RNA–Protein interactions for RNA: ENST00000462323.5

MUC4-208, Transcript of mucin 4, cell surface associated, human

TSL 5

Gene MUC4, Length 16,197 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-208	ENST00000462323	EEA1	Q15075	1411 aa		7.79	□□□□□ -1.16
MUC4-208	ENST00000462323	DDX10	Q13206	875 aa	Known RBP	7.78	□□□□□ -1.16
MUC4-208	ENST00000462323	ZBTB47	Q9UFB7	747 aa	Predicted RBP	7.78	□□□□□ -1.16
MUC4-208	ENST00000462323	NPM2	Q86SE8	214 aa	Known RBP	7.77	□□□□□ -1.17
MUC4-208	ENST00000462323	IL27	Q8NEV9	243 aa		7.77	□□□□□ -1.17
MUC4-208	ENST00000462323	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	7.77	□□□□□ -1.17
MUC4-208	ENST00000462323	HAP1	P54257	671 aa	Predicted RBP	7.77	□□□□□ -1.17
MUC4-208	ENST00000462323	ANP32A	P39687	249 aa	Known RBP	7.77	□□□□□ -1.17
MUC4-208	ENST00000462323	NEFM	P07197	916 aa		7.76	□□□□□ -1.17
MUC4-208	ENST00000462323	CNGB1	Q14028	1251 aa	Predicted RBP	7.76	□□□□□ -1.17
MUC4-208	ENST00000462323	ANP32B	Q92688	251 aa	Known RBP	7.76	□□□□□ -1.17
MUC4-208	ENST00000462323	PTMS	P20962	102 aa		7.76	□□□□□ -1.17
MUC4-208	ENST00000462323	NOP58	Q9Y2X3	529 aa	Known RBP	7.75	□□□□□ -1.17
MUC4-208	ENST00000462323	CLIP1	P30622	1438 aa		7.74	□□□□□ -1.17
MUC4-208	ENST00000462323	DHX37	Q8IY37	1157 aa	Known RBP	7.74	□□□□□ -1.17
MUC4-208	ENST00000462323	FANCI	Q9NVI1	1328 aa		7.73	□□□□□ -1.17
MUC4-208	ENST00000462323	CHMP4A	Q9BY43	222 aa		7.73	□□□□□ -1.17
MUC4-208	ENST00000462323	ABCC9	O60706	1549 aa		7.72	□□□□□ -1.17
MUC4-208	ENST00000462323	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.71	□□□□□ -1.17
MUC4-208	ENST00000462323	TONSL	Q96HA7	1378 aa		7.71	□□□□□ -1.18
MUC4-208	ENST00000462323	CEP162	Q5TB80	1403 aa		7.71	□□□□□ -1.18
MUC4-208	ENST00000462323	NAP1L2	Q9ULW6	460 aa	Predicted RBP	7.7	□□□□□ -1.18
MUC4-208	ENST00000462323	BRD2	P25440	801 aa	Known RBP	7.7	□□□□□ -1.18
MUC4-208	ENST00000462323	CANX	P27824	592 aa	Known RBP	7.7	□□□□□ -1.18
MUC4-208	ENST00000462323	P3H3	Q8IVL6	736 aa		7.69	□□□□□ -1.18
MUC4-208	ENST00000462323	RRP9	O43818	475 aa	Known RBP	7.69	□□□□□ -1.18
MUC4-208	ENST00000462323	AAMP	Q13685	434 aa		7.69	□□□□□ -1.18
MUC4-208	ENST00000462323	BBX	Q8WY36	941 aa	Predicted RBP	7.69	□□□□□ -1.18
MUC4-208	ENST00000462323	AEBP2	Q6ZN18	517 aa	Predicted RBP	7.68	□□□□□ -1.18
MUC4-208	ENST00000462323	CCER2	I3L3R5	266 aa		7.66	□□□□□ -1.18
MUC4-208	ENST00000462323	HSP90B1	P14625	803 aa	Known RBP	7.66	□□□□□ -1.18
MUC4-208	ENST00000462323	MRS2	Q9HD23	443 aa		7.65	□□□□□ -1.18
MUC4-208	ENST00000462323	MSH5	O43196	834 aa		7.65	□□□□□ -1.18
MUC4-208	ENST00000462323	AMER1	Q5JTC6	1135 aa	Predicted RBP	7.65	□□□□□ -1.19
MUC4-208	ENST00000462323	GOLGA3	Q08378	1498 aa		7.64	□□□□□ -1.19
MUC4-208	ENST00000462323	PPP4R2	Q9NY27	417 aa		7.63	□□□□□ -1.19
MUC4-208	ENST00000462323	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.63	□□□□□ -1.19	3e-6	■■■■■ 34.3
MUC4-208	ENST00000462323	PNN	Q9H307	717 aa	Known RBP	7.63	□□□□□ -1.19
MUC4-208	ENST00000462323	CCDC180	Q9P1Z9	1646 aa		7.63	□□□□□ -1.19
MUC4-208	ENST00000462323	SCRIB	Q14160	1630 aa		7.63	□□□□□ -1.19
MUC4-208	ENST00000462323	FAM9B	Q8IZU0	186 aa		7.62	□□□□□ -1.19
MUC4-208	ENST00000462323	SLC4A1AP	Q9BWU0	796 aa	Known RBP	7.62	□□□□□ -1.19
MUC4-208	ENST00000462323	APP	P05067	770 aa		7.62	□□□□□ -1.19
MUC4-208	ENST00000462323	USP35	Q9P2H5	1018 aa		7.61	□□□□□ -1.19
MUC4-208	ENST00000462323	PPM1G	O15355	546 aa	Predicted RBP	7.61	□□□□□ -1.19
MUC4-208	ENST00000462323	DNTTIP2	Q5QJE6	756 aa	Known RBP	7.6	□□□□□ -1.19
MUC4-208	ENST00000462323	TMC1	Q8TDI8	760 aa		7.6	□□□□□ -1.19
MUC4-208	ENST00000462323	BCCIP	Q9P287	314 aa	Known RBP eCLIP	7.6	□□□□□ -1.19
MUC4-208	ENST00000462323	BRPF3	Q9ULD4	1205 aa		7.59	□□□□□ -1.19
MUC4-208	ENST00000462323	WRN	Q14191	1432 aa	Predicted RBP eCLIP	7.59	□□□□□ -1.19
MUC4-208	ENST00000462323	CEP164	Q9UPV0	1460 aa		7.57	□□□□□ -1.2
MUC4-208	ENST00000462323	DDRGK1	Q96HY6	314 aa		7.57	□□□□□ -1.2
MUC4-208	ENST00000462323	FTSJ3	Q8IY81	847 aa	Known RBP	7.56	□□□□□ -1.2
MUC4-208	ENST00000462323	CHMP4B	Q9H444	224 aa	Known RBP	7.56	□□□□□ -1.2
MUC4-208	ENST00000462323	CHIC2	Q9UKJ5	165 aa		7.56	□□□□□ -1.2
MUC4-208	ENST00000462323	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.56	□□□□□ -1.2
MUC4-208	ENST00000462323	IPO4	Q8TEX9	1081 aa	Known RBP	7.55	□□□□□ -1.2
MUC4-208	ENST00000462323	CCNB3	Q8WWL7	1395 aa		7.55	□□□□□ -1.2
MUC4-208	ENST00000462323	RSPH4A	Q5TD94	716 aa		7.55	□□□□□ -1.2
MUC4-208	ENST00000462323	IRX6	P78412	446 aa	Predicted RBP	7.55	□□□□□ -1.2
MUC4-208	ENST00000462323	IPO9	Q96P70	1041 aa	Known RBP	7.55	□□□□□ -1.2
MUC4-208	ENST00000462323	SIN3A	Q96ST3	1273 aa		7.54	□□□□□ -1.2
MUC4-208	ENST00000462323	ZNF777	Q9ULD5	760 aa	Predicted RBP	7.54	□□□□□ -1.2
MUC4-208	ENST00000462323	PATL2	C9JE40	543 aa	Known RBP	7.54	□□□□□ -1.2
MUC4-208	ENST00000462323	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.54	□□□□□ -1.2
MUC4-208	ENST00000462323	TRIM44	Q96DX7	344 aa	Predicted RBP	7.54	□□□□□ -1.2
MUC4-208	ENST00000462323	LAS1L	Q9Y4W2	734 aa	Known RBP	7.54	□□□□□ -1.2
MUC4-208	ENST00000462323	ARID3C	A6NKF2	412 aa		7.54	□□□□□ -1.2
MUC4-208	ENST00000462323	FAM43A	Q8N2R8	423 aa		7.53	□□□□□ -1.2
MUC4-208	ENST00000462323	MTUS2	Q5JR59	1369 aa		7.53	□□□□□ -1.2
MUC4-208	ENST00000462323	RRP7BP	Q9NSQ0	103 aa		7.53	□□□□□ -1.2
MUC4-208	ENST00000462323	KIF27	Q86VH2	1401 aa		7.53	□□□□□ -1.2
MUC4-208	ENST00000462323	UPF2	Q9HAU5	1272 aa	Known RBP	7.53	□□□□□ -1.2
MUC4-208	ENST00000462323	SOGA1	O94964	1423 aa		7.53	□□□□□ -1.2
MUC4-208	ENST00000462323	C11orf95	C9JLR9	678 aa	Predicted RBP	7.52	□□□□□ -1.21
MUC4-208	ENST00000462323	PPP1R15A	O75807	674 aa	Predicted RBP	7.52	□□□□□ -1.21
MUC4-208	ENST00000462323	KANK4	Q5T7N3	995 aa	Predicted RBP	7.52	□□□□□ -1.21
MUC4-208	ENST00000462323	VPS8	Q8N3P4	1428 aa		7.51	□□□□□ -1.21
MUC4-208	ENST00000462323	GSE1	Q14687	1217 aa		7.5	□□□□□ -1.21
MUC4-208	ENST00000462323	RB1CC1	Q8TDY2	1594 aa		7.5	□□□□□ -1.21
MUC4-208	ENST00000462323	TSPY4	P0CV99	314 aa		7.5	□□□□□ -1.21
MUC4-208	ENST00000462323	TSPY10	P0CW01	314 aa		7.5	□□□□□ -1.21
MUC4-208	ENST00000462323	PLCD3	Q8N3E9	789 aa		7.5	□□□□□ -1.21
MUC4-208	ENST00000462323	RGS3	P49796	1198 aa		7.49	□□□□□ -1.21
MUC4-208	ENST00000462323	HMGB1	P09429	215 aa	Known RBP	7.49	□□□□□ -1.21
MUC4-208	ENST00000462323	TPRN	Q4KMQ1	711 aa		7.49	□□□□□ -1.21
MUC4-208	ENST00000462323	CLGN	O14967	610 aa		7.49	□□□□□ -1.21
MUC4-208	ENST00000462323	CECR2	Q9BXF3	1484 aa		7.49	□□□□□ -1.21
MUC4-208	ENST00000462323	SETD5	Q9C0A6	1442 aa		7.49	□□□□□ -1.21
MUC4-208	ENST00000462323	TAOK2	Q9UL54	1235 aa		7.48	□□□□□ -1.21
MUC4-208	ENST00000462323	CALD1	Q05682	793 aa	Known RBP	7.48	□□□□□ -1.21
MUC4-208	ENST00000462323	FBLN2	P98095	1184 aa		7.48	□□□□□ -1.21
MUC4-208	ENST00000462323	BECN1	Q14457	450 aa		7.48	□□□□□ -1.21
MUC4-208	ENST00000462323	WDR43	Q15061	677 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
MUC4-208	ENST00000462323	L1TD1	Q5T7N2	865 aa	Known RBP	7.46	□□□□□ -1.21
MUC4-208	ENST00000462323	HSPA5	P11021	654 aa	Known RBP	7.46	□□□□□ -1.22
MUC4-208	ENST00000462323	PDCL3	Q9H2J4	239 aa		7.46	□□□□□ -1.22
MUC4-208	ENST00000462323	CDCA8	Q53HL2	280 aa		7.46	□□□□□ -1.22
MUC4-208	ENST00000462323	ARID4B	Q4LE39	1312 aa	Predicted RBP	7.45	□□□□□ -1.22
MUC4-208	ENST00000462323	WWC1	Q8IX03	1113 aa		7.45	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms