RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 JPH4Q96JJ6 628 aa21.18■□□□□ 0.98
MECP2-206ENST00000460227 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
MECP2-206ENST00000460227 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
MECP2-206ENST00000460227 KIAA0586Q9BVV6 1533 aa21.15■□□□□ 0.98
MECP2-206ENST00000460227 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
MECP2-206ENST00000460227 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
MECP2-206ENST00000460227 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
MECP2-206ENST00000460227 KIF21BO75037 1637 aa21.01■□□□□ 0.95
MECP2-206ENST00000460227 ARHGEF11O15085 1522 aa21.01■□□□□ 0.95
MECP2-206ENST00000460227 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
MECP2-206ENST00000460227 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
MECP2-206ENST00000460227 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
MECP2-206ENST00000460227 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
MECP2-206ENST00000460227 IQGAP2Q13576 1575 aa20.95■□□□□ 0.94
MECP2-206ENST00000460227 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
MECP2-206ENST00000460227 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
MECP2-206ENST00000460227 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
MECP2-206ENST00000460227 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
MECP2-206ENST00000460227 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
MECP2-206ENST00000460227 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
MECP2-206ENST00000460227 CARMIL2Q6F5E8 1435 aa20.9■□□□□ 0.94
MECP2-206ENST00000460227 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
MECP2-206ENST00000460227 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
MECP2-206ENST00000460227 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
MECP2-206ENST00000460227 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
MECP2-206ENST00000460227 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
MECP2-206ENST00000460227 PTPRGP23470 1445 aa20.83■□□□□ 0.93
MECP2-206ENST00000460227 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
MECP2-206ENST00000460227 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
MECP2-206ENST00000460227 KIAA0556O60303 1618 aa20.74■□□□□ 0.91
MECP2-206ENST00000460227 SAMD9Q5K651 1589 aa20.7■□□□□ 0.9
MECP2-206ENST00000460227 ARHGAP35Q9NRY4 1499 aa20.69■□□□□ 0.9
MECP2-206ENST00000460227 UACAQ9BZF9 1416 aa20.68■□□□□ 0.9
MECP2-206ENST00000460227 FHOD3Q2V2M9 1422 aa20.67■□□□□ 0.9
MECP2-206ENST00000460227 EFCAB5A4FU69 1503 aa20.66■□□□□ 0.9
MECP2-206ENST00000460227 CLIP1P30622 1438 aa20.65■□□□□ 0.9
MECP2-206ENST00000460227 MSH5O43196 834 aa20.63■□□□□ 0.89
MECP2-206ENST00000460227 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
MECP2-206ENST00000460227 UHRF1BP1LA0JNW5 1464 aa20.62■□□□□ 0.89
MECP2-206ENST00000460227 PLB1Q6P1J6 1458 aa20.61■□□□□ 0.89
MECP2-206ENST00000460227 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
MECP2-206ENST00000460227 ABCA8O94911 1581 aa20.55■□□□□ 0.88
MECP2-206ENST00000460227 FMN1Q68DA7 1419 aa20.55■□□□□ 0.88
MECP2-206ENST00000460227 ABCC2Q92887 1545 aa20.55■□□□□ 0.88
MECP2-206ENST00000460227 ADCY10Q96PN6 1610 aa20.54■□□□□ 0.88
MECP2-206ENST00000460227 KDM5BQ9UGL1 1544 aa20.51■□□□□ 0.87
MECP2-206ENST00000460227 ATP10BO94823 1461 aa20.49■□□□□ 0.87
MECP2-206ENST00000460227 ARID3CA6NKF2 412 aa20.48■□□□□ 0.87
MECP2-206ENST00000460227 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
MECP2-206ENST00000460227 NUP153P49790 1475 aaKnown RBP20.45■□□□□ 0.86
MECP2-206ENST00000460227 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
MECP2-206ENST00000460227 RAPGEF6Q8TEU7 1601 aa20.43■□□□□ 0.86
MECP2-206ENST00000460227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.43■□□□□ 0.86
MECP2-206ENST00000460227 HNRNPUL2Q1KMD3 747 aaKnown RBP20.43■□□□□ 0.86
MECP2-206ENST00000460227 TRHP20396 242 aaPredicted RBP20.41■□□□□ 0.86
MECP2-206ENST00000460227 PIAS4Q8N2W9 510 aaPredicted RBP20.41■□□□□ 0.86
MECP2-206ENST00000460227 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
MECP2-206ENST00000460227 MAPKBP1O60336 1514 aa20.4■□□□□ 0.86
MECP2-206ENST00000460227 PLEKHD1A6NEE1 506 aa20.39■□□□□ 0.85
MECP2-206ENST00000460227 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
MECP2-206ENST00000460227 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
MECP2-206ENST00000460227 EPRSP07814 1512 aaKnown RBP20.35■□□□□ 0.85
MECP2-206ENST00000460227 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
MECP2-206ENST00000460227 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
MECP2-206ENST00000460227 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
MECP2-206ENST00000460227 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
MECP2-206ENST00000460227 ABCC10Q5T3U5 1492 aa20.34■□□□□ 0.85
MECP2-206ENST00000460227 FYCO1Q9BQS8 1478 aa20.33■□□□□ 0.85
MECP2-206ENST00000460227 WDR7Q9Y4E6 1490 aa20.3■□□□□ 0.84
MECP2-206ENST00000460227 CDK13Q14004 1512 aaKnown RBP20.29■□□□□ 0.84
MECP2-206ENST00000460227 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
MECP2-206ENST00000460227 PCF11O94913 1555 aaKnown RBP20.28■□□□□ 0.84
MECP2-206ENST00000460227 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.84
MECP2-206ENST00000460227 CCDC18Q5T9S5 1454 aa20.25■□□□□ 0.83
MECP2-206ENST00000460227 ADRA2BP18089 450 aa20.22■□□□□ 0.83
MECP2-206ENST00000460227 GLI2P10070 1586 aa20.21■□□□□ 0.83
MECP2-206ENST00000460227 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
MECP2-206ENST00000460227 DIP2BQ9P265 1576 aa20.2■□□□□ 0.82
MECP2-206ENST00000460227 APLP2Q06481 763 aa20.17■□□□□ 0.82
MECP2-206ENST00000460227 KANK4Q5T7N3 995 aaPredicted RBP20.16■□□□□ 0.82
MECP2-206ENST00000460227 CD109Q6YHK3 1445 aa20.16■□□□□ 0.82
MECP2-206ENST00000460227 LRRIQ1Q96JM4 1722 aa20.15■□□□□ 0.82
MECP2-206ENST00000460227 MAP3K1Q13233 1512 aa20.14■□□□□ 0.81
MECP2-206ENST00000460227 MAGI3Q5TCQ9 1506 aa20.14■□□□□ 0.81
MECP2-206ENST00000460227 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
MECP2-206ENST00000460227 KIF13AQ9H1H9 1805 aa20.1■□□□□ 0.81
MECP2-206ENST00000460227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.09■□□□□ 0.81
MECP2-206ENST00000460227 TIAM1Q13009 1591 aa20.08■□□□□ 0.8
MECP2-206ENST00000460227 LRRC9Q6ZRR7 1453 aa20.07■□□□□ 0.8
MECP2-206ENST00000460227 ABCA9Q8IUA7 1624 aa20.06■□□□□ 0.8
MECP2-206ENST00000460227 PLCH2O75038 1416 aa20.06■□□□□ 0.8
MECP2-206ENST00000460227 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
MECP2-206ENST00000460227 EFCAB2Q5VUJ9 269 aa20.03■□□□□ 0.8
MECP2-206ENST00000460227 TEX14Q8IWB6 1497 aa20.01■□□□□ 0.79
MECP2-206ENST00000460227 PHLDB1Q86UU1 1377 aa20.01■□□□□ 0.79
MECP2-206ENST00000460227 KIF14Q15058 1648 aa20.01■□□□□ 0.79
MECP2-206ENST00000460227 CFAP43Q8NDM7 1665 aa20■□□□□ 0.79
MECP2-206ENST00000460227 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
MECP2-206ENST00000460227 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
MECP2-206ENST00000460227 CCNB3Q8WWL7 1395 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms