RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMC4-203ENST00000462668 RIOK3O14730 519 aaKnown RBP6.02□□□□□ -1.45
SMC4-203ENST00000462668 GSE1Q14687 1217 aa6.01□□□□□ -1.45
SMC4-203ENST00000462668 ZNF692Q9BU19 519 aaPredicted RBP6.01□□□□□ -1.45
SMC4-203ENST00000462668 C1QBPQ07021 282 aaKnown RBP6.01□□□□□ -1.45
SMC4-203ENST00000462668 TRHP20396 242 aaPredicted RBP6.01□□□□□ -1.45
SMC4-203ENST00000462668 BRPF1P55201 1214 aaPredicted RBP6□□□□□ -1.45
SMC4-203ENST00000462668 MNX1P50219 401 aaPredicted RBP5.99□□□□□ -1.45
SMC4-203ENST00000462668 PLCD3Q8N3E9 789 aa5.99□□□□□ -1.45
SMC4-203ENST00000462668 PABPN1Q86U42 306 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMC4-203ENST00000462668 DSG3P32926 999 aa5.97□□□□□ -1.45
SMC4-203ENST00000462668 MIER1Q8N108 512 aa5.97□□□□□ -1.45
SMC4-203ENST00000462668 VGFO15240 615 aaPredicted RBP5.97□□□□□ -1.45
SMC4-203ENST00000462668 P3H3Q8IVL6 736 aa5.96□□□□□ -1.46
SMC4-203ENST00000462668 OSCARQ8IYS5 282 aa5.95□□□□□ -1.46
SMC4-203ENST00000462668 CIZ1Q9ULV3 898 aaPredicted RBP5.94□□□□□ -1.46
SMC4-203ENST00000462668 RYDENQ9NUL5 291 aaKnown RBP5.93□□□□□ -1.46
SMC4-203ENST00000462668 KCNV2Q8TDN2 545 aa5.93□□□□□ -1.46
SMC4-203ENST00000462668 CAPN15O75808 1086 aa5.92□□□□□ -1.46
SMC4-203ENST00000462668 C14orf37Q86TY3 774 aa5.92□□□□□ -1.46
SMC4-203ENST00000462668 CADPS2Q86UW7 1296 aa5.92□□□□□ -1.46
SMC4-203ENST00000462668 LMOD2Q6P5Q4 547 aa5.91□□□□□ -1.46
SMC4-203ENST00000462668 ARIH1Q9Y4X5 557 aaPredicted RBP5.91□□□□□ -1.46
SMC4-203ENST00000462668 ZC3H15Q8WU90 426 aaKnown RBP5.9□□□□□ -1.47
SMC4-203ENST00000462668 CREBZFQ9NS37 354 aa5.89□□□□□ -1.47
SMC4-203ENST00000462668 TESPA1A2RU30 521 aaPredicted RBP5.88□□□□□ -1.47
SMC4-203ENST00000462668 ABCB7O75027 752 aa5.88□□□□□ -1.47
SMC4-203ENST00000462668 ZMYND10O75800 440 aa5.88□□□□□ -1.47
SMC4-203ENST00000462668 ARHGEF1Q92888 912 aaKnown RBP5.87□□□□□ -1.47
SMC4-203ENST00000462668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.87□□□□□ -1.47
SMC4-203ENST00000462668 ZFP91Q96JP5 570 aaPredicted RBP5.87□□□□□ -1.47
SMC4-203ENST00000462668 PLEKHG5O94827 1062 aa5.86□□□□□ -1.47
SMC4-203ENST00000462668 STK25O00506 426 aa5.84□□□□□ -1.48
SMC4-203ENST00000462668 BCL11BQ9C0K0 894 aaPredicted RBP5.82□□□□□ -1.48
SMC4-203ENST00000462668 RASEFQ8IZ41 740 aa5.81□□□□□ -1.48
SMC4-203ENST00000462668 MFSD10Q14728 455 aa5.8□□□□□ -1.48
SMC4-203ENST00000462668 FAM212AQ96EL1 285 aa5.79□□□□□ -1.48
SMC4-203ENST00000462668 BARGINQ6ZT62 677 aa5.79□□□□□ -1.48
SMC4-203ENST00000462668 MFRPQ9BY79 579 aa5.78□□□□□ -1.48
SMC4-203ENST00000462668 FBXO22Q8NEZ5 403 aa5.78□□□□□ -1.48
SMC4-203ENST00000462668 SLC24A3Q9HC58 644 aa5.77□□□□□ -1.49
SMC4-203ENST00000462668 STK24Q9Y6E0 443 aa5.77□□□□□ -1.49
SMC4-203ENST00000462668 CAMK2BQ13554 666 aa5.77□□□□□ -1.49
SMC4-203ENST00000462668 DCAF8Q5TAQ9 597 aa5.76□□□□□ -1.49
SMC4-203ENST00000462668 HRCP23327 699 aa5.75□□□□□ -1.49
SMC4-203ENST00000462668 ZMYND15Q9H091 742 aa5.74□□□□□ -1.49
SMC4-203ENST00000462668 NCKAP5LQ9HCH0 1330 aa5.73□□□□□ -1.49
SMC4-203ENST00000462668 UBTFP17480 764 aaKnown RBP5.73□□□□□ -1.49
SMC4-203ENST00000462668 SEMA3EO15041 775 aa5.72□□□□□ -1.49
SMC4-203ENST00000462668 E2F4Q16254 413 aa5.72□□□□□ -1.49
SMC4-203ENST00000462668 NEUROD2Q15784 382 aa5.71□□□□□ -1.49
SMC4-203ENST00000462668 C1orf115Q9H7X2 142 aa5.7□□□□□ -1.5
SMC4-203ENST00000462668 PPP1R37O75864 691 aa5.7□□□□□ -1.5
SMC4-203ENST00000462668 SUPT5HO00267 1087 aaKnown RBP5.7□□□□□ -1.5
SMC4-203ENST00000462668 SPDYE1Q8NFV5 336 aaPredicted RBP5.7□□□□□ -1.5
SMC4-203ENST00000462668 WDR70Q9NW82 654 aa5.7□□□□□ -1.5
SMC4-203ENST00000462668 ONECUT3O60422 494 aaPredicted RBP5.69□□□□□ -1.5
SMC4-203ENST00000462668 TRIM26Q12899 539 aaPredicted RBP5.69□□□□□ -1.5
SMC4-203ENST00000462668 CRISPLD2Q9H0B8 497 aa5.69□□□□□ -1.5
SMC4-203ENST00000462668 GPR37O15354 613 aa5.69□□□□□ -1.5
SMC4-203ENST00000462668 ZNF579Q8NAF0 562 aaKnown RBP5.69□□□□□ -1.5
SMC4-203ENST00000462668 AKT1S1Q96B36 256 aa5.69□□□□□ -1.5
SMC4-203ENST00000462668 ZNF467Q7Z7K2 595 aaPredicted RBP5.69□□□□□ -1.5
SMC4-203ENST00000462668 PDAP1Q13442 181 aaKnown RBP5.68□□□□□ -1.5
SMC4-203ENST00000462668 AK7Q96M32 723 aa5.68□□□□□ -1.5
SMC4-203ENST00000462668 PODXL2Q9NZ53 605 aa5.68□□□□□ -1.5
SMC4-203ENST00000462668 PYGBP11216 843 aa5.67□□□□□ -1.5
SMC4-203ENST00000462668 RSPH6AQ9H0K4 717 aa5.67□□□□□ -1.5
SMC4-203ENST00000462668 SOX12O15370 315 aa5.66□□□□□ -1.5
SMC4-203ENST00000462668 ILDR1Q86SU0 546 aaPredicted RBP5.66□□□□□ -1.5
SMC4-203ENST00000462668 CCDC61Q9Y6R9 512 aa5.64□□□□□ -1.51
SMC4-203ENST00000462668 GOPCQ9HD26 462 aa5.64□□□□□ -1.51
SMC4-203ENST00000462668 SMYD5Q6GMV2 418 aa5.64□□□□□ -1.51
SMC4-203ENST00000462668 KDM4CQ9H3R0 1056 aa5.64□□□□□ -1.51
SMC4-203ENST00000462668 TRIM66O15016 1216 aa5.63□□□□□ -1.51
SMC4-203ENST00000462668 PLEKHG3A1L390 1219 aa5.63□□□□□ -1.51
SMC4-203ENST00000462668 MS4A4AQ96JQ5 239 aa5.63□□□□□ -1.51
SMC4-203ENST00000462668 PSEN1P49768 467 aa5.6□□□□□ -1.51
SMC4-203ENST00000462668 NLRP6P59044 892 aa5.6□□□□□ -1.51
SMC4-203ENST00000462668 REM2Q8IYK8 340 aaPredicted RBP5.6□□□□□ -1.51
SMC4-203ENST00000462668 GPBP1L1Q9HC44 474 aaPredicted RBP5.6□□□□□ -1.51
SMC4-203ENST00000462668 A6NJR5 290 aa5.6□□□□□ -1.51
SMC4-203ENST00000462668 AMHR2Q16671 573 aa5.6□□□□□ -1.51
SMC4-203ENST00000462668 PRR29P0C7W0 189 aa5.59□□□□□ -1.51
SMC4-203ENST00000462668 PDE4DQ08499 809 aa5.59□□□□□ -1.51
SMC4-203ENST00000462668 MKRN3Q13064 507 aaKnown RBP5.58□□□□□ -1.52
SMC4-203ENST00000462668 PDE4AP27815 886 aa5.57□□□□□ -1.52
SMC4-203ENST00000462668 MLLT3P42568 568 aaPredicted RBP5.56□□□□□ -1.52
SMC4-203ENST00000462668 PCDHB8Q9UN66 801 aa5.56□□□□□ -1.52
SMC4-203ENST00000462668 PCDHB13Q9Y5F0 798 aa5.56□□□□□ -1.52
SMC4-203ENST00000462668 RBM26Q5T8P6 1007 aaKnown RBP5.56□□□□□ -1.52
SMC4-203ENST00000462668 EFCAB3Q8N7B9 438 aa5.56□□□□□ -1.52
SMC4-203ENST00000462668 GPIHBP1Q8IV16 184 aa5.55□□□□□ -1.52
SMC4-203ENST00000462668 PHF8Q9UPP1 1060 aa5.55□□□□□ -1.52
SMC4-203ENST00000462668 PDIA6Q15084 440 aa5.55□□□□□ -1.52
SMC4-203ENST00000462668 FLIIQ13045 1269 aa5.55□□□□□ -1.52
SMC4-203ENST00000462668 FNBP4Q8N3X1 1017 aaPredicted RBP5.54□□□□□ -1.52
SMC4-203ENST00000462668 DDX27Q96GQ7 796 aaKnown RBP5.54□□□□□ -1.52
SMC4-203ENST00000462668 TMUB1Q9BVT8 246 aa5.54□□□□□ -1.52
SMC4-203ENST00000462668 NPM2Q86SE8 214 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms