RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.41
TSC22D1-203ENST00000458659 LAS1LQ9Y4W2 734 aaKnown RBP17.63■□□□□ 0.41
TSC22D1-203ENST00000458659 NOP58Q9Y2X3 529 aaKnown RBP17.63■□□□□ 0.41
TSC22D1-203ENST00000458659 VPS8Q8N3P4 1428 aa17.61■□□□□ 0.41
TSC22D1-203ENST00000458659 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
TSC22D1-203ENST00000458659 PPP4R2Q9NY27 417 aa17.59■□□□□ 0.41
TSC22D1-203ENST00000458659 WIZO95785 1651 aa17.59■□□□□ 0.41
TSC22D1-203ENST00000458659 ARXQ96QS3 562 aa17.59■□□□□ 0.41
TSC22D1-203ENST00000458659 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
TSC22D1-203ENST00000458659 RRP7BPQ9NSQ0 103 aa17.55■□□□□ 0.4
TSC22D1-203ENST00000458659 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
TSC22D1-203ENST00000458659 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
TSC22D1-203ENST00000458659 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSC22D1-203ENST00000458659 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
TSC22D1-203ENST00000458659 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
TSC22D1-203ENST00000458659 NEFMP07197 916 aa17.48■□□□□ 0.39
TSC22D1-203ENST00000458659 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
TSC22D1-203ENST00000458659 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
TSC22D1-203ENST00000458659 ZNF777Q9ULD5 760 aaPredicted RBP17.41■□□□□ 0.38
TSC22D1-203ENST00000458659 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
TSC22D1-203ENST00000458659 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
TSC22D1-203ENST00000458659 MTUS2Q5JR59 1369 aa17.38■□□□□ 0.37
TSC22D1-203ENST00000458659 MSH5O43196 834 aa17.37■□□□□ 0.37
TSC22D1-203ENST00000458659 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
TSC22D1-203ENST00000458659 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
TSC22D1-203ENST00000458659 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
TSC22D1-203ENST00000458659 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
TSC22D1-203ENST00000458659 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.37
TSC22D1-203ENST00000458659 FOXD1Q16676 465 aa17.33■□□□□ 0.36
TSC22D1-203ENST00000458659 FANCIQ9NVI1 1328 aa17.31■□□□□ 0.36
TSC22D1-203ENST00000458659 ANO8Q9HCE9 1232 aaPredicted RBP17.28■□□□□ 0.36
TSC22D1-203ENST00000458659 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
TSC22D1-203ENST00000458659 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
TSC22D1-203ENST00000458659 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
TSC22D1-203ENST00000458659 RGS3P49796 1198 aa17.21■□□□□ 0.35
TSC22D1-203ENST00000458659 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
TSC22D1-203ENST00000458659 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
TSC22D1-203ENST00000458659 NACADO15069 1562 aa17.2■□□□□ 0.34
TSC22D1-203ENST00000458659 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
TSC22D1-203ENST00000458659 IL27Q8NEV9 243 aa17.16■□□□□ 0.34
TSC22D1-203ENST00000458659 DDRGK1Q96HY6 314 aa17.16■□□□□ 0.34
TSC22D1-203ENST00000458659 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
TSC22D1-203ENST00000458659 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
TSC22D1-203ENST00000458659 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
TSC22D1-203ENST00000458659 FBLN2P98095 1184 aa17.13■□□□□ 0.33
TSC22D1-203ENST00000458659 KIF21BO75037 1637 aa17.11■□□□□ 0.33
TSC22D1-203ENST00000458659 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
TSC22D1-203ENST00000458659 L3MBTL2Q969R5 705 aa17.09■□□□□ 0.33
TSC22D1-203ENST00000458659 CARD11Q9BXL7 1154 aa17.08■□□□□ 0.33
TSC22D1-203ENST00000458659 RGL3Q3MIN7 710 aa17.08■□□□□ 0.32
TSC22D1-203ENST00000458659 PRKRIP1Q9H875 184 aaPredicted RBP17.08■□□□□ 0.32
TSC22D1-203ENST00000458659 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
TSC22D1-203ENST00000458659 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.32
TSC22D1-203ENST00000458659 CC2D1BQ5T0F9 858 aaKnown RBP17.07■□□□□ 0.32
TSC22D1-203ENST00000458659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSC22D1-203ENST00000458659 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSC22D1-203ENST00000458659 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
TSC22D1-203ENST00000458659 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
TSC22D1-203ENST00000458659 NAP1L5Q96NT1 182 aaPredicted RBP17.04■□□□□ 0.32
TSC22D1-203ENST00000458659 CUX2O14529 1486 aa17.04■□□□□ 0.32
TSC22D1-203ENST00000458659 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
TSC22D1-203ENST00000458659 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
TSC22D1-203ENST00000458659 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
TSC22D1-203ENST00000458659 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
TSC22D1-203ENST00000458659 SPRYD3Q8NCJ5 442 aa17.02■□□□□ 0.32
TSC22D1-203ENST00000458659 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
TSC22D1-203ENST00000458659 PLIN1O60240 522 aa17.02■□□□□ 0.32
TSC22D1-203ENST00000458659 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.32
TSC22D1-203ENST00000458659 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
TSC22D1-203ENST00000458659 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
TSC22D1-203ENST00000458659 PDE4AP27815 886 aa17■□□□□ 0.31
TSC22D1-203ENST00000458659 WASHC2AQ641Q2 1341 aa17■□□□□ 0.31
TSC22D1-203ENST00000458659 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
TSC22D1-203ENST00000458659 MPHOSPH9Q99550 1183 aa16.99■□□□□ 0.31
TSC22D1-203ENST00000458659 PHLDB1Q86UU1 1377 aa16.99■□□□□ 0.31
TSC22D1-203ENST00000458659 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
TSC22D1-203ENST00000458659 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
TSC22D1-203ENST00000458659 SLKQ9H2G2 1235 aaPredicted RBP16.98■□□□□ 0.31
TSC22D1-203ENST00000458659 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
TSC22D1-203ENST00000458659 FHOD3Q2V2M9 1422 aa16.97■□□□□ 0.31
TSC22D1-203ENST00000458659 BRPF3Q9ULD4 1205 aa16.96■□□□□ 0.31
TSC22D1-203ENST00000458659 NEUROD2Q15784 382 aa16.94■□□□□ 0.3
TSC22D1-203ENST00000458659 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
TSC22D1-203ENST00000458659 AKNAQ7Z591 1439 aa16.93■□□□□ 0.3
TSC22D1-203ENST00000458659 BECN1Q14457 450 aa16.93■□□□□ 0.3
TSC22D1-203ENST00000458659 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
TSC22D1-203ENST00000458659 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
TSC22D1-203ENST00000458659 DCAF11Q8TEB1 546 aa16.91■□□□□ 0.3
TSC22D1-203ENST00000458659 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
TSC22D1-203ENST00000458659 GSE1Q14687 1217 aa16.9■□□□□ 0.3
TSC22D1-203ENST00000458659 ANP32BQ92688 251 aaKnown RBP16.88■□□□□ 0.29
TSC22D1-203ENST00000458659 SYNJ1O43426 1573 aa16.88■□□□□ 0.29
TSC22D1-203ENST00000458659 CCDC18Q5T9S5 1454 aa16.87■□□□□ 0.29
TSC22D1-203ENST00000458659 RRP1P56182 461 aaKnown RBP16.87■□□□□ 0.29
TSC22D1-203ENST00000458659 TRIM44Q96DX7 344 aaPredicted RBP16.87■□□□□ 0.29
TSC22D1-203ENST00000458659 FMN1Q68DA7 1419 aa16.86■□□□□ 0.29
TSC22D1-203ENST00000458659 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
TSC22D1-203ENST00000458659 SKAP1Q86WV1 359 aa16.86■□□□□ 0.29
TSC22D1-203ENST00000458659 TSPY4P0CV99 314 aa16.85■□□□□ 0.29
TSC22D1-203ENST00000458659 TSPY10P0CW01 314 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms