RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PRG4Q92954 1404 aaPredicted RBP30.37■■■□□ 2.45
PDLIM2-215ENST00000456545 KIAA0586Q9BVV6 1533 aa30.35■■■□□ 2.45
PDLIM2-215ENST00000456545 ERCC6L2Q5T890 1561 aa30.35■■■□□ 2.45
PDLIM2-215ENST00000456545 RAPGEF2Q9Y4G8 1499 aa30.33■■■□□ 2.45
PDLIM2-215ENST00000456545 TRHP20396 242 aaPredicted RBP30.22■■■□□ 2.43
PDLIM2-215ENST00000456545 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
PDLIM2-215ENST00000456545 CSRNP3Q8WYN3 585 aa30.21■■■□□ 2.43
PDLIM2-215ENST00000456545 FAM9AQ8IZU1 332 aaPredicted RBP30.16■■■□□ 2.42
PDLIM2-215ENST00000456545 IQGAP2Q13576 1575 aa30.15■■■□□ 2.42
PDLIM2-215ENST00000456545 EEA1Q15075 1411 aa30.13■■■□□ 2.41
PDLIM2-215ENST00000456545 CARMIL2Q6F5E8 1435 aa30.13■■■□□ 2.41
PDLIM2-215ENST00000456545 TTBK1Q5TCY1 1321 aaPredicted RBP30.12■■■□□ 2.41
PDLIM2-215ENST00000456545 PRXQ9BXM0 1461 aa30.11■■■□□ 2.41
PDLIM2-215ENST00000456545 NPM1P06748 294 aaKnown RBP eCLIP30.04■■■□□ 2.4
PDLIM2-215ENST00000456545 PTPRGP23470 1445 aa30.02■■■□□ 2.4
PDLIM2-215ENST00000456545 CTTNBP2Q8WZ74 1663 aa30■■■□□ 2.39
PDLIM2-215ENST00000456545 TNIKQ9UKE5 1360 aa30■■■□□ 2.39
PDLIM2-215ENST00000456545 UGGT2Q9NYU1 1516 aa29.95■■■□□ 2.38
PDLIM2-215ENST00000456545 DISP1Q96F81 1524 aa29.91■■■□□ 2.38
PDLIM2-215ENST00000456545 GOLGA3Q08378 1498 aa29.87■■■□□ 2.37
PDLIM2-215ENST00000456545 KIAA0556O60303 1618 aa29.84■■■□□ 2.37
PDLIM2-215ENST00000456545 ADCY10Q96PN6 1610 aa29.83■■■□□ 2.37
PDLIM2-215ENST00000456545 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
PDLIM2-215ENST00000456545 RANGAP1P46060 587 aaPredicted RBP29.8■■■□□ 2.36
PDLIM2-215ENST00000456545 P3H3Q8IVL6 736 aa29.77■■■□□ 2.36
PDLIM2-215ENST00000456545 UACAQ9BZF9 1416 aa29.77■■■□□ 2.36
PDLIM2-215ENST00000456545 KIF21BO75037 1637 aa29.76■■■□□ 2.35
PDLIM2-215ENST00000456545 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
PDLIM2-215ENST00000456545 UHRF1BP1LA0JNW5 1464 aa29.69■■■□□ 2.34
PDLIM2-215ENST00000456545 ABCC2Q92887 1545 aa29.68■■■□□ 2.34
PDLIM2-215ENST00000456545 FAM69CQ0P6D2 419 aa29.68■■■□□ 2.34
PDLIM2-215ENST00000456545 MAPKBP1O60336 1514 aa29.67■■■□□ 2.34
PDLIM2-215ENST00000456545 ABCC10Q5T3U5 1492 aa29.6■■■□□ 2.33
PDLIM2-215ENST00000456545 PLB1Q6P1J6 1458 aa29.6■■■□□ 2.33
PDLIM2-215ENST00000456545 KIF13AQ9H1H9 1805 aa29.57■■■□□ 2.32
PDLIM2-215ENST00000456545 SAMD9Q5K651 1589 aa29.56■■■□□ 2.32
PDLIM2-215ENST00000456545 KDM5BQ9UGL1 1544 aa29.55■■■□□ 2.32
PDLIM2-215ENST00000456545 ASXL2Q76L83 1435 aa29.54■■■□□ 2.32
PDLIM2-215ENST00000456545 ABCA8O94911 1581 aa29.51■■■□□ 2.31
PDLIM2-215ENST00000456545 ZCCHC11Q5TAX3 1644 aaKnown RBP29.5■■■□□ 2.31
PDLIM2-215ENST00000456545 DIP2BQ9P265 1576 aa29.5■■■□□ 2.31
PDLIM2-215ENST00000456545 ARID3CA6NKF2 412 aa29.48■■■□□ 2.31
PDLIM2-215ENST00000456545 FHOD3Q2V2M9 1422 aa29.47■■■□□ 2.31
PDLIM2-215ENST00000456545 EFCAB5A4FU69 1503 aa29.45■■■□□ 2.31
PDLIM2-215ENST00000456545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.43■■■□□ 2.3
PDLIM2-215ENST00000456545 HNRNPUL2Q1KMD3 747 aaKnown RBP29.43■■■□□ 2.3
PDLIM2-215ENST00000456545 KCNH8Q96L42 1107 aa29.39■■■□□ 2.3
PDLIM2-215ENST00000456545 TSPOAP1O95153 1857 aa29.38■■■□□ 2.29
PDLIM2-215ENST00000456545 RAPGEF6Q8TEU7 1601 aa29.38■■■□□ 2.29
PDLIM2-215ENST00000456545 WDR7Q9Y4E6 1490 aa29.35■■■□□ 2.29
PDLIM2-215ENST00000456545 EPRSP07814 1512 aaKnown RBP29.34■■■□□ 2.29
PDLIM2-215ENST00000456545 ATP10BO94823 1461 aa29.33■■■□□ 2.29
PDLIM2-215ENST00000456545 GLI2P10070 1586 aa29.32■■■□□ 2.28
PDLIM2-215ENST00000456545 ATP1B4Q9UN42 357 aaPredicted RBP29.32■■■□□ 2.28
PDLIM2-215ENST00000456545 ARHGAP35Q9NRY4 1499 aa29.28■■■□□ 2.28
PDLIM2-215ENST00000456545 FMN1Q68DA7 1419 aa29.25■■■□□ 2.27
PDLIM2-215ENST00000456545 NUP153P49790 1475 aaKnown RBP29.23■■■□□ 2.27
PDLIM2-215ENST00000456545 PLEKHD1A6NEE1 506 aa29.21■■■□□ 2.27
PDLIM2-215ENST00000456545 MAP3K4Q9Y6R4 1608 aa29.18■■■□□ 2.26
PDLIM2-215ENST00000456545 CD109Q6YHK3 1445 aa29.16■■■□□ 2.26
PDLIM2-215ENST00000456545 KDM6BO15054 1643 aa29.15■■■□□ 2.26
PDLIM2-215ENST00000456545 TEX14Q8IWB6 1497 aa29.15■■■□□ 2.26
PDLIM2-215ENST00000456545 CLIP1P30622 1438 aa29.13■■■□□ 2.25
PDLIM2-215ENST00000456545 PPRC1Q5VV67 1664 aaKnown RBP29.11■■■□□ 2.25
PDLIM2-215ENST00000456545 CFAP43Q8NDM7 1665 aa29.11■■■□□ 2.25
PDLIM2-215ENST00000456545 HECW1Q76N89 1606 aa29.09■■■□□ 2.25
PDLIM2-215ENST00000456545 CDK11AQ9UQ88 783 aaPredicted RBP29.08■■■□□ 2.25
PDLIM2-215ENST00000456545 LOC105371045A0A1W2PR82 267 aa29.05■■■□□ 2.24
PDLIM2-215ENST00000456545 CDK13Q14004 1512 aaKnown RBP29.04■■■□□ 2.24
PDLIM2-215ENST00000456545 MAGI3Q5TCQ9 1506 aa29.03■■■□□ 2.24
PDLIM2-215ENST00000456545 ABCA9Q8IUA7 1624 aa28.99■■■□□ 2.23
PDLIM2-215ENST00000456545 CASKIN1Q8WXD9 1431 aa28.96■■■□□ 2.23
PDLIM2-215ENST00000456545 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
PDLIM2-215ENST00000456545 PCF11O94913 1555 aaKnown RBP28.92■■■□□ 2.22
PDLIM2-215ENST00000456545 COL17A1Q9UMD9 1497 aaPredicted RBP28.9■■■□□ 2.22
PDLIM2-215ENST00000456545 CCDC18Q5T9S5 1454 aa28.88■■■□□ 2.21
PDLIM2-215ENST00000456545 PHLDB1Q86UU1 1377 aa28.88■■■□□ 2.21
PDLIM2-215ENST00000456545 FYCO1Q9BQS8 1478 aa28.87■■■□□ 2.21
PDLIM2-215ENST00000456545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.86■■■□□ 2.21
PDLIM2-215ENST00000456545 LRRIQ1Q96JM4 1722 aa28.84■■■□□ 2.21
PDLIM2-215ENST00000456545 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
PDLIM2-215ENST00000456545 TROQ12816 1431 aaPredicted RBP28.83■■■□□ 2.21
PDLIM2-215ENST00000456545 NEO1Q92859 1461 aa28.81■■■□□ 2.2
PDLIM2-215ENST00000456545 TTC37Q6PGP7 1564 aa28.79■■■□□ 2.2
PDLIM2-215ENST00000456545 ARAP3Q8WWN8 1544 aa28.79■■■□□ 2.2
PDLIM2-215ENST00000456545 KIF14Q15058 1648 aa28.77■■■□□ 2.2
PDLIM2-215ENST00000456545 FANCAO15360 1455 aa28.76■■■□□ 2.19
PDLIM2-215ENST00000456545 RAPGEF3O95398 923 aa28.74■■■□□ 2.19
PDLIM2-215ENST00000456545 PLCH2O75038 1416 aa28.73■■■□□ 2.19
PDLIM2-215ENST00000456545 EFCAB2Q5VUJ9 269 aa28.73■■■□□ 2.19
PDLIM2-215ENST00000456545 AKNAQ7Z591 1439 aa28.73■■■□□ 2.19
PDLIM2-215ENST00000456545 CFAP74Q9C0B2 1584 aa28.72■■■□□ 2.19
PDLIM2-215ENST00000456545 MYO5CQ9NQX4 1742 aa28.69■■■□□ 2.18
PDLIM2-215ENST00000456545 DENND4BO75064 1496 aaPredicted RBP28.66■■■□□ 2.18
PDLIM2-215ENST00000456545 MTUS2Q5JR59 1369 aa28.66■■■□□ 2.18
PDLIM2-215ENST00000456545 ARHGAP5Q13017 1502 aa28.63■■■□□ 2.17
PDLIM2-215ENST00000456545 ADGRL1O94910 1474 aa28.6■■■□□ 2.17
PDLIM2-215ENST00000456545 SCAPERQ9BY12 1400 aa28.6■■■□□ 2.17
PDLIM2-215ENST00000456545 VPS8Q8N3P4 1428 aa28.59■■■□□ 2.17
PDLIM2-215ENST00000456545 KDM4FA0A1W2PPD8 638 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms