RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
CDC42BPA-210ENST00000462553 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
CDC42BPA-210ENST00000462553 NUP160Q12769 1436 aa14.34□□□□□ -0.11
CDC42BPA-210ENST00000462553 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
CDC42BPA-210ENST00000462553 SUPT5HO00267 1087 aaKnown RBP14.32□□□□□ -0.12
CDC42BPA-210ENST00000462553 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
CDC42BPA-210ENST00000462553 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
CDC42BPA-210ENST00000462553 KIF13AQ9H1H9 1805 aa14.26□□□□□ -0.13
CDC42BPA-210ENST00000462553 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
CDC42BPA-210ENST00000462553 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
CDC42BPA-210ENST00000462553 ADCY10Q96PN6 1610 aa14.12□□□□□ -0.15
CDC42BPA-210ENST00000462553 CUL7Q14999 1698 aa14.12□□□□□ -0.15
CDC42BPA-210ENST00000462553 MAPKBP1O60336 1514 aa14.09□□□□□ -0.15
CDC42BPA-210ENST00000462553 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
CDC42BPA-210ENST00000462553 JPH4Q96JJ6 628 aa14.08□□□□□ -0.16
CDC42BPA-210ENST00000462553 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
CDC42BPA-210ENST00000462553 ABCC10Q5T3U5 1492 aa14.05□□□□□ -0.16
CDC42BPA-210ENST00000462553 IGF1RP08069 1367 aa14.04□□□□□ -0.16
CDC42BPA-210ENST00000462553 KIF27Q86VH2 1401 aa14.02□□□□□ -0.16
CDC42BPA-210ENST00000462553 TSPOAP1O95153 1857 aa14□□□□□ -0.17
CDC42BPA-210ENST00000462553 IQGAP2Q13576 1575 aa13.96□□□□□ -0.18
CDC42BPA-210ENST00000462553 KDM6BO15054 1643 aa13.95□□□□□ -0.18
CDC42BPA-210ENST00000462553 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
CDC42BPA-210ENST00000462553 PPRC1Q5VV67 1664 aaKnown RBP13.94□□□□□ -0.18
CDC42BPA-210ENST00000462553 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
CDC42BPA-210ENST00000462553 ABCC2Q92887 1545 aa13.9□□□□□ -0.18
CDC42BPA-210ENST00000462553 DISP1Q96F81 1524 aa13.9□□□□□ -0.19
CDC42BPA-210ENST00000462553 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDC42BPA-210ENST00000462553 PTPRGP23470 1445 aa13.89□□□□□ -0.19
CDC42BPA-210ENST00000462553 TNIKQ9UKE5 1360 aa13.88□□□□□ -0.19
CDC42BPA-210ENST00000462553 GLI2P10070 1586 aa13.88□□□□□ -0.19
CDC42BPA-210ENST00000462553 UHRF1BP1LA0JNW5 1464 aa13.87□□□□□ -0.19
CDC42BPA-210ENST00000462553 CARMIL2Q6F5E8 1435 aa13.86□□□□□ -0.19
CDC42BPA-210ENST00000462553 KIAA0556O60303 1618 aa13.86□□□□□ -0.19
CDC42BPA-210ENST00000462553 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
CDC42BPA-210ENST00000462553 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
CDC42BPA-210ENST00000462553 ZCCHC11Q5TAX3 1644 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-210ENST00000462553 MAP3K4Q9Y6R4 1608 aa13.83□□□□□ -0.2
CDC42BPA-210ENST00000462553 ASXL2Q76L83 1435 aa13.83□□□□□ -0.2
CDC42BPA-210ENST00000462553 PLB1Q6P1J6 1458 aa13.82□□□□□ -0.2
CDC42BPA-210ENST00000462553 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
CDC42BPA-210ENST00000462553 KDM5BQ9UGL1 1544 aa13.81□□□□□ -0.2
CDC42BPA-210ENST00000462553 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
CDC42BPA-210ENST00000462553 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPA-210ENST00000462553 EPRSP07814 1512 aaKnown RBP13.79□□□□□ -0.2
CDC42BPA-210ENST00000462553 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
CDC42BPA-210ENST00000462553 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPA-210ENST00000462553 ABCA8O94911 1581 aa13.72□□□□□ -0.21
CDC42BPA-210ENST00000462553 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
CDC42BPA-210ENST00000462553 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
CDC42BPA-210ENST00000462553 ADGRL1O94910 1474 aa13.7□□□□□ -0.22
CDC42BPA-210ENST00000462553 TEX14Q8IWB6 1497 aa13.69□□□□□ -0.22
CDC42BPA-210ENST00000462553 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
CDC42BPA-210ENST00000462553 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
CDC42BPA-210ENST00000462553 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
CDC42BPA-210ENST00000462553 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
CDC42BPA-210ENST00000462553 KIF21BO75037 1637 aa13.59□□□□□ -0.23
CDC42BPA-210ENST00000462553 HECW2Q9P2P5 1572 aa13.58□□□□□ -0.23
CDC42BPA-210ENST00000462553 CD109Q6YHK3 1445 aa13.58□□□□□ -0.24
CDC42BPA-210ENST00000462553 ABCA9Q8IUA7 1624 aa13.57□□□□□ -0.24
CDC42BPA-210ENST00000462553 RAPGEF6Q8TEU7 1601 aa13.56□□□□□ -0.24
CDC42BPA-210ENST00000462553 ATP10BO94823 1461 aa13.55□□□□□ -0.24
CDC42BPA-210ENST00000462553 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
CDC42BPA-210ENST00000462553 FRMPD1Q5SYB0 1578 aa13.51□□□□□ -0.25
CDC42BPA-210ENST00000462553 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
CDC42BPA-210ENST00000462553 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
CDC42BPA-210ENST00000462553 ADAMTSL3P82987 1691 aa13.48□□□□□ -0.25
CDC42BPA-210ENST00000462553 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
CDC42BPA-210ENST00000462553 P3H3Q8IVL6 736 aa13.46□□□□□ -0.25
CDC42BPA-210ENST00000462553 RICTORQ6R327 1708 aa13.45□□□□□ -0.26
CDC42BPA-210ENST00000462553 NEO1Q92859 1461 aa13.44□□□□□ -0.26
CDC42BPA-210ENST00000462553 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
CDC42BPA-210ENST00000462553 FHOD3Q2V2M9 1422 aa13.44□□□□□ -0.26
CDC42BPA-210ENST00000462553 BCORL1Q5H9F3 1711 aa13.44□□□□□ -0.26
CDC42BPA-210ENST00000462553 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
CDC42BPA-210ENST00000462553 EEA1Q15075 1411 aa13.43□□□□□ -0.26
CDC42BPA-210ENST00000462553 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPA-210ENST00000462553 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
CDC42BPA-210ENST00000462553 ARHGEF40Q8TER5 1519 aa13.42□□□□□ -0.26
CDC42BPA-210ENST00000462553 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
CDC42BPA-210ENST00000462553 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
CDC42BPA-210ENST00000462553 EFCAB5A4FU69 1503 aa13.41□□□□□ -0.26
CDC42BPA-210ENST00000462553 MADDQ8WXG6 1647 aa13.41□□□□□ -0.26
CDC42BPA-210ENST00000462553 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
CDC42BPA-210ENST00000462553 CFAP74Q9C0B2 1584 aa13.39□□□□□ -0.27
CDC42BPA-210ENST00000462553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDC42BPA-210ENST00000462553 PTPRMP28827 1452 aa13.38□□□□□ -0.27
CDC42BPA-210ENST00000462553 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-210ENST00000462553 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
CDC42BPA-210ENST00000462553 RAPGEF3O95398 923 aa13.36□□□□□ -0.27
CDC42BPA-210ENST00000462553 RIMS1Q86UR5 1692 aaKnown RBP13.36□□□□□ -0.27
CDC42BPA-210ENST00000462553 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
CDC42BPA-210ENST00000462553 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
CDC42BPA-210ENST00000462553 FANCAO15360 1455 aa13.33□□□□□ -0.28
CDC42BPA-210ENST00000462553 LRRIQ1Q96JM4 1722 aa13.32□□□□□ -0.28
CDC42BPA-210ENST00000462553 PCF11O94913 1555 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-210ENST00000462553 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
CDC42BPA-210ENST00000462553 DENND4BO75064 1496 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-210ENST00000462553 MYO5CQ9NQX4 1742 aa13.31□□□□□ -0.28
CDC42BPA-210ENST00000462553 RANGAP1P46060 587 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms