RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
C9orf78-203ENST00000461539 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
C9orf78-203ENST00000461539 CEP170Q5SW79 1584 aa15.71■□□□□ 0.11
C9orf78-203ENST00000461539 JPH4Q96JJ6 628 aa15.71■□□□□ 0.11
C9orf78-203ENST00000461539 CHD1O14646 1710 aa15.68■□□□□ 0.1
C9orf78-203ENST00000461539 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
C9orf78-203ENST00000461539 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
C9orf78-203ENST00000461539 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
C9orf78-203ENST00000461539 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
C9orf78-203ENST00000461539 CLIP1P30622 1438 aa15.62■□□□□ 0.09
C9orf78-203ENST00000461539 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
C9orf78-203ENST00000461539 CARMIL2Q6F5E8 1435 aa15.59■□□□□ 0.09
C9orf78-203ENST00000461539 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.09
C9orf78-203ENST00000461539 TTBK1Q5TCY1 1321 aaPredicted RBP15.58■□□□□ 0.08
C9orf78-203ENST00000461539 ARHGAP35Q9NRY4 1499 aa15.54■□□□□ 0.08
C9orf78-203ENST00000461539 FHOD3Q2V2M9 1422 aa15.54■□□□□ 0.08
C9orf78-203ENST00000461539 DISP1Q96F81 1524 aa15.53■□□□□ 0.08
C9orf78-203ENST00000461539 CTTNBP2Q8WZ74 1663 aa15.53■□□□□ 0.08
C9orf78-203ENST00000461539 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.07
C9orf78-203ENST00000461539 PTPRGP23470 1445 aa15.5■□□□□ 0.07
C9orf78-203ENST00000461539 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
C9orf78-203ENST00000461539 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
C9orf78-203ENST00000461539 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
C9orf78-203ENST00000461539 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
C9orf78-203ENST00000461539 SAMD9Q5K651 1589 aa15.45■□□□□ 0.06
C9orf78-203ENST00000461539 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
C9orf78-203ENST00000461539 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
C9orf78-203ENST00000461539 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
C9orf78-203ENST00000461539 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
C9orf78-203ENST00000461539 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
C9orf78-203ENST00000461539 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
C9orf78-203ENST00000461539 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
C9orf78-203ENST00000461539 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
C9orf78-203ENST00000461539 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
C9orf78-203ENST00000461539 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
C9orf78-203ENST00000461539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-203ENST00000461539 APLP2Q06481 763 aa15.34■□□□□ 0.05
C9orf78-203ENST00000461539 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
C9orf78-203ENST00000461539 RIMBP3CA6NJZ7 1639 aa15.34■□□□□ 0.05
C9orf78-203ENST00000461539 RIMBP3BA6NNM3 1639 aa15.34■□□□□ 0.05
C9orf78-203ENST00000461539 RIMBP3Q9UFD9 1639 aa15.34■□□□□ 0.05
C9orf78-203ENST00000461539 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
C9orf78-203ENST00000461539 FYCO1Q9BQS8 1478 aa15.3■□□□□ 0.04
C9orf78-203ENST00000461539 ABCA8O94911 1581 aa15.29■□□□□ 0.04
C9orf78-203ENST00000461539 UHRF1BP1LA0JNW5 1464 aa15.28■□□□□ 0.04
C9orf78-203ENST00000461539 NUP153P49790 1475 aaKnown RBP15.28■□□□□ 0.04
C9orf78-203ENST00000461539 ABCC2Q92887 1545 aa15.27■□□□□ 0.04
C9orf78-203ENST00000461539 PCF11O94913 1555 aaKnown RBP15.27■□□□□ 0.03
C9orf78-203ENST00000461539 RAPGEF6Q8TEU7 1601 aa15.25■□□□□ 0.03
C9orf78-203ENST00000461539 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
C9orf78-203ENST00000461539 ATP10BO94823 1461 aa15.25■□□□□ 0.03
C9orf78-203ENST00000461539 EPRSP07814 1512 aaKnown RBP15.24■□□□□ 0.03
C9orf78-203ENST00000461539 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
C9orf78-203ENST00000461539 HECW1Q76N89 1606 aa15.23■□□□□ 0.03
C9orf78-203ENST00000461539 CCDC18Q5T9S5 1454 aa15.22■□□□□ 0.03
C9orf78-203ENST00000461539 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
C9orf78-203ENST00000461539 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
C9orf78-203ENST00000461539 KDM5BQ9UGL1 1544 aa15.21■□□□□ 0.03
C9orf78-203ENST00000461539 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
C9orf78-203ENST00000461539 ADCY10Q96PN6 1610 aa15.19■□□□□ 0.02
C9orf78-203ENST00000461539 MTUS2Q5JR59 1369 aa15.19■□□□□ 0.02
C9orf78-203ENST00000461539 KCNH8Q96L42 1107 aa15.16■□□□□ 0.02
C9orf78-203ENST00000461539 MAP3K1Q13233 1512 aa15.16■□□□□ 0.02
C9orf78-203ENST00000461539 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
C9orf78-203ENST00000461539 TIAM1Q13009 1591 aa15.14■□□□□ 0.01
C9orf78-203ENST00000461539 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
C9orf78-203ENST00000461539 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
C9orf78-203ENST00000461539 WDR7Q9Y4E6 1490 aa15.1■□□□□ 0.01
C9orf78-203ENST00000461539 MAGI3Q5TCQ9 1506 aa15.09■□□□□ 0.01
C9orf78-203ENST00000461539 ZCCHC11Q5TAX3 1644 aaKnown RBP15.09■□□□□ 0.01
C9orf78-203ENST00000461539 EHBP1L1Q8N3D4 1523 aa15.07■□□□□ 0
C9orf78-203ENST00000461539 FAM69CQ0P6D2 419 aa15.05■□□□□ -0
C9orf78-203ENST00000461539 MAPKBP1O60336 1514 aa15.05■□□□□ -0
C9orf78-203ENST00000461539 CFAP43Q8NDM7 1665 aa15.04■□□□□ -0
C9orf78-203ENST00000461539 NCOA2Q15596 1464 aa15.03■□□□□ -0
C9orf78-203ENST00000461539 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
C9orf78-203ENST00000461539 LRRIQ1Q96JM4 1722 aa15.02□□□□□ -0.01
C9orf78-203ENST00000461539 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
C9orf78-203ENST00000461539 PHLDB1Q86UU1 1377 aa15□□□□□ -0.01
C9orf78-203ENST00000461539 ABCC10Q5T3U5 1492 aa15□□□□□ -0.01
C9orf78-203ENST00000461539 CFDP1Q9UEE9 299 aaPredicted RBP14.99□□□□□ -0.01
C9orf78-203ENST00000461539 KIF14Q15058 1648 aa14.98□□□□□ -0.01
C9orf78-203ENST00000461539 CD109Q6YHK3 1445 aa14.96□□□□□ -0.01
C9orf78-203ENST00000461539 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
C9orf78-203ENST00000461539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.02
C9orf78-203ENST00000461539 MYOM3Q5VTT5 1437 aa14.95□□□□□ -0.02
C9orf78-203ENST00000461539 EFCAB2Q5VUJ9 269 aa14.95□□□□□ -0.02
C9orf78-203ENST00000461539 GPATCH8Q9UKJ3 1502 aaKnown RBP14.95□□□□□ -0.02
C9orf78-203ENST00000461539 PLCH2O75038 1416 aa14.93□□□□□ -0.02
C9orf78-203ENST00000461539 SUPT6HQ7KZ85 1726 aaKnown RBP14.93□□□□□ -0.02
C9orf78-203ENST00000461539 FAM50AQ14320 339 aaKnown RBP14.92□□□□□ -0.02
C9orf78-203ENST00000461539 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
C9orf78-203ENST00000461539 MIA2Q96PC5 1412 aa14.91□□□□□ -0.02
C9orf78-203ENST00000461539 ZNF644Q9H582 1327 aaPredicted RBP14.91□□□□□ -0.02
C9orf78-203ENST00000461539 GLI2P10070 1586 aa14.9□□□□□ -0.02
C9orf78-203ENST00000461539 TTC37Q6PGP7 1564 aa14.9□□□□□ -0.02
C9orf78-203ENST00000461539 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
C9orf78-203ENST00000461539 ARHGAP5Q13017 1502 aa14.88□□□□□ -0.03
C9orf78-203ENST00000461539 ABCA9Q8IUA7 1624 aa14.88□□□□□ -0.03
C9orf78-203ENST00000461539 RRBP1Q9P2E9 1410 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms