RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 RIMBP3BA6NNM3 1639 aa26.64■■□□□ 1.86
YIPF3-205ENST00000460547 RIMBP3Q9UFD9 1639 aa26.64■■□□□ 1.86
YIPF3-205ENST00000460547 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
YIPF3-205ENST00000460547 IGF1RP08069 1367 aa26.6■■□□□ 1.85
YIPF3-205ENST00000460547 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
YIPF3-205ENST00000460547 UBTFP17480 764 aaKnown RBP26.57■■□□□ 1.84
YIPF3-205ENST00000460547 PRXQ9BXM0 1461 aa26.56■■□□□ 1.84
YIPF3-205ENST00000460547 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
YIPF3-205ENST00000460547 NUP160Q12769 1436 aa26.52■■□□□ 1.84
YIPF3-205ENST00000460547 HRCP23327 699 aa26.51■■□□□ 1.83
YIPF3-205ENST00000460547 CEP170Q5SW79 1584 aa26.48■■□□□ 1.83
YIPF3-205ENST00000460547 CARMIL1Q5VZK9 1371 aa26.45■■□□□ 1.83
YIPF3-205ENST00000460547 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
YIPF3-205ENST00000460547 CUL7Q14999 1698 aa26.43■■□□□ 1.82
YIPF3-205ENST00000460547 CLIP1P30622 1438 aa26.41■■□□□ 1.82
YIPF3-205ENST00000460547 JPH4Q96JJ6 628 aa26.38■■□□□ 1.81
YIPF3-205ENST00000460547 KIAA0586Q9BVV6 1533 aa26.29■■□□□ 1.8
YIPF3-205ENST00000460547 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
YIPF3-205ENST00000460547 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
YIPF3-205ENST00000460547 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
YIPF3-205ENST00000460547 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
YIPF3-205ENST00000460547 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
YIPF3-205ENST00000460547 TRHP20396 242 aaPredicted RBP26.11■■□□□ 1.77
YIPF3-205ENST00000460547 IQGAP2Q13576 1575 aa26.07■■□□□ 1.76
YIPF3-205ENST00000460547 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
YIPF3-205ENST00000460547 TTBK1Q5TCY1 1321 aaPredicted RBP26.02■■□□□ 1.76
YIPF3-205ENST00000460547 ARHGAP35Q9NRY4 1499 aa26.01■■□□□ 1.75
YIPF3-205ENST00000460547 PTPRGP23470 1445 aa25.98■■□□□ 1.75
YIPF3-205ENST00000460547 NPM1P06748 294 aaKnown RBP eCLIP25.98■■□□□ 1.75
YIPF3-205ENST00000460547 ZEB1P37275 1124 aaPredicted RBP25.96■■□□□ 1.75
YIPF3-205ENST00000460547 UGGT2Q9NYU1 1516 aa25.93■■□□□ 1.74
YIPF3-205ENST00000460547 RANGAP1P46060 587 aaPredicted RBP25.9■■□□□ 1.74
YIPF3-205ENST00000460547 APLP2Q06481 763 aa25.9■■□□□ 1.74
YIPF3-205ENST00000460547 DISP1Q96F81 1524 aa25.9■■□□□ 1.74
YIPF3-205ENST00000460547 CTTNBP2Q8WZ74 1663 aa25.89■■□□□ 1.73
YIPF3-205ENST00000460547 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.72
YIPF3-205ENST00000460547 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
YIPF3-205ENST00000460547 ADCY10Q96PN6 1610 aa25.8■■□□□ 1.72
YIPF3-205ENST00000460547 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
YIPF3-205ENST00000460547 UACAQ9BZF9 1416 aa25.77■■□□□ 1.72
YIPF3-205ENST00000460547 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
YIPF3-205ENST00000460547 UHRF1BP1LA0JNW5 1464 aa25.71■■□□□ 1.71
YIPF3-205ENST00000460547 ABCC2Q92887 1545 aa25.7■■□□□ 1.7
YIPF3-205ENST00000460547 MAPKBP1O60336 1514 aa25.69■■□□□ 1.7
YIPF3-205ENST00000460547 FAM69CQ0P6D2 419 aa25.68■■□□□ 1.7
YIPF3-205ENST00000460547 TIAM1Q13009 1591 aa25.66■■□□□ 1.7
YIPF3-205ENST00000460547 SAMD9Q5K651 1589 aa25.63■■□□□ 1.69
YIPF3-205ENST00000460547 ABCC10Q5T3U5 1492 aa25.63■■□□□ 1.69
YIPF3-205ENST00000460547 PLB1Q6P1J6 1458 aa25.63■■□□□ 1.69
YIPF3-205ENST00000460547 PCF11O94913 1555 aaKnown RBP25.62■■□□□ 1.69
YIPF3-205ENST00000460547 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
YIPF3-205ENST00000460547 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
YIPF3-205ENST00000460547 FYCO1Q9BQS8 1478 aa25.61■■□□□ 1.69
YIPF3-205ENST00000460547 RRBP1Q9P2E9 1410 aaKnown RBP25.59■■□□□ 1.69
YIPF3-205ENST00000460547 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.69
YIPF3-205ENST00000460547 FHOD3Q2V2M9 1422 aa25.58■■□□□ 1.69
YIPF3-205ENST00000460547 ASXL2Q76L83 1435 aa25.57■■□□□ 1.68
YIPF3-205ENST00000460547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.57■■□□□ 1.68
YIPF3-205ENST00000460547 CASKIN1Q8WXD9 1431 aa25.56■■□□□ 1.68
YIPF3-205ENST00000460547 CCER1Q8TC90 406 aaPredicted RBP25.55■■□□□ 1.68
YIPF3-205ENST00000460547 FMN1Q68DA7 1419 aa25.55■■□□□ 1.68
YIPF3-205ENST00000460547 ABCA8O94911 1581 aa25.54■■□□□ 1.68
YIPF3-205ENST00000460547 LRRC9Q6ZRR7 1453 aa25.52■■□□□ 1.68
YIPF3-205ENST00000460547 KIF13AQ9H1H9 1805 aa25.52■■□□□ 1.68
YIPF3-205ENST00000460547 DIP2BQ9P265 1576 aa25.51■■□□□ 1.67
YIPF3-205ENST00000460547 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
YIPF3-205ENST00000460547 ZCCHC11Q5TAX3 1644 aaKnown RBP25.48■■□□□ 1.67
YIPF3-205ENST00000460547 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
YIPF3-205ENST00000460547 KCNH8Q96L42 1107 aa25.42■■□□□ 1.66
YIPF3-205ENST00000460547 CCNB3Q8WWL7 1395 aa25.42■■□□□ 1.66
YIPF3-205ENST00000460547 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
YIPF3-205ENST00000460547 EPRSP07814 1512 aaKnown RBP25.39■■□□□ 1.66
YIPF3-205ENST00000460547 ATP10BO94823 1461 aa25.39■■□□□ 1.66
YIPF3-205ENST00000460547 RAPGEF6Q8TEU7 1601 aa25.39■■□□□ 1.65
YIPF3-205ENST00000460547 GLI2P10070 1586 aa25.37■■□□□ 1.65
YIPF3-205ENST00000460547 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
YIPF3-205ENST00000460547 NUP153P49790 1475 aaKnown RBP25.31■■□□□ 1.64
YIPF3-205ENST00000460547 TSPOAP1O95153 1857 aa25.31■■□□□ 1.64
YIPF3-205ENST00000460547 PHLDB1Q86UU1 1377 aa25.29■■□□□ 1.64
YIPF3-205ENST00000460547 PLEKHD1A6NEE1 506 aa25.29■■□□□ 1.64
YIPF3-205ENST00000460547 LRRIQ1Q96JM4 1722 aa25.27■■□□□ 1.64
YIPF3-205ENST00000460547 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
YIPF3-205ENST00000460547 HECW1Q76N89 1606 aa25.24■■□□□ 1.63
YIPF3-205ENST00000460547 CD109Q6YHK3 1445 aa25.23■■□□□ 1.63
YIPF3-205ENST00000460547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.23■■□□□ 1.63
YIPF3-205ENST00000460547 MAP3K4Q9Y6R4 1608 aa25.22■■□□□ 1.63
YIPF3-205ENST00000460547 TEX14Q8IWB6 1497 aa25.21■■□□□ 1.63
YIPF3-205ENST00000460547 EHBP1L1Q8N3D4 1523 aa25.21■■□□□ 1.63
YIPF3-205ENST00000460547 KDM6BO15054 1643 aa25.19■■□□□ 1.62
YIPF3-205ENST00000460547 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
YIPF3-205ENST00000460547 CDK11AQ9UQ88 783 aaPredicted RBP25.17■■□□□ 1.62
YIPF3-205ENST00000460547 MTUS2Q5JR59 1369 aa25.17■■□□□ 1.62
YIPF3-205ENST00000460547 PPRC1Q5VV67 1664 aaKnown RBP25.15■■□□□ 1.62
YIPF3-205ENST00000460547 MAGI3Q5TCQ9 1506 aa25.13■■□□□ 1.61
YIPF3-205ENST00000460547 SUPT6HQ7KZ85 1726 aaKnown RBP25.13■■□□□ 1.61
YIPF3-205ENST00000460547 CDK13Q14004 1512 aaKnown RBP25.13■■□□□ 1.61
YIPF3-205ENST00000460547 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
YIPF3-205ENST00000460547 FGD6Q6ZV73 1430 aa25.11■■□□□ 1.61
YIPF3-205ENST00000460547 NCOA2Q15596 1464 aa25.09■■□□□ 1.61
YIPF3-205ENST00000460547 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms