RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 JPH4Q96JJ6 628 aa29.92■■■□□ 2.38
SCARNA2-201ENST00000458748 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
SCARNA2-201ENST00000458748 PRG4Q92954 1404 aaPredicted RBP29.88■■■□□ 2.37
SCARNA2-201ENST00000458748 KIAA0586Q9BVV6 1533 aa29.86■■■□□ 2.37
SCARNA2-201ENST00000458748 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
SCARNA2-201ENST00000458748 IQGAP2Q13576 1575 aa29.63■■■□□ 2.33
SCARNA2-201ENST00000458748 CARMIL2Q6F5E8 1435 aa29.57■■■□□ 2.32
SCARNA2-201ENST00000458748 ADCY10Q96PN6 1610 aa29.49■■■□□ 2.31
SCARNA2-201ENST00000458748 PTPRGP23470 1445 aa29.48■■■□□ 2.31
SCARNA2-201ENST00000458748 NPM1P06748 294 aaKnown RBP eCLIP29.48■■■□□ 2.31
SCARNA2-201ENST00000458748 TNIKQ9UKE5 1360 aa29.48■■■□□ 2.31
SCARNA2-201ENST00000458748 PRXQ9BXM0 1461 aa29.48■■■□□ 2.31
SCARNA2-201ENST00000458748 UGGT2Q9NYU1 1516 aa29.47■■■□□ 2.31
SCARNA2-201ENST00000458748 KIF13AQ9H1H9 1805 aa29.47■■■□□ 2.31
SCARNA2-201ENST00000458748 CTTNBP2Q8WZ74 1663 aa29.45■■■□□ 2.31
SCARNA2-201ENST00000458748 DISP1Q96F81 1524 aa29.43■■■□□ 2.3
SCARNA2-201ENST00000458748 MAPKBP1O60336 1514 aa29.41■■■□□ 2.3
SCARNA2-201ENST00000458748 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
SCARNA2-201ENST00000458748 FAM69CQ0P6D2 419 aa29.39■■■□□ 2.3
SCARNA2-201ENST00000458748 EEA1Q15075 1411 aa29.37■■■□□ 2.29
SCARNA2-201ENST00000458748 ABCC10Q5T3U5 1492 aa29.37■■■□□ 2.29
SCARNA2-201ENST00000458748 CSRNP3Q8WYN3 585 aa29.36■■■□□ 2.29
SCARNA2-201ENST00000458748 KIAA0556O60303 1618 aa29.34■■■□□ 2.29
SCARNA2-201ENST00000458748 UHRF1BP1LA0JNW5 1464 aa29.3■■■□□ 2.28
SCARNA2-201ENST00000458748 DIP2BQ9P265 1576 aa29.3■■■□□ 2.28
SCARNA2-201ENST00000458748 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
SCARNA2-201ENST00000458748 ABCC2Q92887 1545 aa29.29■■■□□ 2.28
SCARNA2-201ENST00000458748 UACAQ9BZF9 1416 aa29.28■■■□□ 2.28
SCARNA2-201ENST00000458748 AEBP2Q6ZN18 517 aaPredicted RBP29.26■■■□□ 2.27
SCARNA2-201ENST00000458748 CHIC1Q5VXU3 224 aa29.19■■■□□ 2.26
SCARNA2-201ENST00000458748 KDM5BQ9UGL1 1544 aa29.15■■■□□ 2.26
SCARNA2-201ENST00000458748 PLB1Q6P1J6 1458 aa29.14■■■□□ 2.26
SCARNA2-201ENST00000458748 ASXL2Q76L83 1435 aa29.11■■■□□ 2.25
SCARNA2-201ENST00000458748 TSPOAP1O95153 1857 aa29.11■■■□□ 2.25
SCARNA2-201ENST00000458748 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
SCARNA2-201ENST00000458748 KIF21BO75037 1637 aa29.08■■■□□ 2.25
SCARNA2-201ENST00000458748 ZCCHC11Q5TAX3 1644 aaKnown RBP29.08■■■□□ 2.25
SCARNA2-201ENST00000458748 ABCA8O94911 1581 aa29.05■■■□□ 2.24
SCARNA2-201ENST00000458748 GLI2P10070 1586 aa29.05■■■□□ 2.24
SCARNA2-201ENST00000458748 SAMD9Q5K651 1589 aa29.04■■■□□ 2.24
SCARNA2-201ENST00000458748 KDM6BO15054 1643 aa29.03■■■□□ 2.24
SCARNA2-201ENST00000458748 EPRSP07814 1512 aaKnown RBP28.95■■■□□ 2.23
SCARNA2-201ENST00000458748 P3H3Q8IVL6 736 aa28.94■■■□□ 2.22
SCARNA2-201ENST00000458748 WDR7Q9Y4E6 1490 aa28.91■■■□□ 2.22
SCARNA2-201ENST00000458748 PPRC1Q5VV67 1664 aaKnown RBP28.9■■■□□ 2.22
SCARNA2-201ENST00000458748 MAP3K4Q9Y6R4 1608 aa28.88■■■□□ 2.21
SCARNA2-201ENST00000458748 EFCAB5A4FU69 1503 aa28.85■■■□□ 2.21
SCARNA2-201ENST00000458748 RAPGEF6Q8TEU7 1601 aa28.83■■■□□ 2.21
SCARNA2-201ENST00000458748 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
SCARNA2-201ENST00000458748 RANGAP1P46060 587 aaPredicted RBP28.81■■■□□ 2.2
SCARNA2-201ENST00000458748 ATP10BO94823 1461 aa28.8■■■□□ 2.2
SCARNA2-201ENST00000458748 TEX14Q8IWB6 1497 aa28.79■■■□□ 2.2
SCARNA2-201ENST00000458748 FHOD3Q2V2M9 1422 aa28.78■■■□□ 2.2
SCARNA2-201ENST00000458748 CFAP43Q8NDM7 1665 aa28.76■■■□□ 2.19
SCARNA2-201ENST00000458748 COL17A1Q9UMD9 1497 aaPredicted RBP28.75■■■□□ 2.19
SCARNA2-201ENST00000458748 KDM4FA0A1W2PPD8 638 aa28.75■■■□□ 2.19
SCARNA2-201ENST00000458748 KCNH8Q96L42 1107 aa28.73■■■□□ 2.19
SCARNA2-201ENST00000458748 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
SCARNA2-201ENST00000458748 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
SCARNA2-201ENST00000458748 NUP153P49790 1475 aaKnown RBP28.7■■■□□ 2.18
SCARNA2-201ENST00000458748 CD109Q6YHK3 1445 aa28.69■■■□□ 2.18
SCARNA2-201ENST00000458748 MAGI3Q5TCQ9 1506 aa28.69■■■□□ 2.18
SCARNA2-201ENST00000458748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.62■■■□□ 2.17
SCARNA2-201ENST00000458748 HNRNPUL2Q1KMD3 747 aaKnown RBP28.62■■■□□ 2.17
SCARNA2-201ENST00000458748 ABCA9Q8IUA7 1624 aa28.6■■■□□ 2.17
SCARNA2-201ENST00000458748 ARHGAP35Q9NRY4 1499 aa28.59■■■□□ 2.17
SCARNA2-201ENST00000458748 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
SCARNA2-201ENST00000458748 PLEKHD1A6NEE1 506 aa28.54■■■□□ 2.16
SCARNA2-201ENST00000458748 ADGRL1O94910 1474 aa28.53■■■□□ 2.16
SCARNA2-201ENST00000458748 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
SCARNA2-201ENST00000458748 HECW1Q76N89 1606 aa28.48■■■□□ 2.15
SCARNA2-201ENST00000458748 ARAP3Q8WWN8 1544 aa28.46■■■□□ 2.15
SCARNA2-201ENST00000458748 CDK13Q14004 1512 aaKnown RBP28.43■■■□□ 2.14
SCARNA2-201ENST00000458748 NEO1Q92859 1461 aa28.42■■■□□ 2.14
SCARNA2-201ENST00000458748 ATP1B4Q9UN42 357 aaPredicted RBP28.39■■■□□ 2.14
SCARNA2-201ENST00000458748 CDK11AQ9UQ88 783 aaPredicted RBP28.37■■■□□ 2.13
SCARNA2-201ENST00000458748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.37■■■□□ 2.13not detected■□□□□ 9.1
SCARNA2-201ENST00000458748 CASKIN1Q8WXD9 1431 aa28.31■■■□□ 2.12
SCARNA2-201ENST00000458748 TTC37Q6PGP7 1564 aa28.31■■■□□ 2.12
SCARNA2-201ENST00000458748 CFAP74Q9C0B2 1584 aa28.31■■■□□ 2.12
SCARNA2-201ENST00000458748 CLIP1P30622 1438 aa28.3■■■□□ 2.12
SCARNA2-201ENST00000458748 LRRIQ1Q96JM4 1722 aa28.29■■■□□ 2.12
SCARNA2-201ENST00000458748 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.11
SCARNA2-201ENST00000458748 RAPGEF3O95398 923 aa28.26■■■□□ 2.11
SCARNA2-201ENST00000458748 FANCAO15360 1455 aa28.26■■■□□ 2.11
SCARNA2-201ENST00000458748 CCDC18Q5T9S5 1454 aa28.26■■■□□ 2.11
SCARNA2-201ENST00000458748 TROQ12816 1431 aaPredicted RBP28.24■■■□□ 2.11
SCARNA2-201ENST00000458748 AKNAQ7Z591 1439 aa28.23■■■□□ 2.11
SCARNA2-201ENST00000458748 FYCO1Q9BQS8 1478 aa28.22■■■□□ 2.11
SCARNA2-201ENST00000458748 PLCH2O75038 1416 aa28.22■■■□□ 2.11
SCARNA2-201ENST00000458748 KIF14Q15058 1648 aa28.21■■■□□ 2.11
SCARNA2-201ENST00000458748 MYO5CQ9NQX4 1742 aa28.2■■■□□ 2.1
SCARNA2-201ENST00000458748 DENND4BO75064 1496 aaPredicted RBP28.19■■■□□ 2.1
SCARNA2-201ENST00000458748 FRMPD1Q5SYB0 1578 aa28.19■■■□□ 2.1
SCARNA2-201ENST00000458748 RICTORQ6R327 1708 aa28.16■■■□□ 2.1
SCARNA2-201ENST00000458748 EFCAB2Q5VUJ9 269 aa28.11■■■□□ 2.09
SCARNA2-201ENST00000458748 HECW2Q9P2P5 1572 aa28.1■■■□□ 2.09
SCARNA2-201ENST00000458748 CEP162Q5TB80 1403 aa28.09■■■□□ 2.09
SCARNA2-201ENST00000458748 ZMYM4Q5VZL5 1548 aa28.08■■■□□ 2.08
SCARNA2-201ENST00000458748 SCAPERQ9BY12 1400 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms