RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
CHRD-208ENST00000460627 EIF4G1Q04637 1599 aaKnown RBP24.24■■□□□ 1.47
CHRD-208ENST00000460627 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
CHRD-208ENST00000460627 KDM2AQ9Y2K7 1162 aa24.18■■□□□ 1.46
CHRD-208ENST00000460627 DDX10Q13206 875 aaKnown RBP24.16■■□□□ 1.46
CHRD-208ENST00000460627 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
CHRD-208ENST00000460627 CARMIL2Q6F5E8 1435 aa24.16■■□□□ 1.46
CHRD-208ENST00000460627 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
CHRD-208ENST00000460627 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
CHRD-208ENST00000460627 EIF4G2P78344 907 aaKnown RBP eCLIP24.08■■□□□ 1.45
CHRD-208ENST00000460627 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
CHRD-208ENST00000460627 FMN1Q68DA7 1419 aa24.06■■□□□ 1.44
CHRD-208ENST00000460627 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
CHRD-208ENST00000460627 CANXP27824 592 aaKnown RBP24.04■■□□□ 1.44
CHRD-208ENST00000460627 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
CHRD-208ENST00000460627 GTF3C3Q9Y5Q9 886 aa24.03■■□□□ 1.44
CHRD-208ENST00000460627 ZBTB47Q9UFB7 747 aaPredicted RBP24.03■■□□□ 1.44
CHRD-208ENST00000460627 SLC24A1O60721 1099 aa23.99■■□□□ 1.43
CHRD-208ENST00000460627 TMC1Q8TDI8 760 aa23.95■■□□□ 1.43
CHRD-208ENST00000460627 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
CHRD-208ENST00000460627 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
CHRD-208ENST00000460627 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
CHRD-208ENST00000460627 HNRNPUQ00839 825 aaKnown RBP eCLIP23.92■■□□□ 1.42
CHRD-208ENST00000460627 ARID4BQ4LE39 1312 aaPredicted RBP23.91■■□□□ 1.42
CHRD-208ENST00000460627 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
CHRD-208ENST00000460627 KANK4Q5T7N3 995 aaPredicted RBP23.87■■□□□ 1.41
CHRD-208ENST00000460627 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
CHRD-208ENST00000460627 MRS2Q9HD23 443 aa23.84■■□□□ 1.41
CHRD-208ENST00000460627 HIRIP3Q9BW71 556 aaPredicted RBP23.84■■□□□ 1.41
CHRD-208ENST00000460627 CDCA8Q53HL2 280 aa23.83■■□□□ 1.41
CHRD-208ENST00000460627 WDR43Q15061 677 aaKnown RBP eCLIP23.81■■□□□ 1.4
CHRD-208ENST00000460627 TIMELESSQ9UNS1 1208 aa23.81■■□□□ 1.4
CHRD-208ENST00000460627 EFCAB2Q5VUJ9 269 aa23.8■■□□□ 1.4
CHRD-208ENST00000460627 KANK1Q14678 1352 aa23.79■■□□□ 1.4
CHRD-208ENST00000460627 FHOD3Q2V2M9 1422 aa23.78■■□□□ 1.4
CHRD-208ENST00000460627 MYT1Q01538 1121 aa23.78■■□□□ 1.4
CHRD-208ENST00000460627 CARD11Q9BXL7 1154 aa23.78■■□□□ 1.4
CHRD-208ENST00000460627 SETD5Q9C0A6 1442 aa23.77■■□□□ 1.4
CHRD-208ENST00000460627 SIN3AQ96ST3 1273 aa23.77■■□□□ 1.4
CHRD-208ENST00000460627 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
CHRD-208ENST00000460627 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
CHRD-208ENST00000460627 MIER1Q8N108 512 aa23.69■■□□□ 1.38
CHRD-208ENST00000460627 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
CHRD-208ENST00000460627 IGF1RP08069 1367 aa23.69■■□□□ 1.38
CHRD-208ENST00000460627 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
CHRD-208ENST00000460627 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
CHRD-208ENST00000460627 CCDC18Q5T9S5 1454 aa23.67■■□□□ 1.38
CHRD-208ENST00000460627 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
CHRD-208ENST00000460627 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
CHRD-208ENST00000460627 ANKRD30AQ9BXX3 1397 aa23.65■■□□□ 1.38
CHRD-208ENST00000460627 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.38
CHRD-208ENST00000460627 CFTRP13569 1480 aa23.64■■□□□ 1.37
CHRD-208ENST00000460627 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.63■■□□□ 1.37
CHRD-208ENST00000460627 C14orf37Q86TY3 774 aa23.62■■□□□ 1.37
CHRD-208ENST00000460627 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
CHRD-208ENST00000460627 FKBP8Q14318 412 aa23.61■■□□□ 1.37
CHRD-208ENST00000460627 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
CHRD-208ENST00000460627 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
CHRD-208ENST00000460627 PKD2Q13563 968 aa23.59■■□□□ 1.37
CHRD-208ENST00000460627 DCAF11Q8TEB1 546 aa23.59■■□□□ 1.37
CHRD-208ENST00000460627 BCL11AQ9H165 835 aa23.59■■□□□ 1.37
CHRD-208ENST00000460627 PTPRGP23470 1445 aa23.58■■□□□ 1.37
CHRD-208ENST00000460627 HDGFP51858 240 aaKnown RBP23.57■■□□□ 1.36
CHRD-208ENST00000460627 GGT6Q6P531 493 aa23.57■■□□□ 1.36
CHRD-208ENST00000460627 POGKQ9P215 609 aa23.56■■□□□ 1.36
CHRD-208ENST00000460627 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
CHRD-208ENST00000460627 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
CHRD-208ENST00000460627 NUP155O75694 1391 aa23.53■■□□□ 1.36
CHRD-208ENST00000460627 MLECQ14165 292 aa23.52■■□□□ 1.36
CHRD-208ENST00000460627 MPHOSPH9Q99550 1183 aa23.51■■□□□ 1.35
CHRD-208ENST00000460627 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
CHRD-208ENST00000460627 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
CHRD-208ENST00000460627 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
CHRD-208ENST00000460627 SPAG9O60271 1321 aaKnown RBP23.48■■□□□ 1.35
CHRD-208ENST00000460627 HNRNPMP52272 730 aaKnown RBP eCLIP23.47■■□□□ 1.35
CHRD-208ENST00000460627 TMF1P82094 1093 aa23.47■■□□□ 1.35
CHRD-208ENST00000460627 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.345e-7■■■■□ 20.7
CHRD-208ENST00000460627 KIF3BO15066 747 aa23.43■■□□□ 1.34
CHRD-208ENST00000460627 ANP32AP39687 249 aaKnown RBP23.42■■□□□ 1.34
CHRD-208ENST00000460627 CCDC136Q96JN2 1154 aa23.42■■□□□ 1.34
CHRD-208ENST00000460627 GRIN2BQ13224 1484 aa23.42■■□□□ 1.34
CHRD-208ENST00000460627 FOXD1Q16676 465 aa23.39■■□□□ 1.33
CHRD-208ENST00000460627 NESP48681 1621 aa23.38■■□□□ 1.33
CHRD-208ENST00000460627 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
CHRD-208ENST00000460627 MRC2Q9UBG0 1479 aa23.37■■□□□ 1.33
CHRD-208ENST00000460627 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
CHRD-208ENST00000460627 ZBTB7CA1YPR0 619 aa23.35■■□□□ 1.33
CHRD-208ENST00000460627 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
CHRD-208ENST00000460627 PPM1GO15355 546 aaPredicted RBP23.32■■□□□ 1.32
CHRD-208ENST00000460627 HSPA5P11021 654 aaKnown RBP23.31■■□□□ 1.32
CHRD-208ENST00000460627 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
CHRD-208ENST00000460627 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
CHRD-208ENST00000460627 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
CHRD-208ENST00000460627 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
CHRD-208ENST00000460627 PLEKHG5O94827 1062 aa23.3■■□□□ 1.32
CHRD-208ENST00000460627 HAP1P54257 671 aaPredicted RBP23.3■■□□□ 1.32
CHRD-208ENST00000460627 CYB5RLQ6IPT4 315 aa23.29■■□□□ 1.32
CHRD-208ENST00000460627 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
CHRD-208ENST00000460627 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.31
CHRD-208ENST00000460627 SRPK2P78362 688 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms