RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
SND1-202ENST00000461056 PIAS4Q8N2W9 510 aaPredicted RBP13.8□□□□□ -0.2
SND1-202ENST00000461056 FBLN2P98095 1184 aa13.78□□□□□ -0.2
SND1-202ENST00000461056 RAPGEF2Q9Y4G8 1499 aa13.76□□□□□ -0.21
SND1-202ENST00000461056 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
SND1-202ENST00000461056 SHROOM2Q13796 1616 aa13.72□□□□□ -0.21
SND1-202ENST00000461056 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
SND1-202ENST00000461056 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
SND1-202ENST00000461056 MSH5O43196 834 aa13.69□□□□□ -0.22
SND1-202ENST00000461056 KIF21BO75037 1637 aa13.67□□□□□ -0.22
SND1-202ENST00000461056 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
SND1-202ENST00000461056 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
SND1-202ENST00000461056 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
SND1-202ENST00000461056 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
SND1-202ENST00000461056 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
SND1-202ENST00000461056 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
SND1-202ENST00000461056 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
SND1-202ENST00000461056 UGGT2Q9NYU1 1516 aa13.61□□□□□ -0.23
SND1-202ENST00000461056 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
SND1-202ENST00000461056 PRG4Q92954 1404 aaPredicted RBP13.6□□□□□ -0.23
SND1-202ENST00000461056 DISP1Q96F81 1524 aa13.59□□□□□ -0.23
SND1-202ENST00000461056 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
SND1-202ENST00000461056 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
SND1-202ENST00000461056 KIAA0556O60303 1618 aa13.51□□□□□ -0.25
SND1-202ENST00000461056 SAMD9Q5K651 1589 aa13.5□□□□□ -0.25
SND1-202ENST00000461056 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
SND1-202ENST00000461056 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
SND1-202ENST00000461056 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
SND1-202ENST00000461056 PTPRGP23470 1445 aa13.44□□□□□ -0.26
SND1-202ENST00000461056 EFCAB5A4FU69 1503 aa13.44□□□□□ -0.26
SND1-202ENST00000461056 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
SND1-202ENST00000461056 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
SND1-202ENST00000461056 ADCY10Q96PN6 1610 aa13.4□□□□□ -0.26
SND1-202ENST00000461056 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
SND1-202ENST00000461056 ABCA8O94911 1581 aa13.4□□□□□ -0.26
SND1-202ENST00000461056 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
SND1-202ENST00000461056 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
SND1-202ENST00000461056 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
SND1-202ENST00000461056 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
SND1-202ENST00000461056 ABCC2Q92887 1545 aa13.37□□□□□ -0.27
SND1-202ENST00000461056 LOC105371045A0A1W2PR82 267 aa13.36□□□□□ -0.27
SND1-202ENST00000461056 KDM5BQ9UGL1 1544 aa13.34□□□□□ -0.27
SND1-202ENST00000461056 CLIP1P30622 1438 aa13.33□□□□□ -0.28
SND1-202ENST00000461056 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
SND1-202ENST00000461056 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
SND1-202ENST00000461056 NUP153P49790 1475 aaKnown RBP13.31□□□□□ -0.28
SND1-202ENST00000461056 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
SND1-202ENST00000461056 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
SND1-202ENST00000461056 FMN1Q68DA7 1419 aa13.27□□□□□ -0.29
SND1-202ENST00000461056 ATP10BO94823 1461 aa13.27□□□□□ -0.29
SND1-202ENST00000461056 RAPGEF6Q8TEU7 1601 aa13.27□□□□□ -0.29
SND1-202ENST00000461056 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
SND1-202ENST00000461056 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
SND1-202ENST00000461056 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
SND1-202ENST00000461056 ASXL2Q76L83 1435 aa13.23□□□□□ -0.29
SND1-202ENST00000461056 ABCC10Q5T3U5 1492 aa13.23□□□□□ -0.29
SND1-202ENST00000461056 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
SND1-202ENST00000461056 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
SND1-202ENST00000461056 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
SND1-202ENST00000461056 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
SND1-202ENST00000461056 DIP2BQ9P265 1576 aa13.2□□□□□ -0.3
SND1-202ENST00000461056 WDR7Q9Y4E6 1490 aa13.19□□□□□ -0.3
SND1-202ENST00000461056 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
SND1-202ENST00000461056 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
SND1-202ENST00000461056 GLI2P10070 1586 aa13.16□□□□□ -0.3
SND1-202ENST00000461056 VPS8Q8N3P4 1428 aa13.16□□□□□ -0.3
SND1-202ENST00000461056 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
SND1-202ENST00000461056 LRRIQ1Q96JM4 1722 aa13.15□□□□□ -0.3
SND1-202ENST00000461056 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
SND1-202ENST00000461056 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
SND1-202ENST00000461056 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
SND1-202ENST00000461056 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
SND1-202ENST00000461056 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
SND1-202ENST00000461056 FAM69CQ0P6D2 419 aa13.08□□□□□ -0.32
SND1-202ENST00000461056 MAP3K4Q9Y6R4 1608 aa13.08□□□□□ -0.32
SND1-202ENST00000461056 ABCA9Q8IUA7 1624 aa13.07□□□□□ -0.32
SND1-202ENST00000461056 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
SND1-202ENST00000461056 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
SND1-202ENST00000461056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.05□□□□□ -0.32
SND1-202ENST00000461056 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
SND1-202ENST00000461056 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
SND1-202ENST00000461056 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
SND1-202ENST00000461056 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
SND1-202ENST00000461056 KIF14Q15058 1648 aa13.03□□□□□ -0.32
SND1-202ENST00000461056 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
SND1-202ENST00000461056 CD109Q6YHK3 1445 aa13.02□□□□□ -0.33
SND1-202ENST00000461056 KCNH8Q96L42 1107 aa13.01□□□□□ -0.33
SND1-202ENST00000461056 ATP1B4Q9UN42 357 aaPredicted RBP13.01□□□□□ -0.33
SND1-202ENST00000461056 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
SND1-202ENST00000461056 ARAP3Q8WWN8 1544 aa12.99□□□□□ -0.33
SND1-202ENST00000461056 LRRC9Q6ZRR7 1453 aa12.99□□□□□ -0.33
SND1-202ENST00000461056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
SND1-202ENST00000461056 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
SND1-202ENST00000461056 CDK11AQ9UQ88 783 aaPredicted RBP12.99□□□□□ -0.33
SND1-202ENST00000461056 COL17A1Q9UMD9 1497 aaPredicted RBP12.98□□□□□ -0.33
SND1-202ENST00000461056 PLCH2O75038 1416 aa12.97□□□□□ -0.33
SND1-202ENST00000461056 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
SND1-202ENST00000461056 TEX14Q8IWB6 1497 aa12.96□□□□□ -0.34
SND1-202ENST00000461056 GPATCH8Q9UKJ3 1502 aaKnown RBP12.95□□□□□ -0.34
SND1-202ENST00000461056 NEO1Q92859 1461 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms