RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 JPH4Q96JJ6 628 aa31.3■■■□□ 2.6
CDKN1A-206ENST00000462537 PRG4Q92954 1404 aaPredicted RBP31.3■■■□□ 2.6
CDKN1A-206ENST00000462537 KIAA0586Q9BVV6 1533 aa31.29■■■□□ 2.6
CDKN1A-206ENST00000462537 RAPGEF2Q9Y4G8 1499 aa31.25■■■□□ 2.59
CDKN1A-206ENST00000462537 IQGAP2Q13576 1575 aa31.14■■■□□ 2.58
CDKN1A-206ENST00000462537 PRXQ9BXM0 1461 aa31.06■■■□□ 2.56
CDKN1A-206ENST00000462537 CHIC1Q5VXU3 224 aa31.05■■■□□ 2.56
CDKN1A-206ENST00000462537 CTTNBP2Q8WZ74 1663 aa31.03■■■□□ 2.56
CDKN1A-206ENST00000462537 EEA1Q15075 1411 aa31.02■■■□□ 2.56
CDKN1A-206ENST00000462537 TRHP20396 242 aaPredicted RBP31.02■■■□□ 2.56
CDKN1A-206ENST00000462537 CSRNP3Q8WYN3 585 aa31.01■■■□□ 2.55
CDKN1A-206ENST00000462537 CARMIL2Q6F5E8 1435 aa31■■■□□ 2.55
CDKN1A-206ENST00000462537 FAM9AQ8IZU1 332 aaPredicted RBP30.96■■■□□ 2.55
CDKN1A-206ENST00000462537 UGGT2Q9NYU1 1516 aa30.93■■■□□ 2.54
CDKN1A-206ENST00000462537 TTBK1Q5TCY1 1321 aaPredicted RBP30.92■■■□□ 2.54
CDKN1A-206ENST00000462537 TNIKQ9UKE5 1360 aa30.89■■■□□ 2.54
CDKN1A-206ENST00000462537 PTPRGP23470 1445 aa30.89■■■□□ 2.53
CDKN1A-206ENST00000462537 DISP1Q96F81 1524 aa30.88■■■□□ 2.53
CDKN1A-206ENST00000462537 ADCY10Q96PN6 1610 aa30.85■■■□□ 2.53
CDKN1A-206ENST00000462537 KIAA0556O60303 1618 aa30.84■■■□□ 2.53
CDKN1A-206ENST00000462537 NPM1P06748 294 aaKnown RBP eCLIP30.8■■■□□ 2.52
CDKN1A-206ENST00000462537 GOLGA3Q08378 1498 aa30.77■■■□□ 2.52
CDKN1A-206ENST00000462537 KIF21BO75037 1637 aa30.75■■■□□ 2.51
CDKN1A-206ENST00000462537 UACAQ9BZF9 1416 aa30.66■■■□□ 2.5
CDKN1A-206ENST00000462537 MAPKBP1O60336 1514 aa30.66■■■□□ 2.5
CDKN1A-206ENST00000462537 ABCC2Q92887 1545 aa30.63■■■□□ 2.49
CDKN1A-206ENST00000462537 UHRF1BP1LA0JNW5 1464 aa30.63■■■□□ 2.49
CDKN1A-206ENST00000462537 EHMT2Q96KQ7 1210 aa30.62■■■□□ 2.49
CDKN1A-206ENST00000462537 KIF13AQ9H1H9 1805 aa30.61■■■□□ 2.49
CDKN1A-206ENST00000462537 RANGAP1P46060 587 aaPredicted RBP30.58■■■□□ 2.49
CDKN1A-206ENST00000462537 P3H3Q8IVL6 736 aa30.58■■■□□ 2.49
CDKN1A-206ENST00000462537 SAMD9Q5K651 1589 aa30.57■■■□□ 2.48
CDKN1A-206ENST00000462537 PLB1Q6P1J6 1458 aa30.54■■■□□ 2.48
CDKN1A-206ENST00000462537 ABCC10Q5T3U5 1492 aa30.53■■■□□ 2.48
CDKN1A-206ENST00000462537 UBTFP17480 764 aaKnown RBP30.52■■■□□ 2.48
CDKN1A-206ENST00000462537 DIP2BQ9P265 1576 aa30.52■■■□□ 2.48
CDKN1A-206ENST00000462537 FAM69CQ0P6D2 419 aa30.51■■■□□ 2.47
CDKN1A-206ENST00000462537 ZCCHC11Q5TAX3 1644 aaKnown RBP30.5■■■□□ 2.47
CDKN1A-206ENST00000462537 ABCA8O94911 1581 aa30.49■■■□□ 2.47
CDKN1A-206ENST00000462537 KDM5BQ9UGL1 1544 aa30.48■■■□□ 2.47
CDKN1A-206ENST00000462537 ASXL2Q76L83 1435 aa30.46■■■□□ 2.47
CDKN1A-206ENST00000462537 EFCAB5A4FU69 1503 aa30.41■■■□□ 2.46
CDKN1A-206ENST00000462537 FHOD3Q2V2M9 1422 aa30.39■■■□□ 2.46
CDKN1A-206ENST00000462537 RAPGEF6Q8TEU7 1601 aa30.35■■■□□ 2.45
CDKN1A-206ENST00000462537 TSPOAP1O95153 1857 aa30.33■■■□□ 2.45
CDKN1A-206ENST00000462537 ARID3CA6NKF2 412 aa30.3■■■□□ 2.44
CDKN1A-206ENST00000462537 GLI2P10070 1586 aa30.28■■■□□ 2.44
CDKN1A-206ENST00000462537 EPRSP07814 1512 aaKnown RBP30.28■■■□□ 2.44
CDKN1A-206ENST00000462537 WDR7Q9Y4E6 1490 aa30.28■■■□□ 2.44
CDKN1A-206ENST00000462537 ATP10BO94823 1461 aa30.22■■■□□ 2.43
CDKN1A-206ENST00000462537 ARHGAP35Q9NRY4 1499 aa30.21■■■□□ 2.43
CDKN1A-206ENST00000462537 NUP153P49790 1475 aaKnown RBP30.19■■■□□ 2.42
CDKN1A-206ENST00000462537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.18■■■□□ 2.42
CDKN1A-206ENST00000462537 HNRNPUL2Q1KMD3 747 aaKnown RBP30.18■■■□□ 2.42
CDKN1A-206ENST00000462537 KCNH8Q96L42 1107 aa30.17■■■□□ 2.42
CDKN1A-206ENST00000462537 MAP3K4Q9Y6R4 1608 aa30.17■■■□□ 2.42
CDKN1A-206ENST00000462537 PPRC1Q5VV67 1664 aaKnown RBP30.14■■■□□ 2.42
CDKN1A-206ENST00000462537 FMN1Q68DA7 1419 aa30.12■■■□□ 2.41
CDKN1A-206ENST00000462537 KDM6BO15054 1643 aa30.11■■■□□ 2.41
CDKN1A-206ENST00000462537 CFAP43Q8NDM7 1665 aa30.08■■■□□ 2.41
CDKN1A-206ENST00000462537 ATP1B4Q9UN42 357 aaPredicted RBP30.05■■■□□ 2.4
CDKN1A-206ENST00000462537 TEX14Q8IWB6 1497 aa30.05■■■□□ 2.4
CDKN1A-206ENST00000462537 HECW1Q76N89 1606 aa30.04■■■□□ 2.4
CDKN1A-206ENST00000462537 CD109Q6YHK3 1445 aa30.03■■■□□ 2.4
CDKN1A-206ENST00000462537 CLIP1P30622 1438 aa30■■■□□ 2.39
CDKN1A-206ENST00000462537 CDK13Q14004 1512 aaKnown RBP29.99■■■□□ 2.39
CDKN1A-206ENST00000462537 PLEKHD1A6NEE1 506 aa29.97■■■□□ 2.39
CDKN1A-206ENST00000462537 ABCA9Q8IUA7 1624 aa29.96■■■□□ 2.39
CDKN1A-206ENST00000462537 MAGI3Q5TCQ9 1506 aa29.95■■■□□ 2.38
CDKN1A-206ENST00000462537 PCF11O94913 1555 aaKnown RBP29.9■■■□□ 2.38
CDKN1A-206ENST00000462537 LRRIQ1Q96JM4 1722 aa29.87■■■□□ 2.37
CDKN1A-206ENST00000462537 CASKIN1Q8WXD9 1431 aa29.85■■■□□ 2.37
CDKN1A-206ENST00000462537 CEP162Q5TB80 1403 aa29.83■■■□□ 2.37
CDKN1A-206ENST00000462537 COL17A1Q9UMD9 1497 aaPredicted RBP29.82■■■□□ 2.36
CDKN1A-206ENST00000462537 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
CDKN1A-206ENST00000462537 LOC105371045A0A1W2PR82 267 aa29.81■■■□□ 2.36
CDKN1A-206ENST00000462537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.8■■■□□ 2.36
CDKN1A-206ENST00000462537 FYCO1Q9BQS8 1478 aa29.8■■■□□ 2.36
CDKN1A-206ENST00000462537 CCDC18Q5T9S5 1454 aa29.78■■■□□ 2.36
CDKN1A-206ENST00000462537 TTC37Q6PGP7 1564 aa29.77■■■□□ 2.36
CDKN1A-206ENST00000462537 KIF14Q15058 1648 aa29.72■■■□□ 2.35
CDKN1A-206ENST00000462537 TROQ12816 1431 aaPredicted RBP29.71■■■□□ 2.35
CDKN1A-206ENST00000462537 NEO1Q92859 1461 aa29.71■■■□□ 2.35
CDKN1A-206ENST00000462537 PHLDB1Q86UU1 1377 aa29.69■■■□□ 2.34
CDKN1A-206ENST00000462537 ARAP3Q8WWN8 1544 aa29.69■■■□□ 2.34
CDKN1A-206ENST00000462537 CFAP74Q9C0B2 1584 aa29.68■■■□□ 2.34
CDKN1A-206ENST00000462537 FANCAO15360 1455 aa29.65■■■□□ 2.34
CDKN1A-206ENST00000462537 MYO5CQ9NQX4 1742 aa29.65■■■□□ 2.34
CDKN1A-206ENST00000462537 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
CDKN1A-206ENST00000462537 PLCH2O75038 1416 aa29.59■■■□□ 2.33
CDKN1A-206ENST00000462537 AKNAQ7Z591 1439 aa29.59■■■□□ 2.33
CDKN1A-206ENST00000462537 RAPGEF3O95398 923 aa29.56■■■□□ 2.32
CDKN1A-206ENST00000462537 DENND4BO75064 1496 aaPredicted RBP29.52■■■□□ 2.32
CDKN1A-206ENST00000462537 FRMPD1Q5SYB0 1578 aa29.52■■■□□ 2.32
CDKN1A-206ENST00000462537 ARHGAP5Q13017 1502 aa29.51■■■□□ 2.32
CDKN1A-206ENST00000462537 ADGRL1O94910 1474 aa29.49■■■□□ 2.31
CDKN1A-206ENST00000462537 RICTORQ6R327 1708 aa29.49■■■□□ 2.31
CDKN1A-206ENST00000462537 EFCAB2Q5VUJ9 269 aa29.49■■■□□ 2.31
CDKN1A-206ENST00000462537 MTUS2Q5JR59 1369 aa29.48■■■□□ 2.31
CDKN1A-206ENST00000462537 PREX2Q70Z35 1606 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms