP1-202ENST00000463003 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
CHAMP1-202ENST00000463003 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
CHAMP1-202ENST00000463003 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
CHAMP1-202ENST00000463003 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
CHAMP1-202ENST00000463003 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
CHAMP1-202ENST00000463003 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
CHAMP1-202ENST00000463003 MAP3K13O43283 966 aa13.08□□□□□ -0.32
CHAMP1-202ENST00000463003 NUBP1P53384 320 aa13.08□□□□□ -0.32
CHAMP1-202ENST00000463003 C7P10643 843 aa13.07□□□□□ -0.32
CHAMP1-202ENST00000463003 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
CHAMP1-202ENST00000463003 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
CHAMP1-202ENST00000463003 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
CHAMP1-202ENST00000463003 TIE1P35590 1138 aa13.02□□□□□ -0.33
CHAMP1-202ENST00000463003 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
CHAMP1-202ENST00000463003 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
CHAMP1-202ENST00000463003 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
CHAMP1-202ENST00000463003 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
CHAMP1-202ENST00000463003 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
CHAMP1-202ENST00000463003 TRPC6Q9Y210 931 aa12.97□□□□□ -0.33
CHAMP1-202ENST00000463003 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
CHAMP1-202ENST00000463003 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
CHAMP1-202ENST00000463003 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
CHAMP1-202ENST00000463003 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
CHAMP1-202ENST00000463003 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
CHAMP1-202ENST00000463003 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
CHAMP1-202ENST00000463003 IER5LQ5T953 404 aa12.84□□□□□ -0.35
CHAMP1-202ENST00000463003 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
CHAMP1-202ENST00000463003 SEC24BO95487 1268 aa12.83□□□□□ -0.36
CHAMP1-202ENST00000463003 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
CHAMP1-202ENST00000463003 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
CHAMP1-202ENST00000463003 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
CHAMP1-202ENST00000463003 PYGBP11216 843 aa12.81□□□□□ -0.36
CHAMP1-202ENST00000463003 GSE1Q14687 1217 aa12.81□□□□□ -0.36
CHAMP1-202ENST00000463003 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
CHAMP1-202ENST00000463003 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
CHAMP1-202ENST00000463003 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
CHAMP1-202ENST00000463003 ZNF467Q7Z7K2 595 aaPredicted RBP12.7□□□□□ -0.38
CHAMP1-202ENST00000463003 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
CHAMP1-202ENST00000463003 PLCG2P16885 1265 aa12.69□□□□□ -0.38
CHAMP1-202ENST00000463003 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
CHAMP1-202ENST00000463003 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
CHAMP1-202ENST00000463003 POTEMA6NI47 508 aa12.64□□□□□ -0.39
CHAMP1-202ENST00000463003 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
CHAMP1-202ENST00000463003 POTEGQ6S5H5 508 aa12.61□□□□□ -0.39
CHAMP1-202ENST00000463003 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
CHAMP1-202ENST00000463003 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
CHAMP1-202ENST00000463003 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
CHAMP1-202ENST00000463003 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
CHAMP1-202ENST00000463003 PSEN1P49768 467 aa12.55□□□□□ -0.4
CHAMP1-202ENST00000463003 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
CHAMP1-202ENST00000463003 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
CHAMP1-202ENST00000463003 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
CHAMP1-202ENST00000463003 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
CHAMP1-202ENST00000463003 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
CHAMP1-202ENST00000463003 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
CHAMP1-202ENST00000463003 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
CHAMP1-202ENST00000463003 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
CHAMP1-202ENST00000463003 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
CHAMP1-202ENST00000463003 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
CHAMP1-202ENST00000463003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.427e-7■■■□□ 14.8
CHAMP1-202ENST00000463003 C3orf67Q6ZVT6 689 aa12.39□□□□□ -0.43
CHAMP1-202ENST00000463003 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
CHAMP1-202ENST00000463003 SNPHO15079 494 aa12.38□□□□□ -0.43
CHAMP1-202ENST00000463003 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
CHAMP1-202ENST00000463003 ST18O60284 1047 aa12.35□□□□□ -0.43
CHAMP1-202ENST00000463003 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
CHAMP1-202ENST00000463003 G3V3G9 751 aa12.3□□□□□ -0.44
CHAMP1-202ENST00000463003 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
CHAMP1-202ENST00000463003 DPY19L2Q6NUT2 758 aa12.26□□□□□ -0.45
CHAMP1-202ENST00000463003 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
CHAMP1-202ENST00000463003 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
CHAMP1-202ENST00000463003 EFCAB3Q8N7B9 438 aa12.23□□□□□ -0.45
CHAMP1-202ENST00000463003 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
CHAMP1-202ENST00000463003 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
CHAMP1-202ENST00000463003 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
CHAMP1-202ENST00000463003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
CHAMP1-202ENST00000463003 SOX12O15370 315 aa12.17□□□□□ -0.46
CHAMP1-202ENST00000463003 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
CHAMP1-202ENST00000463003 MARVELD3Q96A59 401 aa12.14□□□□□ -0.47
CHAMP1-202ENST00000463003 EMP3P54852 163 aa12.11□□□□□ -0.47
CHAMP1-202ENST00000463003 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
CHAMP1-202ENST00000463003 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
CHAMP1-202ENST00000463003 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
CHAMP1-202ENST00000463003 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
CHAMP1-202ENST00000463003 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
CHAMP1-202ENST00000463003 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
CHAMP1-202ENST00000463003 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
CHAMP1-202ENST00000463003 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
CHAMP1-202ENST00000463003 NLRP6P59044 892 aa12.03□□□□□ -0.48
CHAMP1-202ENST00000463003 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
CHAMP1-202ENST00000463003 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
CHAMP1-202ENST00000463003 HS3ST6Q96QI5 342 aa12□□□□□ -0.49
CHAMP1-202ENST00000463003 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
CHAMP1-202ENST00000463003 STK25O00506 426 aa11.99□□□□□ -0.49
CHAMP1-202ENST00000463003 HOXB1P14653 301 aaPredicted RBP11.98□□□□□ -0.49
CHAMP1-202ENST00000463003 PKD2Q13563 968 aa11.96□□□□□ -0.49
CHAMP1-202ENST00000463003 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
CHAMP1-202ENST00000463003 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms