RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 NACADO15069 1562 aa12.28□□□□□ -0.44
SPTA1-202ENST00000461624 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
SPTA1-202ENST00000461624 UNC13AQ9UPW8 1703 aa12.28□□□□□ -0.44
SPTA1-202ENST00000461624 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
SPTA1-202ENST00000461624 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
SPTA1-202ENST00000461624 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
SPTA1-202ENST00000461624 BICRAQ9NZM4 1560 aa12.23□□□□□ -0.45
SPTA1-202ENST00000461624 LHX8Q68G74 356 aa12.23□□□□□ -0.45
SPTA1-202ENST00000461624 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
SPTA1-202ENST00000461624 CCDC61Q9Y6R9 512 aa12.22□□□□□ -0.45
SPTA1-202ENST00000461624 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
SPTA1-202ENST00000461624 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
SPTA1-202ENST00000461624 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
SPTA1-202ENST00000461624 NUBP1P53384 320 aa12.11□□□□□ -0.47
SPTA1-202ENST00000461624 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
SPTA1-202ENST00000461624 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.48
SPTA1-202ENST00000461624 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
SPTA1-202ENST00000461624 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
SPTA1-202ENST00000461624 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
SPTA1-202ENST00000461624 MAP3K13O43283 966 aa12.04□□□□□ -0.48
SPTA1-202ENST00000461624 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
SPTA1-202ENST00000461624 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
SPTA1-202ENST00000461624 PELP1Q8IZL8 1130 aaKnown RBP12.02□□□□□ -0.49
SPTA1-202ENST00000461624 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
SPTA1-202ENST00000461624 TIE1P35590 1138 aa12□□□□□ -0.49
SPTA1-202ENST00000461624 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
SPTA1-202ENST00000461624 C7P10643 843 aa11.99□□□□□ -0.49
SPTA1-202ENST00000461624 SHROOM4Q9ULL8 1493 aa11.99□□□□□ -0.49
SPTA1-202ENST00000461624 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
SPTA1-202ENST00000461624 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
SPTA1-202ENST00000461624 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
SPTA1-202ENST00000461624 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
SPTA1-202ENST00000461624 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
SPTA1-202ENST00000461624 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
SPTA1-202ENST00000461624 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
SPTA1-202ENST00000461624 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
SPTA1-202ENST00000461624 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
SPTA1-202ENST00000461624 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
SPTA1-202ENST00000461624 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
SPTA1-202ENST00000461624 GSE1Q14687 1217 aa11.87□□□□□ -0.51
SPTA1-202ENST00000461624 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
SPTA1-202ENST00000461624 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
SPTA1-202ENST00000461624 PYGBP11216 843 aa11.84□□□□□ -0.51
SPTA1-202ENST00000461624 IER5LQ5T953 404 aa11.83□□□□□ -0.52
SPTA1-202ENST00000461624 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
SPTA1-202ENST00000461624 MAMSTRQ6ZN01 415 aa11.81□□□□□ -0.52
SPTA1-202ENST00000461624 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
SPTA1-202ENST00000461624 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
SPTA1-202ENST00000461624 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
SPTA1-202ENST00000461624 POTEFA5A3E0 1075 aa11.77□□□□□ -0.53
SPTA1-202ENST00000461624 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
SPTA1-202ENST00000461624 SEC24BO95487 1268 aa11.76□□□□□ -0.53
SPTA1-202ENST00000461624 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
SPTA1-202ENST00000461624 CUX2O14529 1486 aa11.75□□□□□ -0.53
SPTA1-202ENST00000461624 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
SPTA1-202ENST00000461624 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
SPTA1-202ENST00000461624 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
SPTA1-202ENST00000461624 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
SPTA1-202ENST00000461624 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
SPTA1-202ENST00000461624 PLCG2P16885 1265 aa11.65□□□□□ -0.54
SPTA1-202ENST00000461624 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
SPTA1-202ENST00000461624 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.54
SPTA1-202ENST00000461624 DCAF1Q9Y4B6 1507 aa11.64□□□□□ -0.55
SPTA1-202ENST00000461624 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
SPTA1-202ENST00000461624 OCEL1Q9H607 264 aa11.6□□□□□ -0.55
SPTA1-202ENST00000461624 PSEN1P49768 467 aa11.59□□□□□ -0.55
SPTA1-202ENST00000461624 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
SPTA1-202ENST00000461624 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
SPTA1-202ENST00000461624 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
SPTA1-202ENST00000461624 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
SPTA1-202ENST00000461624 POTEMA6NI47 508 aa11.5□□□□□ -0.57
SPTA1-202ENST00000461624 ERCC6Q03468 1493 aa11.5□□□□□ -0.57
SPTA1-202ENST00000461624 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
SPTA1-202ENST00000461624 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
SPTA1-202ENST00000461624 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
SPTA1-202ENST00000461624 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
SPTA1-202ENST00000461624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
SPTA1-202ENST00000461624 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
SPTA1-202ENST00000461624 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
SPTA1-202ENST00000461624 CABP2Q9NPB3 220 aa11.44□□□□□ -0.58
SPTA1-202ENST00000461624 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
SPTA1-202ENST00000461624 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
SPTA1-202ENST00000461624 PCDH10Q9P2E7 1040 aa11.4□□□□□ -0.58
SPTA1-202ENST00000461624 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
SPTA1-202ENST00000461624 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
SPTA1-202ENST00000461624 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
SPTA1-202ENST00000461624 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
SPTA1-202ENST00000461624 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
SPTA1-202ENST00000461624 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
SPTA1-202ENST00000461624 SNPHO15079 494 aa11.34□□□□□ -0.59
SPTA1-202ENST00000461624 NESP48681 1621 aa11.34□□□□□ -0.59
SPTA1-202ENST00000461624 G3V3G9 751 aa11.31□□□□□ -0.6
SPTA1-202ENST00000461624 EFCAB3Q8N7B9 438 aa11.31□□□□□ -0.6
SPTA1-202ENST00000461624 TAOK2Q9UL54 1235 aa11.31□□□□□ -0.6
SPTA1-202ENST00000461624 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.3□□□□□ -0.6
SPTA1-202ENST00000461624 ST18O60284 1047 aa11.3□□□□□ -0.6
SPTA1-202ENST00000461624 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
SPTA1-202ENST00000461624 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
SPTA1-202ENST00000461624 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
SPTA1-202ENST00000461624 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms